RNA–Protein interactions for RNA: ENST00000420568.5

SLC13A3-206, Transcript of solute carrier family 13 member 3, humanhuman

TSL 5

Gene SLC13A3, Length 1,256 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-206ENST00000420568 ALS2Q96Q42 1657 aa23.22■■□□□ 1.31
SLC13A3-206ENST00000420568 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.22■■□□□ 1.31
SLC13A3-206ENST00000420568 BTG4Q9NY30 223 aa23.21■■□□□ 1.31
SLC13A3-206ENST00000420568 ROCK2O75116 1388 aaKnown RBP23.2■■□□□ 1.3
SLC13A3-206ENST00000420568 TRIM26Q12899 539 aaPredicted RBP23.2■■□□□ 1.3
SLC13A3-206ENST00000420568 GLI3P10071 1580 aa23.19■■□□□ 1.3
SLC13A3-206ENST00000420568 SEPT12Q8IYM1 358 aa23.18■■□□□ 1.3
SLC13A3-206ENST00000420568 CCDC9Q9Y3X0 531 aaKnown RBP23.18■■□□□ 1.3
SLC13A3-206ENST00000420568 ABCA3Q99758 1704 aa23.17■■□□□ 1.3
SLC13A3-206ENST00000420568 PPIP5K1Q6PFW1 1433 aa23.16■■□□□ 1.3
SLC13A3-206ENST00000420568 ITSN1Q15811 1721 aa23.16■■□□□ 1.3
SLC13A3-206ENST00000420568 NUTM2GQ5VZR2 741 aa23.16■■□□□ 1.3
SLC13A3-206ENST00000420568 CCDC125Q86Z20 511 aa23.16■■□□□ 1.3
SLC13A3-206ENST00000420568 PRDM11Q9NQV5 511 aa23.16■■□□□ 1.3
SLC13A3-206ENST00000420568 CABP1Q9NZU7 370 aa23.16■■□□□ 1.3
SLC13A3-206ENST00000420568 EVC2Q86UK5 1308 aa23.15■■□□□ 1.3
SLC13A3-206ENST00000420568 ABTB2Q8N961 1025 aa23.15■■□□□ 1.3
SLC13A3-206ENST00000420568 NWD2Q9ULI1 1742 aa23.14■■□□□ 1.3
SLC13A3-206ENST00000420568 TOPAZ1Q8N9V7 1692 aa23.14■■□□□ 1.29
SLC13A3-206ENST00000420568 TRPM1Q7Z4N2 1603 aa23.14■■□□□ 1.29
SLC13A3-206ENST00000420568 BRD4O60885 1362 aaPredicted RBP23.13■■□□□ 1.29
SLC13A3-206ENST00000420568 KIAA0232Q92628 1395 aa23.13■■□□□ 1.29
SLC13A3-206ENST00000420568 PLCH1Q4KWH8 1693 aa23.12■■□□□ 1.29
SLC13A3-206ENST00000420568 ZC3H6P61129 1189 aaKnown RBP23.11■■□□□ 1.29
SLC13A3-206ENST00000420568 SPATA31A5Q5VU36 1347 aa23.1■■□□□ 1.29
SLC13A3-206ENST00000420568 SPATA31A7Q8IWB4 1347 aa23.1■■□□□ 1.29
SLC13A3-206ENST00000420568 COL14A1Q05707 1796 aaKnown RBP23.1■■□□□ 1.29
SLC13A3-206ENST00000420568 CHRNA2Q15822 529 aa23.1■■□□□ 1.29
SLC13A3-206ENST00000420568 NLRP13Q86W25 1043 aa23.1■■□□□ 1.29
SLC13A3-206ENST00000420568 USP19O94966 1318 aa23.09■■□□□ 1.29
SLC13A3-206ENST00000420568 FAM98CQ17RN3 349 aaKnown RBP23.09■■□□□ 1.29
SLC13A3-206ENST00000420568 CRYBG1Q9Y4K1 1723 aa23.08■■□□□ 1.29
SLC13A3-206ENST00000420568 KRT27Q7Z3Y8 459 aa23.08■■□□□ 1.29
SLC13A3-206ENST00000420568 CARD11Q9BXL7 1154 aa23.08■■□□□ 1.29
SLC13A3-206ENST00000420568 TONSLQ96HA7 1378 aa23.08■■□□□ 1.29
SLC13A3-206ENST00000420568 QRICH2Q9H0J4 1663 aa23.08■■□□□ 1.29
SLC13A3-206ENST00000420568 GCP02774 474 aa23.07■■□□□ 1.28
SLC13A3-206ENST00000420568 ZNF692Q9BU19 519 aaPredicted RBP23.06■■□□□ 1.28
SLC13A3-206ENST00000420568 USP6P35125 1406 aa23.06■■□□□ 1.28
SLC13A3-206ENST00000420568 NRAPQ86VF7 1730 aa23.05■■□□□ 1.28
SLC13A3-206ENST00000420568 CPDO75976 1380 aa23.05■■□□□ 1.28
SLC13A3-206ENST00000420568 SSH2Q76I76 1423 aa23.05■■□□□ 1.28
SLC13A3-206ENST00000420568 EP400Q96L91 3159 aa23.04■■□□□ 1.28
SLC13A3-206ENST00000420568 SPATA31A1Q5TZJ5 1347 aa23.04■■□□□ 1.28
SLC13A3-206ENST00000420568 SBNO2Q9Y2G9 1366 aa23.03■■□□□ 1.28
SLC13A3-206ENST00000420568 BLMP54132 1417 aaPredicted RBP23.03■■□□□ 1.28
SLC13A3-206ENST00000420568 A0A0G2JS52 829 aa23.03■■□□□ 1.28
SLC13A3-206ENST00000420568 NLRP6P59044 892 aa23.03■■□□□ 1.28
SLC13A3-206ENST00000420568 MYT1Q01538 1121 aa23.03■■□□□ 1.28
SLC13A3-206ENST00000420568 STRN4Q9NRL3 753 aa23.03■■□□□ 1.28
SLC13A3-206ENST00000420568 EVA1CP58658 441 aa23.01■■□□□ 1.27
SLC13A3-206ENST00000420568 PHRF1Q9P1Y6 1649 aaKnown RBP23■■□□□ 1.27
SLC13A3-206ENST00000420568 TTC21BQ7Z4L5 1316 aa22.99■■□□□ 1.27
SLC13A3-206ENST00000420568 CPSF1Q10570 1443 aaKnown RBP22.98■■□□□ 1.27
SLC13A3-206ENST00000420568 NRKQ7Z2Y5 1582 aa22.97■■□□□ 1.27
SLC13A3-206ENST00000420568 SF3B2Q13435 895 aaKnown RBP22.97■■□□□ 1.27
SLC13A3-206ENST00000420568 LARP1Q6PKG0 1096 aaKnown RBP22.97■■□□□ 1.27
SLC13A3-206ENST00000420568 CAMTA1Q9Y6Y1 1673 aa22.97■■□□□ 1.27
SLC13A3-206ENST00000420568 BARGINQ6ZT62 677 aa22.96■■□□□ 1.27
SLC13A3-206ENST00000420568 BRWD3Q6RI45 1802 aa22.96■■□□□ 1.27
SLC13A3-206ENST00000420568 DEFB132Q7Z7B7 95 aa22.95■■□□□ 1.26
SLC13A3-206ENST00000420568 TTC21AQ8NDW8 1320 aa22.95■■□□□ 1.26
SLC13A3-206ENST00000420568 ZRANB1Q9UGI0 708 aa22.95■■□□□ 1.26
SLC13A3-206ENST00000420568 PUS7Q96PZ0 661 aaKnown RBP22.94■■□□□ 1.26
SLC13A3-206ENST00000420568 USP35Q9P2H5 1018 aa22.94■■□□□ 1.26
SLC13A3-206ENST00000420568 AATKQ6ZMQ8 1374 aa22.93■■□□□ 1.26
SLC13A3-206ENST00000420568 KTN1Q86UP2 1357 aaKnown RBP22.92■■□□□ 1.26
SLC13A3-206ENST00000420568 FAM182BQ5T319 152 aa22.92■■□□□ 1.26
SLC13A3-206ENST00000420568 TCP11L2Q8N4U5 519 aa22.92■■□□□ 1.26
SLC13A3-206ENST00000420568 THRAP3Q9Y2W1 955 aaKnown RBP22.92■■□□□ 1.26
SLC13A3-206ENST00000420568 SLIT3O75094 1523 aa22.92■■□□□ 1.26
SLC13A3-206ENST00000420568 KCNH5Q8NCM2 988 aa22.91■■□□□ 1.26
SLC13A3-206ENST00000420568 LMO7Q8WWI1 1683 aa22.9■■□□□ 1.26
SLC13A3-206ENST00000420568 THSD7AQ9UPZ6 1657 aa22.9■■□□□ 1.26
SLC13A3-206ENST00000420568 ARHGEF25Q86VW2 580 aa22.9■■□□□ 1.26
SLC13A3-206ENST00000420568 TESK2Q96S53 571 aa22.9■■□□□ 1.26
SLC13A3-206ENST00000420568 SLC12A5Q9H2X9 1139 aa22.9■■□□□ 1.26
SLC13A3-206ENST00000420568 ST20-MTHFSA0A0A6YYL1 179 aa22.89■■□□□ 1.25
SLC13A3-206ENST00000420568 ZBTB7CA1YPR0 619 aa22.89■■□□□ 1.25
SLC13A3-206ENST00000420568 TMC1Q8TDI8 760 aa22.89■■□□□ 1.25
SLC13A3-206ENST00000420568 COL5A2P05997 1499 aaPredicted RBP22.88■■□□□ 1.25
SLC13A3-206ENST00000420568 AXIN2Q9Y2T1 843 aa22.88■■□□□ 1.25
SLC13A3-206ENST00000420568 SLC24A1O60721 1099 aa22.87■■□□□ 1.25
SLC13A3-206ENST00000420568 BAG6P46379 1132 aa22.87■■□□□ 1.25
SLC13A3-206ENST00000420568 FAM196AQ6ZSG2 479 aa22.87■■□□□ 1.25
SLC13A3-206ENST00000420568 PIK3C2AO00443 1686 aa22.87■■□□□ 1.25
SLC13A3-206ENST00000420568 CD163L1Q9NR16 1453 aa22.86■■□□□ 1.25
SLC13A3-206ENST00000420568 HDGFL2Q7Z4V5 671 aaPredicted RBP22.86■■□□□ 1.25
SLC13A3-206ENST00000420568 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.86■■□□□ 1.25
SLC13A3-206ENST00000420568 PDE3BQ13370 1112 aa22.85■■□□□ 1.25
SLC13A3-206ENST00000420568 USP31Q70CQ4 1352 aa22.85■■□□□ 1.25
SLC13A3-206ENST00000420568 CRB1P82279 1406 aa22.84■■□□□ 1.25
SLC13A3-206ENST00000420568 TERF2IPQ9NYB0 399 aa22.84■■□□□ 1.25
SLC13A3-206ENST00000420568 SOX12O15370 315 aa22.83■■□□□ 1.25
SLC13A3-206ENST00000420568 AKAP12Q02952 1782 aa22.82■■□□□ 1.24
SLC13A3-206ENST00000420568 TOM1L2Q6ZVM7 507 aa22.82■■□□□ 1.24
SLC13A3-206ENST00000420568 NME9Q86XW9 330 aa22.82■■□□□ 1.24
SLC13A3-206ENST00000420568 TIMELESSQ9UNS1 1208 aa22.82■■□□□ 1.24
SLC13A3-206ENST00000420568 EN1Q05925 392 aaPredicted RBP22.81■■□□□ 1.24
SLC13A3-206ENST00000420568 WDR17Q8IZU2 1322 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms