RNA–Protein interactions for RNA: ENST00000422785.7

CDCA3-202, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 2,760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-202ENST00000422785 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.91■□□□□ 0.46
CDCA3-202ENST00000422785 PLEKHG1Q9ULL1 1385 aa17.91■□□□□ 0.46
CDCA3-202ENST00000422785 KDM2BQ8NHM5 1336 aa17.91■□□□□ 0.46
CDCA3-202ENST00000422785 DIAPH1O60610 1272 aaKnown RBP17.91■□□□□ 0.46
CDCA3-202ENST00000422785 MS4A1P11836 297 aa17.91■□□□□ 0.46
CDCA3-202ENST00000422785 NUDT16Q96DE0 195 aaKnown RBP17.91■□□□□ 0.46
CDCA3-202ENST00000422785 PDE3AQ14432 1141 aa17.9■□□□□ 0.46
CDCA3-202ENST00000422785 CDC42BPGQ6DT37 1551 aa17.89■□□□□ 0.46
CDCA3-202ENST00000422785 MYH16Q9H6N6 1097 aa17.89■□□□□ 0.45
CDCA3-202ENST00000422785 CCDC61Q9Y6R9 512 aa17.89■□□□□ 0.45
CDCA3-202ENST00000422785 CENPQQ7L2Z9 268 aaPredicted RBP17.89■□□□□ 0.45
CDCA3-202ENST00000422785 PNNQ9H307 717 aaKnown RBP17.88■□□□□ 0.45
CDCA3-202ENST00000422785 LTKP29376 864 aa17.88■□□□□ 0.45
CDCA3-202ENST00000422785 ROBO2Q9HCK4 1378 aa17.88■□□□□ 0.45
CDCA3-202ENST00000422785 MAPK8IP3Q9UPT6 1336 aa17.88■□□□□ 0.45
CDCA3-202ENST00000422785 TMPOP42166 694 aaKnown RBP17.87■□□□□ 0.45
CDCA3-202ENST00000422785 RARSP54136 660 aaKnown RBP17.87■□□□□ 0.45
CDCA3-202ENST00000422785 POLKQ9UBT6 870 aa17.87■□□□□ 0.45
CDCA3-202ENST00000422785 CEBPAP49715 358 aaPredicted RBP17.87■□□□□ 0.45
CDCA3-202ENST00000422785 C3P01024 1663 aa17.87■□□□□ 0.45
CDCA3-202ENST00000422785 MON2Q7Z3U7 1717 aa17.86■□□□□ 0.45
CDCA3-202ENST00000422785 AKAP12Q02952 1782 aa17.85■□□□□ 0.45
CDCA3-202ENST00000422785 SLIT1O75093 1534 aa17.84■□□□□ 0.45
CDCA3-202ENST00000422785 FCHSD2O94868 740 aa17.84■□□□□ 0.45
CDCA3-202ENST00000422785 CANXP27824 592 aaKnown RBP17.84■□□□□ 0.45
CDCA3-202ENST00000422785 ZNF692Q9BU19 519 aaPredicted RBP17.84■□□□□ 0.45
CDCA3-202ENST00000422785 TRIM35Q9UPQ4 493 aa17.84■□□□□ 0.45
CDCA3-202ENST00000422785 EID1Q9Y6B2 187 aa17.84■□□□□ 0.45
CDCA3-202ENST00000422785 MAP2P11137 1827 aaKnown RBP17.84■□□□□ 0.45
CDCA3-202ENST00000422785 AATKQ6ZMQ8 1374 aa17.83■□□□□ 0.45
CDCA3-202ENST00000422785 ARHGAP23Q9P227 1491 aa17.83■□□□□ 0.45
CDCA3-202ENST00000422785 NME9Q86XW9 330 aa17.83■□□□□ 0.45
CDCA3-202ENST00000422785 ITSN1Q15811 1721 aa17.83■□□□□ 0.44
CDCA3-202ENST00000422785 FER1L4A9Z1Z3 1794 aa17.83■□□□□ 0.44
CDCA3-202ENST00000422785 CT47B1P0C2W7 299 aaPredicted RBP17.83■□□□□ 0.44
CDCA3-202ENST00000422785 IL16Q14005 1332 aa17.83■□□□□ 0.44
CDCA3-202ENST00000422785 PRR36Q9H6K5 1346 aa17.83■□□□□ 0.44
CDCA3-202ENST00000422785 NCKAP5LQ9HCH0 1330 aa17.83■□□□□ 0.44
CDCA3-202ENST00000422785 PDE4AP27815 886 aa17.82■□□□□ 0.44
CDCA3-202ENST00000422785 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.82■□□□□ 0.44
CDCA3-202ENST00000422785 FBLN1P23142 703 aa17.81■□□□□ 0.44
CDCA3-202ENST00000422785 PPM1GO15355 546 aaPredicted RBP17.81■□□□□ 0.44
CDCA3-202ENST00000422785 BACH2Q9BYV9 841 aa17.81■□□□□ 0.44
CDCA3-202ENST00000422785 LRRC7Q96NW7 1537 aa17.8■□□□□ 0.44
CDCA3-202ENST00000422785 CDK12Q9NYV4 1490 aaPredicted RBP17.8■□□□□ 0.44
CDCA3-202ENST00000422785 RIPK4P57078 832 aa17.8■□□□□ 0.44
CDCA3-202ENST00000422785 COG3Q96JB2 828 aa17.8■□□□□ 0.44
CDCA3-202ENST00000422785 FRAT1Q92837 279 aaPredicted RBP17.8■□□□□ 0.44
CDCA3-202ENST00000422785 PTPRUQ92729 1446 aa17.8■□□□□ 0.44
CDCA3-202ENST00000422785 ANP32AP39687 249 aaKnown RBP17.79■□□□□ 0.44
CDCA3-202ENST00000422785 PANK1Q8TE04 598 aa17.79■□□□□ 0.44
CDCA3-202ENST00000422785 RSPH6AQ9H0K4 717 aa17.79■□□□□ 0.44
CDCA3-202ENST00000422785 TOPAZ1Q8N9V7 1692 aa17.79■□□□□ 0.44
CDCA3-202ENST00000422785 AAMPQ13685 434 aa17.79■□□□□ 0.44
CDCA3-202ENST00000422785 SLC26A8Q96RN1 970 aa17.79■□□□□ 0.44
CDCA3-202ENST00000422785 ZRANB1Q9UGI0 708 aa17.79■□□□□ 0.44
CDCA3-202ENST00000422785 EMILIN1Q9Y6C2 1016 aa17.79■□□□□ 0.44
CDCA3-202ENST00000422785 COG6Q9Y2V7 657 aa17.78■□□□□ 0.44
CDCA3-202ENST00000422785 TBX22Q9Y458 520 aa17.78■□□□□ 0.44
CDCA3-202ENST00000422785 THEMISQ8N1K5 641 aaPredicted RBP17.78■□□□□ 0.44
CDCA3-202ENST00000422785 SKAP1Q86WV1 359 aa17.77■□□□□ 0.44
CDCA3-202ENST00000422785 TSR2Q969E8 191 aaKnown RBP17.77■□□□□ 0.44
CDCA3-202ENST00000422785 CLUAP1Q96AJ1 413 aa17.77■□□□□ 0.44
CDCA3-202ENST00000422785 PLEKHG3A1L390 1219 aa17.77■□□□□ 0.43
CDCA3-202ENST00000422785 NEFMP07197 916 aa17.77■□□□□ 0.43
CDCA3-202ENST00000422785 PRKAR2BP31323 418 aa17.77■□□□□ 0.43
CDCA3-202ENST00000422785 IL13P35225 146 aa17.77■□□□□ 0.43
CDCA3-202ENST00000422785 ERICH6Q7L0X2 663 aa17.75■□□□□ 0.43
CDCA3-202ENST00000422785 AMOTL2Q9Y2J4 779 aa17.75■□□□□ 0.43
CDCA3-202ENST00000422785 DIP2AQ14689 1571 aa17.75■□□□□ 0.43
CDCA3-202ENST00000422785 NRKQ7Z2Y5 1582 aa17.75■□□□□ 0.43
CDCA3-202ENST00000422785 PTCH1Q13635 1447 aa17.75■□□□□ 0.43
CDCA3-202ENST00000422785 EXOSC9Q06265 439 aaKnown RBP17.75■□□□□ 0.43
CDCA3-202ENST00000422785 BCL2L13Q9BXK5 485 aa17.75■□□□□ 0.43
CDCA3-202ENST00000422785 ACEP12821 1306 aa17.74■□□□□ 0.43
CDCA3-202ENST00000422785 IPO9Q96P70 1041 aaKnown RBP17.74■□□□□ 0.43
CDCA3-202ENST00000422785 TTC21BQ7Z4L5 1316 aa17.74■□□□□ 0.43
CDCA3-202ENST00000422785 RLBP1P12271 317 aa17.73■□□□□ 0.43
CDCA3-202ENST00000422785 PLPPR3Q6T4P5 718 aa17.73■□□□□ 0.43
CDCA3-202ENST00000422785 TRHP20396 242 aaPredicted RBP17.73■□□□□ 0.43
CDCA3-202ENST00000422785 NFE2L2Q16236 605 aa17.73■□□□□ 0.43
CDCA3-202ENST00000422785 IGHDP01880 384 aa17.72■□□□□ 0.43
CDCA3-202ENST00000422785 HMOX1P09601 288 aa17.72■□□□□ 0.43
CDCA3-202ENST00000422785 USP6P35125 1406 aa17.72■□□□□ 0.43
CDCA3-202ENST00000422785 RRS1Q15050 365 aaKnown RBP17.72■□□□□ 0.43
CDCA3-202ENST00000422785 ZKSCAN2Q63HK3 967 aa17.72■□□□□ 0.43
CDCA3-202ENST00000422785 PHACTR3Q96KR7 559 aa17.72■□□□□ 0.43
CDCA3-202ENST00000422785 TNNQ9UQP3 1299 aa17.71■□□□□ 0.43
CDCA3-202ENST00000422785 NOP58Q9Y2X3 529 aaKnown RBP17.71■□□□□ 0.43
CDCA3-202ENST00000422785 OVOS2A0A0J9YW53 1432 aa17.7■□□□□ 0.42
CDCA3-202ENST00000422785 OVOS2Q6IE36 1432 aa17.7■□□□□ 0.42
CDCA3-202ENST00000422785 SMC4Q9NTJ3 1288 aa17.7■□□□□ 0.42
CDCA3-202ENST00000422785 NUTM2FA1L443 756 aa17.69■□□□□ 0.42
CDCA3-202ENST00000422785 CALD1Q05682 793 aaKnown RBP17.69■□□□□ 0.42
CDCA3-202ENST00000422785 SSH1Q8WYL5 1049 aa17.69■□□□□ 0.42
CDCA3-202ENST00000422785 SSH2Q76I76 1423 aa17.69■□□□□ 0.42
CDCA3-202ENST00000422785 PMFBP1Q8TBY8 1022 aa17.68■□□□□ 0.42
CDCA3-202ENST00000422785 MVPQ14764 893 aaKnown RBP17.68■□□□□ 0.42
CDCA3-202ENST00000422785 DZIP1LQ8IYY4 767 aaKnown RBP17.68■□□□□ 0.42
CDCA3-202ENST00000422785 XRN1Q8IZH2 1706 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms