RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 VPS72Q15906 364 aa31.26■■■□□ 2.59
TRAF4-204ENST00000422344 BLMP54132 1417 aaPredicted RBP31.25■■■□□ 2.59
TRAF4-204ENST00000422344 NBPF8Q3BBV2 869 aa31.25■■■□□ 2.59
TRAF4-204ENST00000422344 SEPT12Q8IYM1 358 aa31.25■■■□□ 2.59
TRAF4-204ENST00000422344 CCDC9Q9Y3X0 531 aaKnown RBP31.25■■■□□ 2.59
TRAF4-204ENST00000422344 ARHGEF10O15013 1369 aa31.25■■■□□ 2.59
TRAF4-204ENST00000422344 PLCH1Q4KWH8 1693 aa31.24■■■□□ 2.59
TRAF4-204ENST00000422344 SRPK2P78362 688 aaKnown RBP31.23■■■□□ 2.59
TRAF4-204ENST00000422344 ABCA3Q99758 1704 aa31.22■■■□□ 2.59
TRAF4-204ENST00000422344 NWD2Q9ULI1 1742 aa31.21■■■□□ 2.59
TRAF4-204ENST00000422344 DEFB132Q7Z7B7 95 aa31.2■■■□□ 2.59
TRAF4-204ENST00000422344 CCDC61Q9Y6R9 512 aa31.2■■■□□ 2.59
TRAF4-204ENST00000422344 PCGF6Q9BYE7 350 aa31.19■■■□□ 2.58
TRAF4-204ENST00000422344 FAM83GA6ND36 823 aa31.18■■■□□ 2.58
TRAF4-204ENST00000422344 SF3B2Q13435 895 aaKnown RBP31.18■■■□□ 2.58
TRAF4-204ENST00000422344 TOPAZ1Q8N9V7 1692 aa31.18■■■□□ 2.58
TRAF4-204ENST00000422344 TRPM3Q9HCF6 1732 aaPredicted RBP31.18■■■□□ 2.58
TRAF4-204ENST00000422344 ONECUT3O60422 494 aaPredicted RBP31.17■■■□□ 2.58
TRAF4-204ENST00000422344 PAK3O75914 559 aaPredicted RBP31.17■■■□□ 2.58
TRAF4-204ENST00000422344 CARD11Q9BXL7 1154 aa31.16■■■□□ 2.58
TRAF4-204ENST00000422344 CABP2Q9NPB3 220 aa31.15■■■□□ 2.58
TRAF4-204ENST00000422344 KRT27Q7Z3Y8 459 aa31.14■■■□□ 2.58
TRAF4-204ENST00000422344 EVC2Q86UK5 1308 aa31.14■■■□□ 2.58
TRAF4-204ENST00000422344 A0A0G2JS52 829 aa31.12■■■□□ 2.57
TRAF4-204ENST00000422344 MYT1Q01538 1121 aa31.12■■■□□ 2.57
TRAF4-204ENST00000422344 ACEP12821 1306 aa31.12■■■□□ 2.57
TRAF4-204ENST00000422344 ALS2Q96Q42 1657 aa31.12■■■□□ 2.57
TRAF4-204ENST00000422344 PLEKHG3A1L390 1219 aa31.11■■■□□ 2.57
TRAF4-204ENST00000422344 POLR3AO14802 1390 aaPredicted RBP31.11■■■□□ 2.57
TRAF4-204ENST00000422344 PPIP5K1Q6PFW1 1433 aa31.11■■■□□ 2.57
TRAF4-204ENST00000422344 BTG4Q9NY30 223 aa31.09■■■□□ 2.57
TRAF4-204ENST00000422344 NRAPQ86VF7 1730 aa31.07■■■□□ 2.56
TRAF4-204ENST00000422344 FAM98CQ17RN3 349 aaKnown RBP31.07■■■□□ 2.56
TRAF4-204ENST00000422344 COL14A1Q05707 1796 aaKnown RBP31.03■■■□□ 2.56
TRAF4-204ENST00000422344 CLSPNQ9HAW4 1339 aa31.02■■■□□ 2.56
TRAF4-204ENST00000422344 CABP1Q9NZU7 370 aa31.02■■■□□ 2.56
TRAF4-204ENST00000422344 BAG6P46379 1132 aa30.99■■■□□ 2.55
TRAF4-204ENST00000422344 SBNO2Q9Y2G9 1366 aa30.99■■■□□ 2.55
TRAF4-204ENST00000422344 NUTM2GQ5VZR2 741 aa30.97■■■□□ 2.55
TRAF4-204ENST00000422344 ABTB2Q8N961 1025 aa30.96■■■□□ 2.55
TRAF4-204ENST00000422344 SPATA31A5Q5VU36 1347 aa30.96■■■□□ 2.55
TRAF4-204ENST00000422344 SPATA31A7Q8IWB4 1347 aa30.96■■■□□ 2.55
TRAF4-204ENST00000422344 BRD4O60885 1362 aaPredicted RBP30.95■■■□□ 2.55
TRAF4-204ENST00000422344 FAM182BQ5T319 152 aa30.95■■■□□ 2.55
TRAF4-204ENST00000422344 PRDM11Q9NQV5 511 aa30.95■■■□□ 2.55
TRAF4-204ENST00000422344 CRYBG1Q9Y4K1 1723 aa30.95■■■□□ 2.54
TRAF4-204ENST00000422344 TIMELESSQ9UNS1 1208 aa30.94■■■□□ 2.54
TRAF4-204ENST00000422344 PSDA5PKW4 1024 aaPredicted RBP30.93■■■□□ 2.54
TRAF4-204ENST00000422344 USP6P35125 1406 aa30.92■■■□□ 2.54
TRAF4-204ENST00000422344 CCER1Q8TC90 406 aaPredicted RBP30.91■■■□□ 2.54
TRAF4-204ENST00000422344 PHRF1Q9P1Y6 1649 aaKnown RBP30.91■■■□□ 2.54
TRAF4-204ENST00000422344 EN1Q05925 392 aaPredicted RBP30.89■■■□□ 2.54
TRAF4-204ENST00000422344 NLRP13Q86W25 1043 aa30.88■■■□□ 2.53
TRAF4-204ENST00000422344 ZNF692Q9BU19 519 aaPredicted RBP30.88■■■□□ 2.53
TRAF4-204ENST00000422344 KIAA0232Q92628 1395 aa30.88■■■□□ 2.53
TRAF4-204ENST00000422344 LRP5O75197 1615 aa30.87■■■□□ 2.53
TRAF4-204ENST00000422344 RGPD1P0DJD0 1748 aa30.87■■■□□ 2.53
TRAF4-204ENST00000422344 CHRNA2Q15822 529 aa30.87■■■□□ 2.53
TRAF4-204ENST00000422344 THSD7AQ9UPZ6 1657 aa30.87■■■□□ 2.53
TRAF4-204ENST00000422344 ST20-MTHFSA0A0A6YYL1 179 aa30.85■■■□□ 2.53
TRAF4-204ENST00000422344 STRN4Q9NRL3 753 aa30.85■■■□□ 2.53
TRAF4-204ENST00000422344 ZC3H6P61129 1189 aaKnown RBP30.84■■■□□ 2.53
TRAF4-204ENST00000422344 USP19O94966 1318 aa30.83■■■□□ 2.53
TRAF4-204ENST00000422344 SPATA31A1Q5TZJ5 1347 aa30.83■■■□□ 2.53
TRAF4-204ENST00000422344 SLC24A1O60721 1099 aa30.83■■■□□ 2.53
TRAF4-204ENST00000422344 AKAP12Q02952 1782 aa30.82■■■□□ 2.52
TRAF4-204ENST00000422344 TMC1Q8TDI8 760 aa30.82■■■□□ 2.52
TRAF4-204ENST00000422344 KTN1Q86UP2 1357 aaKnown RBP30.81■■■□□ 2.52
TRAF4-204ENST00000422344 NRKQ7Z2Y5 1582 aa30.81■■■□□ 2.52
TRAF4-204ENST00000422344 NLRP6P59044 892 aa30.81■■■□□ 2.52
TRAF4-204ENST00000422344 USP47Q96K76 1375 aa30.8■■■□□ 2.52
TRAF4-204ENST00000422344 SSH2Q76I76 1423 aa30.8■■■□□ 2.52
TRAF4-204ENST00000422344 CPSF1Q10570 1443 aaKnown RBP30.79■■■□□ 2.52
TRAF4-204ENST00000422344 TTC21BQ7Z4L5 1316 aa30.78■■■□□ 2.52
TRAF4-204ENST00000422344 PUS7Q96PZ0 661 aaKnown RBP30.78■■■□□ 2.52
TRAF4-204ENST00000422344 TESK2Q96S53 571 aa30.78■■■□□ 2.52
TRAF4-204ENST00000422344 TNS1Q9HBL0 1735 aaKnown RBP30.78■■■□□ 2.52
TRAF4-204ENST00000422344 GCP02774 474 aa30.77■■■□□ 2.52
TRAF4-204ENST00000422344 USP35Q9P2H5 1018 aa30.77■■■□□ 2.52
TRAF4-204ENST00000422344 TTC21AQ8NDW8 1320 aa30.76■■■□□ 2.52
TRAF4-204ENST00000422344 DISP2A7MBM2 1401 aa30.76■■■□□ 2.51
TRAF4-204ENST00000422344 R3HDM1Q15032 1099 aaKnown RBP30.76■■■□□ 2.51
TRAF4-204ENST00000422344 HDGFL2Q7Z4V5 671 aaPredicted RBP30.76■■■□□ 2.51
TRAF4-204ENST00000422344 PIK3C2AO00443 1686 aa30.76■■■□□ 2.51
TRAF4-204ENST00000422344 TRIM37O94972 964 aa30.75■■■□□ 2.51
TRAF4-204ENST00000422344 EVA1CP58658 441 aa30.75■■■□□ 2.51
TRAF4-204ENST00000422344 EZH2Q15910 746 aaKnown RBP30.75■■■□□ 2.51
TRAF4-204ENST00000422344 CPDO75976 1380 aa30.75■■■□□ 2.51
TRAF4-204ENST00000422344 FAM196AQ6ZSG2 479 aa30.74■■■□□ 2.51
TRAF4-204ENST00000422344 MON2Q7Z3U7 1717 aa30.73■■■□□ 2.51
TRAF4-204ENST00000422344 TERF2IPQ9NYB0 399 aa30.73■■■□□ 2.51
TRAF4-204ENST00000422344 SLC12A5Q9H2X9 1139 aa30.72■■■□□ 2.51
TRAF4-204ENST00000422344 ZBTB7CA1YPR0 619 aa30.71■■■□□ 2.51
TRAF4-204ENST00000422344 TMF1P82094 1093 aa30.71■■■□□ 2.51
TRAF4-204ENST00000422344 SLIT3O75094 1523 aa30.71■■■□□ 2.51
TRAF4-204ENST00000422344 NINLQ9Y2I6 1382 aa30.69■■■□□ 2.5
TRAF4-204ENST00000422344 CAMKK2Q96RR4 588 aa30.69■■■□□ 2.5
TRAF4-204ENST00000422344 CD163L1Q9NR16 1453 aa30.69■■■□□ 2.5
TRAF4-204ENST00000422344 APBA3O96018 575 aa30.68■■■□□ 2.5
TRAF4-204ENST00000422344 PDE3BQ13370 1112 aa30.68■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms