RNA–Protein interactions for RNA: ENST00000421368.2

MSL3-208, Transcript of MSL complex subunit 3, humanhuman

TSL 5

Gene MSL3, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-208ENST00000421368 C8orf37Q96NL8 207 aa25.06■■□□□ 1.6
MSL3-208ENST00000421368 NRKQ7Z2Y5 1582 aa25.05■■□□□ 1.6
MSL3-208ENST00000421368 PHRF1Q9P1Y6 1649 aaKnown RBP25.05■■□□□ 1.6
MSL3-208ENST00000421368 SLC24A1O60721 1099 aa25.05■■□□□ 1.6
MSL3-208ENST00000421368 PLEKHG5O94827 1062 aa25.05■■□□□ 1.6
MSL3-208ENST00000421368 PUS7Q96PZ0 661 aaKnown RBP25.05■■□□□ 1.6
MSL3-208ENST00000421368 AFF2P51816 1311 aa25.04■■□□□ 1.6
MSL3-208ENST00000421368 CPSF1Q10570 1443 aaKnown RBP25.03■■□□□ 1.6
MSL3-208ENST00000421368 CD163L1Q9NR16 1453 aa25.03■■□□□ 1.6
MSL3-208ENST00000421368 POTEAQ6S8J7 498 aa25.03■■□□□ 1.6
MSL3-208ENST00000421368 BRD4O60885 1362 aaPredicted RBP25.03■■□□□ 1.6
MSL3-208ENST00000421368 SSH2Q76I76 1423 aa25.03■■□□□ 1.6
MSL3-208ENST00000421368 PIK3C2AO00443 1686 aa25.01■■□□□ 1.59
MSL3-208ENST00000421368 TMF1P82094 1093 aa25.01■■□□□ 1.59
MSL3-208ENST00000421368 TMC1Q8TDI8 760 aa25■■□□□ 1.59
MSL3-208ENST00000421368 NGLY1Q96IV0 654 aa25■■□□□ 1.59
MSL3-208ENST00000421368 SLC12A5Q9H2X9 1139 aa25■■□□□ 1.59
MSL3-208ENST00000421368 PLCH1Q4KWH8 1693 aa25■■□□□ 1.59
MSL3-208ENST00000421368 HAP1P54257 671 aaPredicted RBP24.99■■□□□ 1.59
MSL3-208ENST00000421368 NUTM2GQ5VZR2 741 aa24.99■■□□□ 1.59
MSL3-208ENST00000421368 ZNF772Q68DY9 489 aaPredicted RBP24.99■■□□□ 1.59
MSL3-208ENST00000421368 ZNF692Q9BU19 519 aaPredicted RBP24.99■■□□□ 1.59
MSL3-208ENST00000421368 KTN1Q86UP2 1357 aaKnown RBP24.98■■□□□ 1.59
MSL3-208ENST00000421368 EIF4G2P78344 907 aaKnown RBP eCLIP24.98■■□□□ 1.59
MSL3-208ENST00000421368 HSPA5P11021 654 aaKnown RBP24.97■■□□□ 1.59
MSL3-208ENST00000421368 ABTB2Q8N961 1025 aa24.97■■□□□ 1.59
MSL3-208ENST00000421368 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.97■■□□□ 1.59
MSL3-208ENST00000421368 MYOM1P52179 1685 aa24.97■■□□□ 1.59
MSL3-208ENST00000421368 NWD2Q9ULI1 1742 aa24.96■■□□□ 1.59
MSL3-208ENST00000421368 FNBP4Q8N3X1 1017 aaPredicted RBP24.96■■□□□ 1.59
MSL3-208ENST00000421368 NINLQ9Y2I6 1382 aa24.95■■□□□ 1.59
MSL3-208ENST00000421368 TTC21BQ7Z4L5 1316 aa24.94■■□□□ 1.58
MSL3-208ENST00000421368 SLIT2O94813 1529 aa24.94■■□□□ 1.58
MSL3-208ENST00000421368 A0A1W2PP64 1363 aa24.93■■□□□ 1.58
MSL3-208ENST00000421368 COL14A1Q05707 1796 aaKnown RBP24.93■■□□□ 1.58
MSL3-208ENST00000421368 USP19O94966 1318 aa24.93■■□□□ 1.58
MSL3-208ENST00000421368 BCL9LQ86UU0 1499 aa24.93■■□□□ 1.58
MSL3-208ENST00000421368 CDCA8Q53HL2 280 aa24.92■■□□□ 1.58
MSL3-208ENST00000421368 HDGFL2Q7Z4V5 671 aaPredicted RBP24.92■■□□□ 1.58
MSL3-208ENST00000421368 USP21Q9UK80 565 aa24.92■■□□□ 1.58
MSL3-208ENST00000421368 TERF2IPQ9NYB0 399 aa24.91■■□□□ 1.58
MSL3-208ENST00000421368 USP54Q70EL1 1684 aa24.91■■□□□ 1.58
MSL3-208ENST00000421368 TTC21AQ8NDW8 1320 aa24.9■■□□□ 1.58
MSL3-208ENST00000421368 NRAPQ86VF7 1730 aa24.9■■□□□ 1.58
MSL3-208ENST00000421368 NLRP13Q86W25 1043 aa24.9■■□□□ 1.58
MSL3-208ENST00000421368 SLIT3O75094 1523 aa24.9■■□□□ 1.58
MSL3-208ENST00000421368 EDC4Q6P2E9 1401 aaKnown RBP24.89■■□□□ 1.58
MSL3-208ENST00000421368 FAM83GA6ND36 823 aa24.89■■□□□ 1.58
MSL3-208ENST00000421368 NLRP6P59044 892 aa24.89■■□□□ 1.58
MSL3-208ENST00000421368 QTRT2Q9H974 415 aaKnown RBP24.89■■□□□ 1.58
MSL3-208ENST00000421368 ATRNO75882 1429 aa24.87■■□□□ 1.57
MSL3-208ENST00000421368 ANKRD36BQ8N2N9 1353 aa24.86■■□□□ 1.57
MSL3-208ENST00000421368 KIAA0232Q92628 1395 aa24.86■■□□□ 1.57
MSL3-208ENST00000421368 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.86■■□□□ 1.57
MSL3-208ENST00000421368 ZC3H6P61129 1189 aaKnown RBP24.84■■□□□ 1.57
MSL3-208ENST00000421368 UNC5CLQ8IV45 518 aa24.84■■□□□ 1.57
MSL3-208ENST00000421368 PRDM11Q9NQV5 511 aa24.84■■□□□ 1.57
MSL3-208ENST00000421368 TRPC5Q9UL62 973 aaPredicted RBP24.84■■□□□ 1.57
MSL3-208ENST00000421368 GCP02774 474 aa24.83■■□□□ 1.57
MSL3-208ENST00000421368 RXRBP28702 533 aa24.83■■□□□ 1.57
MSL3-208ENST00000421368 NME9Q86XW9 330 aa24.83■■□□□ 1.57
MSL3-208ENST00000421368 CPDO75976 1380 aa24.82■■□□□ 1.56
MSL3-208ENST00000421368 LMO7Q8WWI1 1683 aa24.82■■□□□ 1.56
MSL3-208ENST00000421368 ZRANB1Q9UGI0 708 aa24.82■■□□□ 1.56
MSL3-208ENST00000421368 USP31Q70CQ4 1352 aa24.81■■□□□ 1.56
MSL3-208ENST00000421368 RBM6P78332 1123 aaKnown RBP24.81■■□□□ 1.56
MSL3-208ENST00000421368 KIF20BQ96Q89 1820 aa24.81■■□□□ 1.56
MSL3-208ENST00000421368 CHRNA2Q15822 529 aa24.8■■□□□ 1.56
MSL3-208ENST00000421368 BTG4Q9NY30 223 aa24.8■■□□□ 1.56
MSL3-208ENST00000421368 CDK12Q9NYV4 1490 aaPredicted RBP24.8■■□□□ 1.56
MSL3-208ENST00000421368 NFAT5O94916 1531 aa24.8■■□□□ 1.56
MSL3-208ENST00000421368 GLI3P10071 1580 aa24.8■■□□□ 1.56
MSL3-208ENST00000421368 C11orf95C9JLR9 678 aaPredicted RBP24.79■■□□□ 1.56
MSL3-208ENST00000421368 COL18A1P39060 1754 aa24.79■■□□□ 1.56
MSL3-208ENST00000421368 RGPD5Q99666 1765 aa24.78■■□□□ 1.56
MSL3-208ENST00000421368 POLR3GLQ9BT43 218 aa24.78■■□□□ 1.56
MSL3-208ENST00000421368 LTN1O94822 1766 aa24.77■■□□□ 1.56
MSL3-208ENST00000421368 OVOS2A0A0J9YW53 1432 aa24.77■■□□□ 1.56
MSL3-208ENST00000421368 OVOS2Q6IE36 1432 aa24.77■■□□□ 1.56
MSL3-208ENST00000421368 CAMTA1Q9Y6Y1 1673 aa24.76■■□□□ 1.55
MSL3-208ENST00000421368 RGS12O14924 1447 aa24.76■■□□□ 1.55
MSL3-208ENST00000421368 VPS72Q15906 364 aa24.75■■□□□ 1.55
MSL3-208ENST00000421368 GJD4Q96KN9 370 aaPredicted RBP24.75■■□□□ 1.55
MSL3-208ENST00000421368 KCNH5Q8NCM2 988 aa24.74■■□□□ 1.55
MSL3-208ENST00000421368 SOCS7O14512 581 aa24.73■■□□□ 1.55
MSL3-208ENST00000421368 SOX12O15370 315 aa24.73■■□□□ 1.55
MSL3-208ENST00000421368 CARD14Q9BXL6 1004 aa24.73■■□□□ 1.55
MSL3-208ENST00000421368 NSD3Q9BZ95 1437 aa24.72■■□□□ 1.55
MSL3-208ENST00000421368 ZBTB7CA1YPR0 619 aa24.71■■□□□ 1.55
MSL3-208ENST00000421368 BRWD3Q6RI45 1802 aa24.7■■□□□ 1.55
MSL3-208ENST00000421368 AATKQ6ZMQ8 1374 aa24.7■■□□□ 1.55
MSL3-208ENST00000421368 ARHGEF25Q86VW2 580 aa24.7■■□□□ 1.54
MSL3-208ENST00000421368 KIF7Q2M1P5 1343 aa24.69■■□□□ 1.54
MSL3-208ENST00000421368 CCDC9Q9Y3X0 531 aaKnown RBP24.69■■□□□ 1.54
MSL3-208ENST00000421368 FYB1O15117 783 aa24.68■■□□□ 1.54
MSL3-208ENST00000421368 COL5A2P05997 1499 aaPredicted RBP24.68■■□□□ 1.54
MSL3-208ENST00000421368 COG3Q96JB2 828 aa24.67■■□□□ 1.54
MSL3-208ENST00000421368 STRN4Q9NRL3 753 aa24.67■■□□□ 1.54
MSL3-208ENST00000421368 ABCC6O95255 1503 aa24.66■■□□□ 1.54
MSL3-208ENST00000421368 GGNBP2Q9H3C7 697 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms