RNA–Protein interactions for RNA: ENST00000422933.5

HDLBP-209, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-209ENST00000422933 KNSTRNQ9Y448 316 aa13.68□□□□□ -0.22
HDLBP-209ENST00000422933 TTC21AQ8NDW8 1320 aa13.67□□□□□ -0.22
HDLBP-209ENST00000422933 XPCQ01831 940 aaPredicted RBP13.67□□□□□ -0.22
HDLBP-209ENST00000422933 PANK3Q9H999 370 aa13.67□□□□□ -0.22
HDLBP-209ENST00000422933 SOS2Q07890 1332 aaPredicted RBP13.66□□□□□ -0.22
HDLBP-209ENST00000422933 CPSF1Q10570 1443 aaKnown RBP13.66□□□□□ -0.22
HDLBP-209ENST00000422933 HAP1P54257 671 aaPredicted RBP13.66□□□□□ -0.22
HDLBP-209ENST00000422933 ABTB2Q8N961 1025 aa13.66□□□□□ -0.22
HDLBP-209ENST00000422933 DDX17Q92841 729 aaKnown RBP13.66□□□□□ -0.22
HDLBP-209ENST00000422933 A0A1W2PP64 1363 aa13.66□□□□□ -0.22
HDLBP-209ENST00000422933 SBNO1A3KN83 1393 aa13.66□□□□□ -0.22
HDLBP-209ENST00000422933 ARHGEF10O15013 1369 aa13.66□□□□□ -0.22
HDLBP-209ENST00000422933 MYOM1P52179 1685 aa13.66□□□□□ -0.22
HDLBP-209ENST00000422933 CGNL1Q0VF96 1302 aa13.65□□□□□ -0.22
HDLBP-209ENST00000422933 USP6P35125 1406 aa13.65□□□□□ -0.22
HDLBP-209ENST00000422933 EDC4Q6P2E9 1401 aaKnown RBP13.65□□□□□ -0.22
HDLBP-209ENST00000422933 NLRP13Q86W25 1043 aa13.65□□□□□ -0.22
HDLBP-209ENST00000422933 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.65□□□□□ -0.224e-6■■□□□ 12.3
HDLBP-209ENST00000422933 UPF1Q92900 1129 aaKnown RBP eCLIP13.65□□□□□ -0.22
HDLBP-209ENST00000422933 MON2Q7Z3U7 1717 aa13.64□□□□□ -0.23
HDLBP-209ENST00000422933 SPATA31A6Q5VVP1 1343 aa13.64□□□□□ -0.23
HDLBP-209ENST00000422933 TTC21BQ7Z4L5 1316 aa13.64□□□□□ -0.23
HDLBP-209ENST00000422933 DDX10Q13206 875 aaKnown RBP13.63□□□□□ -0.23
HDLBP-209ENST00000422933 TNS3Q68CZ2 1445 aa13.63□□□□□ -0.23
HDLBP-209ENST00000422933 SPATA31A3Q5VYP0 1347 aa13.63□□□□□ -0.23
HDLBP-209ENST00000422933 PXDNQ92626 1479 aa13.62□□□□□ -0.23
HDLBP-209ENST00000422933 NLRP6P59044 892 aa13.62□□□□□ -0.23
HDLBP-209ENST00000422933 NSD3Q9BZ95 1437 aa13.62□□□□□ -0.23
HDLBP-209ENST00000422933 COG3Q96JB2 828 aa13.61□□□□□ -0.23
HDLBP-209ENST00000422933 CD163L1Q9NR16 1453 aa13.61□□□□□ -0.23
HDLBP-209ENST00000422933 TRPM3Q9HCF6 1732 aaPredicted RBP13.59□□□□□ -0.23
HDLBP-209ENST00000422933 KCNH5Q8NCM2 988 aa13.59□□□□□ -0.23
HDLBP-209ENST00000422933 KIF20BQ96Q89 1820 aa13.59□□□□□ -0.23
HDLBP-209ENST00000422933 NSD2O96028 1365 aa13.58□□□□□ -0.23
HDLBP-209ENST00000422933 PLEKHG5O94827 1062 aa13.58□□□□□ -0.24
HDLBP-209ENST00000422933 NUTM2GQ5VZR2 741 aa13.58□□□□□ -0.24
HDLBP-209ENST00000422933 CARD14Q9BXL6 1004 aa13.58□□□□□ -0.24
HDLBP-209ENST00000422933 RGS12O14924 1447 aa13.57□□□□□ -0.24
HDLBP-209ENST00000422933 CDK12Q9NYV4 1490 aaPredicted RBP13.57□□□□□ -0.24
HDLBP-209ENST00000422933 NUTM2BA6NNL0 878 aaPredicted RBP13.57□□□□□ -0.24
HDLBP-209ENST00000422933 NUTM2EB1AL46 878 aaPredicted RBP13.57□□□□□ -0.24
HDLBP-209ENST00000422933 NUTM2AQ8IVF1 878 aaPredicted RBP13.57□□□□□ -0.24
HDLBP-209ENST00000422933 NRKQ7Z2Y5 1582 aa13.57□□□□□ -0.24
HDLBP-209ENST00000422933 ALS2Q96Q42 1657 aa13.56□□□□□ -0.24
HDLBP-209ENST00000422933 SSH2Q76I76 1423 aa13.56□□□□□ -0.24
HDLBP-209ENST00000422933 FYB1O15117 783 aa13.56□□□□□ -0.24
HDLBP-209ENST00000422933 MEX3CQ5U5Q3 659 aaKnown RBP13.56□□□□□ -0.24
HDLBP-209ENST00000422933 ZNF772Q68DY9 489 aaPredicted RBP13.56□□□□□ -0.24
HDLBP-209ENST00000422933 MORC1Q86VD1 984 aa13.56□□□□□ -0.24
HDLBP-209ENST00000422933 NME9Q86XW9 330 aa13.56□□□□□ -0.24
HDLBP-209ENST00000422933 GGNBP2Q9H3C7 697 aa13.56□□□□□ -0.24
HDLBP-209ENST00000422933 AFF2P51816 1311 aa13.56□□□□□ -0.24
HDLBP-209ENST00000422933 PNPLA6Q8IY17 1366 aa13.56□□□□□ -0.24
HDLBP-209ENST00000422933 USP31Q70CQ4 1352 aa13.55□□□□□ -0.24
HDLBP-209ENST00000422933 PER1O15534 1290 aaPredicted RBP13.54□□□□□ -0.24
HDLBP-209ENST00000422933 CNGB1Q14028 1251 aaPredicted RBP13.54□□□□□ -0.24
HDLBP-209ENST00000422933 PIK3C2AO00443 1686 aa13.53□□□□□ -0.24
HDLBP-209ENST00000422933 GCP02774 474 aa13.53□□□□□ -0.24
HDLBP-209ENST00000422933 RXRBP28702 533 aa13.53□□□□□ -0.24
HDLBP-209ENST00000422933 CC2D1BQ5T0F9 858 aaKnown RBP13.53□□□□□ -0.24
HDLBP-209ENST00000422933 NPC1L1Q9UHC9 1359 aa13.53□□□□□ -0.24
HDLBP-209ENST00000422933 COL22A1Q8NFW1 1626 aaPredicted RBP13.53□□□□□ -0.24
HDLBP-209ENST00000422933 ZBTB7CA1YPR0 619 aa13.52□□□□□ -0.25
HDLBP-209ENST00000422933 SOX12O15370 315 aa13.52□□□□□ -0.25
HDLBP-209ENST00000422933 CABLES1Q8TDN4 633 aa13.52□□□□□ -0.25
HDLBP-209ENST00000422933 ANKRD26Q9UPS8 1709 aa13.52□□□□□ -0.25
HDLBP-209ENST00000422933 USP19O94966 1318 aa13.51□□□□□ -0.25
HDLBP-209ENST00000422933 AMER1Q5JTC6 1135 aaPredicted RBP13.51□□□□□ -0.25
HDLBP-209ENST00000422933 ANP32CO43423 234 aa13.5□□□□□ -0.25
HDLBP-209ENST00000422933 ADAMTS2O95450 1211 aa13.5□□□□□ -0.25
HDLBP-209ENST00000422933 RALBP1Q15311 655 aa13.5□□□□□ -0.25
HDLBP-209ENST00000422933 PRDM11Q9NQV5 511 aa13.5□□□□□ -0.25
HDLBP-209ENST00000422933 ZRANB1Q9UGI0 708 aa13.5□□□□□ -0.25
HDLBP-209ENST00000422933 USP54Q70EL1 1684 aa13.5□□□□□ -0.25
HDLBP-209ENST00000422933 OVOS2A0A0J9YW53 1432 aa13.49□□□□□ -0.25
HDLBP-209ENST00000422933 OVOS2Q6IE36 1432 aa13.49□□□□□ -0.25
HDLBP-209ENST00000422933 TNNT2P45379 298 aaPredicted RBP13.49□□□□□ -0.25
HDLBP-209ENST00000422933 AMPHP49418 695 aa13.49□□□□□ -0.25
HDLBP-209ENST00000422933 ZC3H6P61129 1189 aaKnown RBP13.49□□□□□ -0.25
HDLBP-209ENST00000422933 MARF1Q9Y4F3 1742 aaKnown RBP13.49□□□□□ -0.25
HDLBP-209ENST00000422933 PHRF1Q9P1Y6 1649 aaKnown RBP13.49□□□□□ -0.25
HDLBP-209ENST00000422933 NGLY1Q96IV0 654 aa13.48□□□□□ -0.25
HDLBP-209ENST00000422933 C8orf37Q96NL8 207 aa13.48□□□□□ -0.25
HDLBP-209ENST00000422933 MAP2P11137 1827 aaKnown RBP13.47□□□□□ -0.25
HDLBP-209ENST00000422933 SLIT3O75094 1523 aa13.47□□□□□ -0.25
HDLBP-209ENST00000422933 PPM1GO15355 546 aaPredicted RBP13.46□□□□□ -0.25
HDLBP-209ENST00000422933 EVA1CP58658 441 aa13.46□□□□□ -0.25
HDLBP-209ENST00000422933 CFAP53Q96M91 514 aa13.46□□□□□ -0.25
HDLBP-209ENST00000422933 QTRT2Q9H974 415 aaKnown RBP13.46□□□□□ -0.25
HDLBP-209ENST00000422933 ABCA3Q99758 1704 aa13.46□□□□□ -0.25
HDLBP-209ENST00000422933 CPDO75976 1380 aa13.45□□□□□ -0.26
HDLBP-209ENST00000422933 AATKQ6ZMQ8 1374 aa13.45□□□□□ -0.26
HDLBP-209ENST00000422933 DIEXFQ68CQ4 756 aaKnown RBP13.45□□□□□ -0.26
HDLBP-209ENST00000422933 KIF24Q5T7B8 1368 aa13.45□□□□□ -0.26
HDLBP-209ENST00000422933 KIAA0232Q92628 1395 aa13.45□□□□□ -0.26
HDLBP-209ENST00000422933 CRYBG1Q9Y4K1 1723 aa13.44□□□□□ -0.26
HDLBP-209ENST00000422933 SRCAPQ6ZRS2 3230 aa13.44□□□□□ -0.26
HDLBP-209ENST00000422933 RBM6P78332 1123 aaKnown RBP13.44□□□□□ -0.26
HDLBP-209ENST00000422933 ARHGEF25Q86VW2 580 aa13.44□□□□□ -0.26
HDLBP-209ENST00000422933 LTN1O94822 1766 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms