RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 ZBTB24O43167 697 aaPredicted RBP5.32□□□□□ -1.56
VPS41-206ENST00000418457 PTCRAQ6ISU1 281 aaPredicted RBP5.32□□□□□ -1.56
VPS41-206ENST00000418457 WWC1Q8IX03 1113 aa5.32□□□□□ -1.56
VPS41-206ENST00000418457 UNC93B1Q9H1C4 597 aa5.32□□□□□ -1.56
VPS41-206ENST00000418457 FKBPLQ9UIM3 349 aa5.32□□□□□ -1.56
VPS41-206ENST00000418457 ZC3H4Q9UPT8 1303 aaKnown RBP5.31□□□□□ -1.56
VPS41-206ENST00000418457 A0A0G2JS52 829 aa5.31□□□□□ -1.56
VPS41-206ENST00000418457 NBPF14Q5TI25 921 aa5.31□□□□□ -1.56
VPS41-206ENST00000418457 PROSER2Q86WR7 435 aaPredicted RBP5.31□□□□□ -1.56
VPS41-206ENST00000418457 PLA2G2CQ5R387 149 aa5.3□□□□□ -1.56
VPS41-206ENST00000418457 GPKOWQ92917 476 aaPredicted RBP eCLIP5.3□□□□□ -1.565e-7■■■■■ 43.5
VPS41-206ENST00000418457 GPR37L1O60883 481 aa5.29□□□□□ -1.56
VPS41-206ENST00000418457 RPIAP49247 311 aa5.29□□□□□ -1.56
VPS41-206ENST00000418457 TRIM32Q13049 653 aa5.29□□□□□ -1.56
VPS41-206ENST00000418457 IRF5Q13568 498 aa5.29□□□□□ -1.56
VPS41-206ENST00000418457 LINC01559Q495D7 138 aa5.29□□□□□ -1.56
VPS41-206ENST00000418457 PDXDC2PQ6P474 469 aa5.29□□□□□ -1.56
VPS41-206ENST00000418457 WASHC4Q2M389 1173 aa5.28□□□□□ -1.56
VPS41-206ENST00000418457 FNBP4Q8N3X1 1017 aaPredicted RBP5.28□□□□□ -1.56
VPS41-206ENST00000418457 BAP1Q92560 729 aa5.28□□□□□ -1.56
VPS41-206ENST00000418457 ZNF330Q9Y3S2 320 aaPredicted RBP5.28□□□□□ -1.56
VPS41-206ENST00000418457 ZBBXA8MT70 800 aa5.27□□□□□ -1.57
VPS41-206ENST00000418457 TRAK2O60296 914 aa5.27□□□□□ -1.57
VPS41-206ENST00000418457 CD2BP2O95400 341 aaKnown RBP5.27□□□□□ -1.57
VPS41-206ENST00000418457 PTK2Q05397 1052 aa5.27□□□□□ -1.57
VPS41-206ENST00000418457 AGERQ15109 404 aa5.27□□□□□ -1.57
VPS41-206ENST00000418457 LIAT1Q6ZQX7 453 aa5.27□□□□□ -1.57
VPS41-206ENST00000418457 ZNF511Q8NB15 262 aa5.27□□□□□ -1.57
VPS41-206ENST00000418457 GPSM3Q9Y4H4 160 aa5.27□□□□□ -1.57
VPS41-206ENST00000418457 SLC19A1P41440 591 aa5.26□□□□□ -1.57
VPS41-206ENST00000418457 SH3BP2P78314 561 aa5.26□□□□□ -1.57
VPS41-206ENST00000418457 VAC14Q08AM6 782 aa5.26□□□□□ -1.57
VPS41-206ENST00000418457 NR1H3Q13133 447 aa5.26□□□□□ -1.57
VPS41-206ENST00000418457 BPHLQ86WA6 291 aaPredicted RBP5.26□□□□□ -1.57
VPS41-206ENST00000418457 ARHGAP9Q9BRR9 750 aa5.26□□□□□ -1.57
VPS41-206ENST00000418457 FBXO45P0C2W1 286 aa5.25□□□□□ -1.57
VPS41-206ENST00000418457 WNT7BP56706 349 aa5.25□□□□□ -1.57
VPS41-206ENST00000418457 SH3BP5LQ7L8J4 393 aa5.25□□□□□ -1.57
VPS41-206ENST00000418457 ZBTB33Q86T24 672 aa5.25□□□□□ -1.57
VPS41-206ENST00000418457 FOXJ1Q92949 421 aa5.25□□□□□ -1.57
VPS41-206ENST00000418457 EMID1Q96A84 441 aaPredicted RBP5.25□□□□□ -1.57
VPS41-206ENST00000418457 MAGEB6P1A0A0J9YX57 407 aa5.24□□□□□ -1.57
VPS41-206ENST00000418457 SUPT5HO00267 1087 aaKnown RBP5.24□□□□□ -1.57
VPS41-206ENST00000418457 EIF4G2P78344 907 aaKnown RBP eCLIP5.24□□□□□ -1.57
VPS41-206ENST00000418457 SPRYD7Q5W111 196 aa5.24□□□□□ -1.57
VPS41-206ENST00000418457 SH3RF1Q7Z6J0 888 aa5.24□□□□□ -1.57
VPS41-206ENST00000418457 CARD14Q9BXL6 1004 aa5.24□□□□□ -1.57
VPS41-206ENST00000418457 PRKD2Q9BZL6 878 aa5.24□□□□□ -1.57
VPS41-206ENST00000418457 ZNF777Q9ULD5 760 aaPredicted RBP5.24□□□□□ -1.57
VPS41-206ENST00000418457 POM121CA8CG34 1229 aa5.23□□□□□ -1.57
VPS41-206ENST00000418457 SOX11P35716 441 aa5.23□□□□□ -1.57
VPS41-206ENST00000418457 SKOR1P84550 965 aa5.23□□□□□ -1.57
VPS41-206ENST00000418457 ADAM32Q8TC27 787 aa5.23□□□□□ -1.57
VPS41-206ENST00000418457 OCSTAMPQ9BR26 566 aa5.23□□□□□ -1.57
VPS41-206ENST00000418457 V9GY48 417 aaPredicted RBP5.23□□□□□ -1.57
VPS41-206ENST00000418457 VARSP26640 1264 aaKnown RBP5.22□□□□□ -1.57
VPS41-206ENST00000418457 ERFEQ4G0M1 354 aa5.22□□□□□ -1.57
VPS41-206ENST00000418457 C4orf48Q5BLP8 95 aa5.22□□□□□ -1.57
VPS41-206ENST00000418457 RC3H1Q5TC82 1133 aaKnown RBP5.22□□□□□ -1.57
VPS41-206ENST00000418457 ZNF697Q5TEC3 545 aa5.22□□□□□ -1.57
VPS41-206ENST00000418457 ZNF598Q86UK7 904 aaKnown RBP5.22□□□□□ -1.57
VPS41-206ENST00000418457 EHBP1Q8NDI1 1231 aa5.22□□□□□ -1.57
VPS41-206ENST00000418457 ZNF592Q92610 1267 aa5.22□□□□□ -1.57
VPS41-206ENST00000418457 PCDHB9Q9Y5E1 797 aa5.22□□□□□ -1.57
VPS41-206ENST00000418457 ARID3CA6NKF2 412 aa5.21□□□□□ -1.58
VPS41-206ENST00000418457 MCCD1P59942 119 aaPredicted RBP5.21□□□□□ -1.58
VPS41-206ENST00000418457 SEMA3FQ13275 785 aa5.21□□□□□ -1.58
VPS41-206ENST00000418457 HDGFL1Q5TGJ6 251 aa5.21□□□□□ -1.58
VPS41-206ENST00000418457 DZIP3Q86Y13 1208 aaKnown RBP5.21□□□□□ -1.58
VPS41-206ENST00000418457 FAM174AQ8TBP5 190 aa5.21□□□□□ -1.58
VPS41-206ENST00000418457 GLMNQ92990 594 aa5.21□□□□□ -1.58
VPS41-206ENST00000418457 SLC10A4Q96EP9 437 aa5.21□□□□□ -1.58
VPS41-206ENST00000418457 CALR3Q96L12 384 aaKnown RBP5.21□□□□□ -1.58
VPS41-206ENST00000418457 C1QTNF2Q9BXJ5 285 aa5.21□□□□□ -1.58
VPS41-206ENST00000418457 WNT7AO00755 349 aa5.2□□□□□ -1.58
VPS41-206ENST00000418457 RGS20O76081 388 aa5.2□□□□□ -1.58
VPS41-206ENST00000418457 TRMT44Q8IYL2 757 aaKnown RBP5.2□□□□□ -1.58
VPS41-206ENST00000418457 ALG2Q9H553 416 aa5.2□□□□□ -1.58
VPS41-206ENST00000418457 FOXC1Q12948 553 aa5.19□□□□□ -1.58
VPS41-206ENST00000418457 ADAMTS19Q8TE59 1207 aa5.19□□□□□ -1.58
VPS41-206ENST00000418457 MRGPRX2Q96LB1 330 aa5.19□□□□□ -1.58
VPS41-206ENST00000418457 CDV3Q9UKY7 258 aaKnown RBP5.19□□□□□ -1.58
VPS41-206ENST00000418457 NBPF20Q3BBV1 942 aa5.18□□□□□ -1.58
VPS41-206ENST00000418457 CCDC97Q96F63 343 aaPredicted RBP5.18□□□□□ -1.58
VPS41-206ENST00000418457 C1orf115Q9H7X2 142 aa5.18□□□□□ -1.58
VPS41-206ENST00000418457 MAP4K5Q9Y4K4 846 aa5.18□□□□□ -1.58
VPS41-206ENST00000418457 SIAH2O43255 324 aa5.17□□□□□ -1.58
VPS41-206ENST00000418457 ARID5BQ14865 1188 aa5.17□□□□□ -1.58
VPS41-206ENST00000418457 VASH1Q7L8A9 365 aaPredicted RBP5.17□□□□□ -1.58
VPS41-206ENST00000418457 MPNDQ8N594 471 aa5.17□□□□□ -1.58
VPS41-206ENST00000418457 PKD2L1Q9P0L9 805 aa5.17□□□□□ -1.58
VPS41-206ENST00000418457 CEP126Q9P2H0 1117 aa5.17□□□□□ -1.58
VPS41-206ENST00000418457 TLL2Q9Y6L7 1015 aa5.17□□□□□ -1.58
VPS41-206ENST00000418457 TNFRSF10AO00220 468 aa5.16□□□□□ -1.58
VPS41-206ENST00000418457 GDF9O60383 454 aa5.16□□□□□ -1.58
VPS41-206ENST00000418457 SLFNL1Q499Z3 407 aa5.16□□□□□ -1.58
VPS41-206ENST00000418457 CCDC82Q8N4S0 544 aa5.16□□□□□ -1.58
VPS41-206ENST00000418457 CDK15Q96Q40 435 aa5.16□□□□□ -1.58
VPS41-206ENST00000418457 KCTD15Q96SI1 283 aaPredicted RBP5.16□□□□□ -1.58
VPS41-206ENST00000418457 SERPINA10Q9UK55 444 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms