RNA–Protein interactions for RNA: ENST00000420774.1

AC004540.1-205, humanhuman

TSL 2

Gene AC004540.1, Length 496 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-205ENST00000420774 CPSF1Q10570 1443 aaKnown RBP17.7■□□□□ 0.42
AC004540.1-205ENST00000420774 LRP6O75581 1613 aa17.69■□□□□ 0.42
AC004540.1-205ENST00000420774 SBNO1A3KN83 1393 aa17.69■□□□□ 0.42
AC004540.1-205ENST00000420774 PAK3O75914 559 aaPredicted RBP17.69■□□□□ 0.42
AC004540.1-205ENST00000420774 PLEKHG5O94827 1062 aa17.69■□□□□ 0.42
AC004540.1-205ENST00000420774 CRYBG1Q9Y4K1 1723 aa17.69■□□□□ 0.42
AC004540.1-205ENST00000420774 A0A1W2PP64 1363 aa17.68■□□□□ 0.42
AC004540.1-205ENST00000420774 PIK3C2AO00443 1686 aa17.68■□□□□ 0.42
AC004540.1-205ENST00000420774 MED1Q15648 1581 aaPredicted RBP17.68■□□□□ 0.42
AC004540.1-205ENST00000420774 LMOD2Q6P5Q4 547 aa17.68■□□□□ 0.42
AC004540.1-205ENST00000420774 CDCA8Q53HL2 280 aa17.67■□□□□ 0.42
AC004540.1-205ENST00000420774 KTN1Q86UP2 1357 aaKnown RBP17.66■□□□□ 0.42
AC004540.1-205ENST00000420774 SSH2Q76I76 1423 aa17.66■□□□□ 0.42
AC004540.1-205ENST00000420774 MARF1Q9Y4F3 1742 aaKnown RBP17.66■□□□□ 0.42
AC004540.1-205ENST00000420774 NINLQ9Y2I6 1382 aa17.66■□□□□ 0.42
AC004540.1-205ENST00000420774 NUTM2BA6NNL0 878 aaPredicted RBP17.65■□□□□ 0.42
AC004540.1-205ENST00000420774 NUTM2EB1AL46 878 aaPredicted RBP17.65■□□□□ 0.42
AC004540.1-205ENST00000420774 NUTM2GQ5VZR2 741 aa17.65■□□□□ 0.42
AC004540.1-205ENST00000420774 NUTM2AQ8IVF1 878 aaPredicted RBP17.65■□□□□ 0.42
AC004540.1-205ENST00000420774 KIF7Q2M1P5 1343 aa17.65■□□□□ 0.42
AC004540.1-205ENST00000420774 PHRF1Q9P1Y6 1649 aaKnown RBP17.65■□□□□ 0.42
AC004540.1-205ENST00000420774 CABLES1Q8TDN4 633 aa17.64■□□□□ 0.41
AC004540.1-205ENST00000420774 ARHGEF10O15013 1369 aa17.64■□□□□ 0.41
AC004540.1-205ENST00000420774 HDGFL2Q7Z4V5 671 aaPredicted RBP17.63■□□□□ 0.41
AC004540.1-205ENST00000420774 SPATA31A6Q5VVP1 1343 aa17.63■□□□□ 0.41
AC004540.1-205ENST00000420774 ANKRD36BQ8N2N9 1353 aa17.63■□□□□ 0.41
AC004540.1-205ENST00000420774 ZNF692Q9BU19 519 aaPredicted RBP17.62■□□□□ 0.41
AC004540.1-205ENST00000420774 TERF2IPQ9NYB0 399 aa17.62■□□□□ 0.41
AC004540.1-205ENST00000420774 TTC21BQ7Z4L5 1316 aa17.62■□□□□ 0.41
AC004540.1-205ENST00000420774 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.61■□□□□ 0.41
AC004540.1-205ENST00000420774 ABTB2Q8N961 1025 aa17.61■□□□□ 0.41
AC004540.1-205ENST00000420774 WASHC2AQ641Q2 1341 aa17.6■□□□□ 0.41
AC004540.1-205ENST00000420774 EDC4Q6P2E9 1401 aaKnown RBP17.6■□□□□ 0.41
AC004540.1-205ENST00000420774 KIF20BQ96Q89 1820 aa17.6■□□□□ 0.41
AC004540.1-205ENST00000420774 BRD4O60885 1362 aaPredicted RBP17.59■□□□□ 0.41
AC004540.1-205ENST00000420774 CCDC7Q96M83 1385 aa17.59■□□□□ 0.41
AC004540.1-205ENST00000420774 USP54Q70EL1 1684 aa17.58■□□□□ 0.41
AC004540.1-205ENST00000420774 ADAMTS2O95450 1211 aa17.58■□□□□ 0.4
AC004540.1-205ENST00000420774 ZRANB1Q9UGI0 708 aa17.58■□□□□ 0.4
AC004540.1-205ENST00000420774 NME9Q86XW9 330 aa17.57■□□□□ 0.4
AC004540.1-205ENST00000420774 CARD14Q9BXL6 1004 aa17.57■□□□□ 0.4
AC004540.1-205ENST00000420774 NSD3Q9BZ95 1437 aa17.56■□□□□ 0.4
AC004540.1-205ENST00000420774 TTC21AQ8NDW8 1320 aa17.56■□□□□ 0.4
AC004540.1-205ENST00000420774 MEX3CQ5U5Q3 659 aaKnown RBP17.56■□□□□ 0.4
AC004540.1-205ENST00000420774 HAP1P54257 671 aaPredicted RBP17.55■□□□□ 0.4
AC004540.1-205ENST00000420774 NLRP6P59044 892 aa17.55■□□□□ 0.4
AC004540.1-205ENST00000420774 SLIT3O75094 1523 aa17.55■□□□□ 0.4
AC004540.1-205ENST00000420774 PLCH1Q4KWH8 1693 aa17.55■□□□□ 0.4
AC004540.1-205ENST00000420774 USP19O94966 1318 aa17.54■□□□□ 0.4
AC004540.1-205ENST00000420774 C8orf37Q96NL8 207 aa17.54■□□□□ 0.4
AC004540.1-205ENST00000420774 PANK3Q9H999 370 aa17.54■□□□□ 0.4
AC004540.1-205ENST00000420774 NLRP13Q86W25 1043 aa17.53■□□□□ 0.4
AC004540.1-205ENST00000420774 OVOS2A0A0J9YW53 1432 aa17.52■□□□□ 0.4
AC004540.1-205ENST00000420774 OVOS2Q6IE36 1432 aa17.52■□□□□ 0.4
AC004540.1-205ENST00000420774 SOX12O15370 315 aa17.51■□□□□ 0.39
AC004540.1-205ENST00000420774 USP31Q70CQ4 1352 aa17.51■□□□□ 0.39
AC004540.1-205ENST00000420774 LTN1O94822 1766 aa17.51■□□□□ 0.39
AC004540.1-205ENST00000420774 ANKRD26Q9UPS8 1709 aa17.5■□□□□ 0.39
AC004540.1-205ENST00000420774 NFAT5O94916 1531 aa17.5■□□□□ 0.39
AC004540.1-205ENST00000420774 COL14A1Q05707 1796 aaKnown RBP17.49■□□□□ 0.39
AC004540.1-205ENST00000420774 FYB1O15117 783 aa17.49■□□□□ 0.39
AC004540.1-205ENST00000420774 ZC3H6P61129 1189 aaKnown RBP17.49■□□□□ 0.39
AC004540.1-205ENST00000420774 GGNBP2Q9H3C7 697 aa17.49■□□□□ 0.39
AC004540.1-205ENST00000420774 RGS17Q9UGC6 210 aaPredicted RBP17.49■□□□□ 0.39
AC004540.1-205ENST00000420774 KIAA0232Q92628 1395 aa17.49■□□□□ 0.39
AC004540.1-205ENST00000420774 GCP02774 474 aa17.48■□□□□ 0.39
AC004540.1-205ENST00000420774 NGLY1Q96IV0 654 aa17.48■□□□□ 0.39
AC004540.1-205ENST00000420774 RGPD5Q99666 1765 aa17.48■□□□□ 0.39
AC004540.1-205ENST00000420774 AFF2P51816 1311 aa17.47■□□□□ 0.39
AC004540.1-205ENST00000420774 NRAPQ86VF7 1730 aa17.47■□□□□ 0.39
AC004540.1-205ENST00000420774 NWD2Q9ULI1 1742 aa17.47■□□□□ 0.39
AC004540.1-205ENST00000420774 FAM83GA6ND36 823 aa17.47■□□□□ 0.39
AC004540.1-205ENST00000420774 CHRNA2Q15822 529 aa17.47■□□□□ 0.39
AC004540.1-205ENST00000420774 LMO7Q8WWI1 1683 aa17.46■□□□□ 0.39
AC004540.1-205ENST00000420774 SLIT2O94813 1529 aa17.46■□□□□ 0.39
AC004540.1-205ENST00000420774 COL18A1P39060 1754 aa17.45■□□□□ 0.38
AC004540.1-205ENST00000420774 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.45■□□□□ 0.38
AC004540.1-205ENST00000420774 ZBTB7CA1YPR0 619 aa17.45■□□□□ 0.38
AC004540.1-205ENST00000420774 FBLN1P23142 703 aa17.45■□□□□ 0.38
AC004540.1-205ENST00000420774 COG3Q96JB2 828 aa17.45■□□□□ 0.38
AC004540.1-205ENST00000420774 PRDM11Q9NQV5 511 aa17.45■□□□□ 0.38
AC004540.1-205ENST00000420774 CGNL1Q0VF96 1302 aa17.45■□□□□ 0.38
AC004540.1-205ENST00000420774 BCL9LQ86UU0 1499 aa17.44■□□□□ 0.38
AC004540.1-205ENST00000420774 CPDO75976 1380 aa17.43■□□□□ 0.38
AC004540.1-205ENST00000420774 PER1O15534 1290 aaPredicted RBP17.42■□□□□ 0.38
AC004540.1-205ENST00000420774 FNBP4Q8N3X1 1017 aaPredicted RBP17.42■□□□□ 0.38
AC004540.1-205ENST00000420774 KCNH5Q8NCM2 988 aa17.42■□□□□ 0.38
AC004540.1-205ENST00000420774 USP21Q9UK80 565 aa17.42■□□□□ 0.38
AC004540.1-205ENST00000420774 CAMTA1Q9Y6Y1 1673 aa17.42■□□□□ 0.38
AC004540.1-205ENST00000420774 BTG4Q9NY30 223 aa17.41■□□□□ 0.38
AC004540.1-205ENST00000420774 KNSTRNQ9Y448 316 aa17.41■□□□□ 0.38
AC004540.1-205ENST00000420774 MAP2P11137 1827 aaKnown RBP17.41■□□□□ 0.38
AC004540.1-205ENST00000420774 AMER1Q5JTC6 1135 aaPredicted RBP17.4■□□□□ 0.38
AC004540.1-205ENST00000420774 POTEAQ6S8J7 498 aa17.4■□□□□ 0.38
AC004540.1-205ENST00000420774 ARHGEF25Q86VW2 580 aa17.4■□□□□ 0.38
AC004540.1-205ENST00000420774 PEAK1Q9H792 1746 aa17.4■□□□□ 0.38
AC004540.1-205ENST00000420774 CNGB1Q14028 1251 aaPredicted RBP17.39■□□□□ 0.37
AC004540.1-205ENST00000420774 ZNF772Q68DY9 489 aaPredicted RBP17.38■□□□□ 0.37
AC004540.1-205ENST00000420774 TNNT2P45379 298 aaPredicted RBP17.37■□□□□ 0.37
AC004540.1-205ENST00000420774 DDX10Q13206 875 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms