RNA–Protein interactions for RNA: ENST00000419113.5

NDUFA3-206, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-206ENST00000419113 SSH2Q76I76 1423 aa22.56■■□□□ 1.2
NDUFA3-206ENST00000419113 DDX17Q92841 729 aaKnown RBP22.54■■□□□ 1.2
NDUFA3-206ENST00000419113 LRRC59Q96AG4 307 aaKnown RBP22.54■■□□□ 1.2
NDUFA3-206ENST00000419113 TNS3Q68CZ2 1445 aa22.54■■□□□ 1.2
NDUFA3-206ENST00000419113 NSD3Q9BZ95 1437 aa22.54■■□□□ 1.2
NDUFA3-206ENST00000419113 TTC21BQ7Z4L5 1316 aa22.54■■□□□ 1.2
NDUFA3-206ENST00000419113 ALS2Q96Q42 1657 aa22.53■■□□□ 1.2
NDUFA3-206ENST00000419113 KIF20BQ96Q89 1820 aa22.53■■□□□ 1.2
NDUFA3-206ENST00000419113 ARHGEF10O15013 1369 aa22.52■■□□□ 1.2
NDUFA3-206ENST00000419113 PAK3O75914 559 aaPredicted RBP22.52■■□□□ 1.2
NDUFA3-206ENST00000419113 XPCQ01831 940 aaPredicted RBP22.52■■□□□ 1.2
NDUFA3-206ENST00000419113 KNSTRNQ9Y448 316 aa22.52■■□□□ 1.2
NDUFA3-206ENST00000419113 SPATA31A3Q5VYP0 1347 aa22.52■■□□□ 1.2
NDUFA3-206ENST00000419113 DDX10Q13206 875 aaKnown RBP22.51■■□□□ 1.19
NDUFA3-206ENST00000419113 CARD14Q9BXL6 1004 aa22.51■■□□□ 1.19
NDUFA3-206ENST00000419113 CGNL1Q0VF96 1302 aa22.51■■□□□ 1.19
NDUFA3-206ENST00000419113 NSD2O96028 1365 aa22.49■■□□□ 1.19
NDUFA3-206ENST00000419113 PIK3C2AO00443 1686 aa22.49■■□□□ 1.19
NDUFA3-206ENST00000419113 USP54Q70EL1 1684 aa22.49■■□□□ 1.19
NDUFA3-206ENST00000419113 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.48■■□□□ 1.19
NDUFA3-206ENST00000419113 ABTB2Q8N961 1025 aa22.48■■□□□ 1.19
NDUFA3-206ENST00000419113 SHPRHQ149N8 1683 aa22.47■■□□□ 1.19
NDUFA3-206ENST00000419113 PER1O15534 1290 aaPredicted RBP22.47■■□□□ 1.19
NDUFA3-206ENST00000419113 ANKRD26Q9UPS8 1709 aa22.47■■□□□ 1.19
NDUFA3-206ENST00000419113 LMOD2Q6P5Q4 547 aa22.46■■□□□ 1.19
NDUFA3-206ENST00000419113 NLRP13Q86W25 1043 aa22.46■■□□□ 1.19
NDUFA3-206ENST00000419113 USP31Q70CQ4 1352 aa22.46■■□□□ 1.19
NDUFA3-206ENST00000419113 COL22A1Q8NFW1 1626 aaPredicted RBP22.46■■□□□ 1.19
NDUFA3-206ENST00000419113 HSPA1LP34931 641 aa22.45■■□□□ 1.18
NDUFA3-206ENST00000419113 JCADQ9P266 1359 aa22.45■■□□□ 1.18
NDUFA3-206ENST00000419113 NPC1L1Q9UHC9 1359 aa22.45■■□□□ 1.18
NDUFA3-206ENST00000419113 MED1Q15648 1581 aaPredicted RBP22.45■■□□□ 1.18
NDUFA3-206ENST00000419113 FYB1O15117 783 aa22.43■■□□□ 1.18
NDUFA3-206ENST00000419113 PNPLA6Q8IY17 1366 aa22.42■■□□□ 1.18
NDUFA3-206ENST00000419113 NLRP6P59044 892 aa22.42■■□□□ 1.18
NDUFA3-206ENST00000419113 NME9Q86XW9 330 aa22.42■■□□□ 1.18
NDUFA3-206ENST00000419113 COG3Q96JB2 828 aa22.42■■□□□ 1.18
NDUFA3-206ENST00000419113 AMER1Q5JTC6 1135 aaPredicted RBP22.41■■□□□ 1.18
NDUFA3-206ENST00000419113 OVOS2A0A0J9YW53 1432 aa22.4■■□□□ 1.18
NDUFA3-206ENST00000419113 OVOS2Q6IE36 1432 aa22.4■■□□□ 1.18
NDUFA3-206ENST00000419113 MARF1Q9Y4F3 1742 aaKnown RBP22.4■■□□□ 1.18
NDUFA3-206ENST00000419113 CRYBG1Q9Y4K1 1723 aa22.4■■□□□ 1.18
NDUFA3-206ENST00000419113 PHRF1Q9P1Y6 1649 aaKnown RBP22.39■■□□□ 1.17
NDUFA3-206ENST00000419113 USP19O94966 1318 aa22.38■■□□□ 1.17
NDUFA3-206ENST00000419113 ABCA3Q99758 1704 aa22.38■■□□□ 1.17
NDUFA3-206ENST00000419113 GGNBP2Q9H3C7 697 aa22.38■■□□□ 1.17
NDUFA3-206ENST00000419113 SLIT3O75094 1523 aa22.37■■□□□ 1.17
NDUFA3-206ENST00000419113 KCNH5Q8NCM2 988 aa22.37■■□□□ 1.17
NDUFA3-206ENST00000419113 SPATA31A6Q5VVP1 1343 aa22.36■■□□□ 1.17
NDUFA3-206ENST00000419113 NUTM2GQ5VZR2 741 aa22.36■■□□□ 1.17
NDUFA3-206ENST00000419113 HAP1P54257 671 aaPredicted RBP22.34■■□□□ 1.17
NDUFA3-206ENST00000419113 CC2D1BQ5T0F9 858 aaKnown RBP22.33■■□□□ 1.17
NDUFA3-206ENST00000419113 MORC1Q86VD1 984 aa22.33■■□□□ 1.17
NDUFA3-206ENST00000419113 ZRANB1Q9UGI0 708 aa22.33■■□□□ 1.17
NDUFA3-206ENST00000419113 GCP02774 474 aa22.31■■□□□ 1.16
NDUFA3-206ENST00000419113 AATKQ6ZMQ8 1374 aa22.29■■□□□ 1.16
NDUFA3-206ENST00000419113 RALBP1Q15311 655 aa22.29■■□□□ 1.16
NDUFA3-206ENST00000419113 NFAT5O94916 1531 aa22.29■■□□□ 1.16
NDUFA3-206ENST00000419113 CABLES1Q8TDN4 633 aa22.28■■□□□ 1.16
NDUFA3-206ENST00000419113 LTN1O94822 1766 aa22.27■■□□□ 1.16
NDUFA3-206ENST00000419113 PARD3Q8TEW0 1356 aa22.27■■□□□ 1.16
NDUFA3-206ENST00000419113 MAP2P11137 1827 aaKnown RBP22.27■■□□□ 1.16
NDUFA3-206ENST00000419113 CPDO75976 1380 aa22.26■■□□□ 1.15
NDUFA3-206ENST00000419113 PLEKHG5O94827 1062 aa22.26■■□□□ 1.15
NDUFA3-206ENST00000419113 ANP32CO43423 234 aa22.25■■□□□ 1.15
NDUFA3-206ENST00000419113 ABCC6O95255 1503 aa22.25■■□□□ 1.15
NDUFA3-206ENST00000419113 KIF24Q5T7B8 1368 aa22.25■■□□□ 1.15
NDUFA3-206ENST00000419113 CNGB1Q14028 1251 aaPredicted RBP22.24■■□□□ 1.15
NDUFA3-206ENST00000419113 NUTM2BA6NNL0 878 aaPredicted RBP22.23■■□□□ 1.15
NDUFA3-206ENST00000419113 NUTM2EB1AL46 878 aaPredicted RBP22.23■■□□□ 1.15
NDUFA3-206ENST00000419113 SOX12O15370 315 aa22.23■■□□□ 1.15
NDUFA3-206ENST00000419113 NUTM2AQ8IVF1 878 aaPredicted RBP22.23■■□□□ 1.15
NDUFA3-206ENST00000419113 COL14A1Q05707 1796 aaKnown RBP22.22■■□□□ 1.15
NDUFA3-206ENST00000419113 DIEXFQ68CQ4 756 aaKnown RBP22.22■■□□□ 1.15
NDUFA3-206ENST00000419113 ILDR1Q86SU0 546 aaPredicted RBP22.22■■□□□ 1.15
NDUFA3-206ENST00000419113 ARHGEF25Q86VW2 580 aa22.22■■□□□ 1.15
NDUFA3-206ENST00000419113 PRKRIP1Q9H875 184 aaPredicted RBP22.22■■□□□ 1.15
NDUFA3-206ENST00000419113 TNNT2P45379 298 aaPredicted RBP22.21■■□□□ 1.15
NDUFA3-206ENST00000419113 ZC3H6P61129 1189 aaKnown RBP22.21■■□□□ 1.15
NDUFA3-206ENST00000419113 PRDM11Q9NQV5 511 aa22.21■■□□□ 1.15
NDUFA3-206ENST00000419113 RTL1A6NKG5 1358 aa22.21■■□□□ 1.15
NDUFA3-206ENST00000419113 KIAA0232Q92628 1395 aa22.21■■□□□ 1.15
NDUFA3-206ENST00000419113 SMG6Q86US8 1419 aaKnown RBP22.2■■□□□ 1.14
NDUFA3-206ENST00000419113 LRP6O75581 1613 aa22.2■■□□□ 1.14
NDUFA3-206ENST00000419113 MAP3K19Q56UN5 1328 aa22.19■■□□□ 1.14
NDUFA3-206ENST00000419113 MYBBP1AQ9BQG0 1328 aaKnown RBP22.18■■□□□ 1.14
NDUFA3-206ENST00000419113 ADAMTS2O95450 1211 aa22.18■■□□□ 1.14
NDUFA3-206ENST00000419113 AMPHP49418 695 aa22.18■■□□□ 1.14
NDUFA3-206ENST00000419113 MEX3CQ5U5Q3 659 aaKnown RBP22.18■■□□□ 1.14
NDUFA3-206ENST00000419113 NWD2Q9ULI1 1742 aa22.17■■□□□ 1.14
NDUFA3-206ENST00000419113 FLT4P35916 1363 aa22.17■■□□□ 1.14
NDUFA3-206ENST00000419113 RRS1Q15050 365 aaKnown RBP22.17■■□□□ 1.14
NDUFA3-206ENST00000419113 POLKQ9UBT6 870 aa22.17■■□□□ 1.14
NDUFA3-206ENST00000419113 COL18A1P39060 1754 aa22.17■■□□□ 1.14
NDUFA3-206ENST00000419113 CDK12Q9NYV4 1490 aaPredicted RBP22.16■■□□□ 1.14
NDUFA3-206ENST00000419113 BLMP54132 1417 aaPredicted RBP22.16■■□□□ 1.14
NDUFA3-206ENST00000419113 PPP2R1AP30153 589 aa22.16■■□□□ 1.14
NDUFA3-206ENST00000419113 PLCH1Q4KWH8 1693 aa22.16■■□□□ 1.14
NDUFA3-206ENST00000419113 LMO7Q8WWI1 1683 aa22.16■■□□□ 1.14
NDUFA3-206ENST00000419113 ZBTB7CA1YPR0 619 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms