RNA–Protein interactions for RNA: ENST00000419225.1

AC008060.3-201, humanhuman

TSL 4 BASIC

Gene AC008060.3, Length 534 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008060.3-201ENST00000419225 RBM6P78332 1123 aaKnown RBP13.42□□□□□ -0.26
AC008060.3-201ENST00000419225 XPCQ01831 940 aaPredicted RBP13.42□□□□□ -0.26
AC008060.3-201ENST00000419225 NEUROD1Q13562 356 aa13.42□□□□□ -0.26
AC008060.3-201ENST00000419225 NUDT16Q96DE0 195 aaKnown RBP13.42□□□□□ -0.26
AC008060.3-201ENST00000419225 PLEKHG3A1L390 1219 aa13.41□□□□□ -0.26
AC008060.3-201ENST00000419225 ADAMTS2O95450 1211 aa13.41□□□□□ -0.26
AC008060.3-201ENST00000419225 HOXD11P31277 338 aaPredicted RBP13.41□□□□□ -0.26
AC008060.3-201ENST00000419225 CDK19Q9BWU1 502 aa13.41□□□□□ -0.26
AC008060.3-201ENST00000419225 TRPC5Q9UL62 973 aaPredicted RBP13.41□□□□□ -0.26
AC008060.3-201ENST00000419225 BCL9LQ86UU0 1499 aa13.41□□□□□ -0.26
AC008060.3-201ENST00000419225 MON2Q7Z3U7 1717 aa13.4□□□□□ -0.26
AC008060.3-201ENST00000419225 NGDNQ8NEJ9 315 aaKnown RBP13.4□□□□□ -0.26
AC008060.3-201ENST00000419225 PMFBP1Q8TBY8 1022 aa13.4□□□□□ -0.26
AC008060.3-201ENST00000419225 USP21Q9UK80 565 aa13.4□□□□□ -0.26
AC008060.3-201ENST00000419225 RGS12O14924 1447 aa13.39□□□□□ -0.27
AC008060.3-201ENST00000419225 PPIP5K1Q6PFW1 1433 aa13.39□□□□□ -0.27
AC008060.3-201ENST00000419225 EVC2Q86UK5 1308 aa13.39□□□□□ -0.27
AC008060.3-201ENST00000419225 USP54Q70EL1 1684 aa13.38□□□□□ -0.27
AC008060.3-201ENST00000419225 NRKQ7Z2Y5 1582 aa13.38□□□□□ -0.27
AC008060.3-201ENST00000419225 QTRT2Q9H974 415 aaKnown RBP13.38□□□□□ -0.27
AC008060.3-201ENST00000419225 GLI3P10071 1580 aa13.37□□□□□ -0.27
AC008060.3-201ENST00000419225 ATAD2Q6PL18 1390 aa13.37□□□□□ -0.27
AC008060.3-201ENST00000419225 HAP1P54257 671 aaPredicted RBP13.37□□□□□ -0.27
AC008060.3-201ENST00000419225 ACEP12821 1306 aa13.37□□□□□ -0.27
AC008060.3-201ENST00000419225 SLC24A1O60721 1099 aa13.36□□□□□ -0.27
AC008060.3-201ENST00000419225 SRPK2P78362 688 aaKnown RBP13.36□□□□□ -0.27
AC008060.3-201ENST00000419225 NBPF8Q3BBV2 869 aa13.36□□□□□ -0.27
AC008060.3-201ENST00000419225 TIMELESSQ9UNS1 1208 aa13.36□□□□□ -0.27
AC008060.3-201ENST00000419225 UNC5CLQ8IV45 518 aa13.35□□□□□ -0.27
AC008060.3-201ENST00000419225 USP6P35125 1406 aa13.35□□□□□ -0.27
AC008060.3-201ENST00000419225 BRWD3Q6RI45 1802 aa13.34□□□□□ -0.27
AC008060.3-201ENST00000419225 PIK3C2AO00443 1686 aa13.34□□□□□ -0.27
AC008060.3-201ENST00000419225 LMO7Q8WWI1 1683 aa13.34□□□□□ -0.27
AC008060.3-201ENST00000419225 LMOD2Q6P5Q4 547 aa13.33□□□□□ -0.28
AC008060.3-201ENST00000419225 PUS7Q96PZ0 661 aaKnown RBP13.33□□□□□ -0.28
AC008060.3-201ENST00000419225 CARD11Q9BXL7 1154 aa13.33□□□□□ -0.28
AC008060.3-201ENST00000419225 SLIT3O75094 1523 aa13.33□□□□□ -0.28
AC008060.3-201ENST00000419225 SSH2Q76I76 1423 aa13.32□□□□□ -0.28
AC008060.3-201ENST00000419225 USP19O94966 1318 aa13.32□□□□□ -0.28
AC008060.3-201ENST00000419225 ABCC6O95255 1503 aa13.31□□□□□ -0.28
AC008060.3-201ENST00000419225 PAK3O75914 559 aaPredicted RBP13.31□□□□□ -0.28
AC008060.3-201ENST00000419225 VPS72Q15906 364 aa13.31□□□□□ -0.28
AC008060.3-201ENST00000419225 GJD4Q96KN9 370 aaPredicted RBP13.31□□□□□ -0.28
AC008060.3-201ENST00000419225 ZNF692Q9BU19 519 aaPredicted RBP13.31□□□□□ -0.28
AC008060.3-201ENST00000419225 CABP2Q9NPB3 220 aa13.31□□□□□ -0.28
AC008060.3-201ENST00000419225 CPDO75976 1380 aa13.31□□□□□ -0.28
AC008060.3-201ENST00000419225 NINLQ9Y2I6 1382 aa13.31□□□□□ -0.28
AC008060.3-201ENST00000419225 CPSF1Q10570 1443 aaKnown RBP13.3□□□□□ -0.28
AC008060.3-201ENST00000419225 CABLES1Q8TDN4 633 aa13.3□□□□□ -0.28
AC008060.3-201ENST00000419225 THSD7AQ9UPZ6 1657 aa13.3□□□□□ -0.28
AC008060.3-201ENST00000419225 NLRP13Q86W25 1043 aa13.28□□□□□ -0.28
AC008060.3-201ENST00000419225 TTC21AQ8NDW8 1320 aa13.28□□□□□ -0.28
AC008060.3-201ENST00000419225 WNK3Q9BYP7 1800 aa13.27□□□□□ -0.28
AC008060.3-201ENST00000419225 ABTB2Q8N961 1025 aa13.27□□□□□ -0.29
AC008060.3-201ENST00000419225 UPF1Q92900 1129 aaKnown RBP eCLIP13.27□□□□□ -0.29
AC008060.3-201ENST00000419225 CABP1Q9NZU7 370 aa13.27□□□□□ -0.29
AC008060.3-201ENST00000419225 EP400Q96L91 3159 aa13.27□□□□□ -0.29
AC008060.3-201ENST00000419225 COL18A1P39060 1754 aa13.27□□□□□ -0.29
AC008060.3-201ENST00000419225 FAM83GA6ND36 823 aa13.26□□□□□ -0.29
AC008060.3-201ENST00000419225 ONECUT3O60422 494 aaPredicted RBP13.26□□□□□ -0.29
AC008060.3-201ENST00000419225 KIAA0232Q92628 1395 aa13.26□□□□□ -0.29
AC008060.3-201ENST00000419225 PRDM11Q9NQV5 511 aa13.26□□□□□ -0.29
AC008060.3-201ENST00000419225 LTN1O94822 1766 aa13.25□□□□□ -0.29
AC008060.3-201ENST00000419225 RGPD1P0DJD0 1748 aa13.25□□□□□ -0.29
AC008060.3-201ENST00000419225 PARP4Q9UKK3 1724 aaKnown RBP13.25□□□□□ -0.29
AC008060.3-201ENST00000419225 CD163L1Q9NR16 1453 aa13.24□□□□□ -0.29
AC008060.3-201ENST00000419225 EDC4Q6P2E9 1401 aaKnown RBP13.24□□□□□ -0.29
AC008060.3-201ENST00000419225 KTN1Q86UP2 1357 aaKnown RBP13.24□□□□□ -0.29
AC008060.3-201ENST00000419225 CCDC125Q86Z20 511 aa13.24□□□□□ -0.29
AC008060.3-201ENST00000419225 BTG4Q9NY30 223 aa13.24□□□□□ -0.29
AC008060.3-201ENST00000419225 USP47Q96K76 1375 aa13.23□□□□□ -0.29
AC008060.3-201ENST00000419225 RGPD5Q99666 1765 aa13.23□□□□□ -0.29
AC008060.3-201ENST00000419225 FAM208AQ9UK61 1670 aaKnown RBP13.23□□□□□ -0.29
AC008060.3-201ENST00000419225 CAMTA1Q9Y6Y1 1673 aa13.23□□□□□ -0.29
AC008060.3-201ENST00000419225 NFAT5O94916 1531 aa13.23□□□□□ -0.29
AC008060.3-201ENST00000419225 AATKQ6ZMQ8 1374 aa13.22□□□□□ -0.29
AC008060.3-201ENST00000419225 SPATA31A5Q5VU36 1347 aa13.22□□□□□ -0.29
AC008060.3-201ENST00000419225 TTC21BQ7Z4L5 1316 aa13.22□□□□□ -0.29
AC008060.3-201ENST00000419225 SPATA31A7Q8IWB4 1347 aa13.22□□□□□ -0.29
AC008060.3-201ENST00000419225 TESK2Q96S53 571 aa13.22□□□□□ -0.29
AC008060.3-201ENST00000419225 MYOM1P52179 1685 aa13.21□□□□□ -0.29
AC008060.3-201ENST00000419225 USP31Q70CQ4 1352 aa13.21□□□□□ -0.29
AC008060.3-201ENST00000419225 KIF20BQ96Q89 1820 aa13.21□□□□□ -0.29
AC008060.3-201ENST00000419225 GCP02774 474 aa13.21□□□□□ -0.29
AC008060.3-201ENST00000419225 KCNH5Q8NCM2 988 aa13.21□□□□□ -0.29
AC008060.3-201ENST00000419225 TERF2IPQ9NYB0 399 aa13.21□□□□□ -0.29
AC008060.3-201ENST00000419225 COL5A2P05997 1499 aaPredicted RBP13.21□□□□□ -0.3
AC008060.3-201ENST00000419225 NLRP6P59044 892 aa13.2□□□□□ -0.3
AC008060.3-201ENST00000419225 HDGFL2Q7Z4V5 671 aaPredicted RBP13.2□□□□□ -0.3
AC008060.3-201ENST00000419225 PCGF6Q9BYE7 350 aa13.2□□□□□ -0.3
AC008060.3-201ENST00000419225 CCDC9Q9Y3X0 531 aaKnown RBP13.2□□□□□ -0.3
AC008060.3-201ENST00000419225 SPATA31A1Q5TZJ5 1347 aa13.19□□□□□ -0.3
AC008060.3-201ENST00000419225 ST20-MTHFSA0A0A6YYL1 179 aa13.19□□□□□ -0.3
AC008060.3-201ENST00000419225 CDCA8Q53HL2 280 aa13.19□□□□□ -0.3
AC008060.3-201ENST00000419225 BLMP54132 1417 aaPredicted RBP13.19□□□□□ -0.3
AC008060.3-201ENST00000419225 TNS1Q9HBL0 1735 aaKnown RBP13.19□□□□□ -0.3
AC008060.3-201ENST00000419225 A0A1W2PP64 1363 aa13.19□□□□□ -0.3
AC008060.3-201ENST00000419225 PLEKHG5O94827 1062 aa13.18□□□□□ -0.3
AC008060.3-201ENST00000419225 ZC3H6P61129 1189 aaKnown RBP13.18□□□□□ -0.3
AC008060.3-201ENST00000419225 NUTM2GQ5VZR2 741 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms