RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 JCADQ9P266 1359 aa14.96□□□□□ -0.02
RFC1-203ENST00000418436 PRR36Q9H6K5 1346 aa14.95□□□□□ -0.02
RFC1-203ENST00000418436 ITSN1Q15811 1721 aa14.95□□□□□ -0.02
RFC1-203ENST00000418436 NPHP3Q7Z494 1330 aa14.94□□□□□ -0.02
RFC1-203ENST00000418436 MNX1P50219 401 aaPredicted RBP14.94□□□□□ -0.02
RFC1-203ENST00000418436 LRRC59Q96AG4 307 aaKnown RBP14.94□□□□□ -0.02
RFC1-203ENST00000418436 CDK19Q9BWU1 502 aa14.94□□□□□ -0.02
RFC1-203ENST00000418436 PHF8Q9UPP1 1060 aa14.94□□□□□ -0.02
RFC1-203ENST00000418436 ATP7BP35670 1465 aa14.94□□□□□ -0.02
RFC1-203ENST00000418436 PXDNQ92626 1479 aa14.94□□□□□ -0.02
RFC1-203ENST00000418436 MED1Q15648 1581 aaPredicted RBP14.94□□□□□ -0.02
RFC1-203ENST00000418436 TOPAZ1Q8N9V7 1692 aa14.93□□□□□ -0.02
RFC1-203ENST00000418436 FOXO3O43524 673 aa14.93□□□□□ -0.02
RFC1-203ENST00000418436 CD44P16070 742 aaKnown RBP14.93□□□□□ -0.02
RFC1-203ENST00000418436 NUDT16Q96DE0 195 aaKnown RBP14.92□□□□□ -0.02
RFC1-203ENST00000418436 SBNO2Q9Y2G9 1366 aa14.92□□□□□ -0.02
RFC1-203ENST00000418436 SPATA31A6Q5VVP1 1343 aa14.9□□□□□ -0.02
RFC1-203ENST00000418436 PNPLA6Q8IY17 1366 aa14.89□□□□□ -0.03
RFC1-203ENST00000418436 COL22A1Q8NFW1 1626 aaPredicted RBP14.89□□□□□ -0.03
RFC1-203ENST00000418436 PMFBP1Q8TBY8 1022 aa14.89□□□□□ -0.03
RFC1-203ENST00000418436 CCDC61Q9Y6R9 512 aa14.89□□□□□ -0.03
RFC1-203ENST00000418436 EVC2Q86UK5 1308 aa14.89□□□□□ -0.03
RFC1-203ENST00000418436 KRT28Q7Z3Y7 464 aa14.88□□□□□ -0.03
RFC1-203ENST00000418436 TRPM3Q9HCF6 1732 aaPredicted RBP14.88□□□□□ -0.03
RFC1-203ENST00000418436 PLEKHG3A1L390 1219 aa14.87□□□□□ -0.03
RFC1-203ENST00000418436 SRPK2P78362 688 aaKnown RBP14.87□□□□□ -0.03
RFC1-203ENST00000418436 XPCQ01831 940 aaPredicted RBP14.87□□□□□ -0.03
RFC1-203ENST00000418436 CABP2Q9NPB3 220 aa14.87□□□□□ -0.03
RFC1-203ENST00000418436 LRP6O75581 1613 aa14.86□□□□□ -0.03
RFC1-203ENST00000418436 PSME1Q06323 249 aa14.86□□□□□ -0.03
RFC1-203ENST00000418436 SPATA31A3Q5VYP0 1347 aa14.86□□□□□ -0.03
RFC1-203ENST00000418436 SBNO1A3KN83 1393 aa14.85□□□□□ -0.03
RFC1-203ENST00000418436 POLR3AO14802 1390 aaPredicted RBP14.85□□□□□ -0.03
RFC1-203ENST00000418436 ST20-MTHFSA0A0A6YYL1 179 aa14.85□□□□□ -0.03
RFC1-203ENST00000418436 TESK2Q96S53 571 aa14.85□□□□□ -0.03
RFC1-203ENST00000418436 USP47Q96K76 1375 aa14.85□□□□□ -0.03
RFC1-203ENST00000418436 DISP3Q9P2K9 1392 aa14.85□□□□□ -0.03
RFC1-203ENST00000418436 PPIP5K1Q6PFW1 1433 aa14.84□□□□□ -0.03
RFC1-203ENST00000418436 NGDNQ8NEJ9 315 aaKnown RBP14.84□□□□□ -0.03
RFC1-203ENST00000418436 ALS2Q96Q42 1657 aa14.84□□□□□ -0.03
RFC1-203ENST00000418436 TNS3Q68CZ2 1445 aa14.83□□□□□ -0.03
RFC1-203ENST00000418436 MIER1Q8N108 512 aa14.83□□□□□ -0.04
RFC1-203ENST00000418436 ACEP12821 1306 aa14.83□□□□□ -0.04
RFC1-203ENST00000418436 SLC24A1O60721 1099 aa14.82□□□□□ -0.04
RFC1-203ENST00000418436 PLEKHG5O94827 1062 aa14.82□□□□□ -0.04
RFC1-203ENST00000418436 PUS7Q96PZ0 661 aaKnown RBP14.82□□□□□ -0.04
RFC1-203ENST00000418436 CABP1Q9NZU7 370 aa14.81□□□□□ -0.04
RFC1-203ENST00000418436 FBXO3Q9UK99 471 aa14.81□□□□□ -0.04
RFC1-203ENST00000418436 ATAD2Q6PL18 1390 aa14.81□□□□□ -0.04
RFC1-203ENST00000418436 AKAP12Q02952 1782 aa14.8□□□□□ -0.04
RFC1-203ENST00000418436 MARF1Q9Y4F3 1742 aaKnown RBP14.8□□□□□ -0.04
RFC1-203ENST00000418436 NUTM2BA6NNL0 878 aaPredicted RBP14.79□□□□□ -0.04
RFC1-203ENST00000418436 NUTM2EB1AL46 878 aaPredicted RBP14.79□□□□□ -0.04
RFC1-203ENST00000418436 ARHGEF10O15013 1369 aa14.79□□□□□ -0.04
RFC1-203ENST00000418436 NUTM2AQ8IVF1 878 aaPredicted RBP14.79□□□□□ -0.04
RFC1-203ENST00000418436 ABCA3Q99758 1704 aa14.79□□□□□ -0.04
RFC1-203ENST00000418436 RGS17Q9UGC6 210 aaPredicted RBP14.79□□□□□ -0.04
RFC1-203ENST00000418436 BRD4O60885 1362 aaPredicted RBP14.78□□□□□ -0.04
RFC1-203ENST00000418436 CRYBG1Q9Y4K1 1723 aa14.78□□□□□ -0.04
RFC1-203ENST00000418436 PLCD3Q8N3E9 789 aa14.77□□□□□ -0.05
RFC1-203ENST00000418436 USP6P35125 1406 aa14.76□□□□□ -0.05
RFC1-203ENST00000418436 CPSF1Q10570 1443 aaKnown RBP14.76□□□□□ -0.05
RFC1-203ENST00000418436 SSH2Q76I76 1423 aa14.76□□□□□ -0.05
RFC1-203ENST00000418436 MEX3CQ5U5Q3 659 aaKnown RBP14.76□□□□□ -0.05
RFC1-203ENST00000418436 ZRANB1Q9UGI0 708 aa14.76□□□□□ -0.05
RFC1-203ENST00000418436 MON2Q7Z3U7 1717 aa14.75□□□□□ -0.05
RFC1-203ENST00000418436 GABBR2O75899 941 aa14.75□□□□□ -0.05
RFC1-203ENST00000418436 TMF1P82094 1093 aa14.75□□□□□ -0.05
RFC1-203ENST00000418436 ZNF579Q8NAF0 562 aaKnown RBP14.75□□□□□ -0.05
RFC1-203ENST00000418436 CD163L1Q9NR16 1453 aa14.75□□□□□ -0.05
RFC1-203ENST00000418436 NRKQ7Z2Y5 1582 aa14.74□□□□□ -0.05
RFC1-203ENST00000418436 PAK3O75914 559 aaPredicted RBP14.74□□□□□ -0.05
RFC1-203ENST00000418436 ADAMTS2O95450 1211 aa14.74□□□□□ -0.05
RFC1-203ENST00000418436 EIF4G2P78344 907 aaKnown RBP eCLIP14.74□□□□□ -0.05
RFC1-203ENST00000418436 LMOD2Q6P5Q4 547 aa14.74□□□□□ -0.05
RFC1-203ENST00000418436 CABLES1Q8TDN4 633 aa14.73□□□□□ -0.05
RFC1-203ENST00000418436 NINLQ9Y2I6 1382 aa14.73□□□□□ -0.05
RFC1-203ENST00000418436 SLC12A5Q9H2X9 1139 aa14.72□□□□□ -0.05
RFC1-203ENST00000418436 PHRF1Q9P1Y6 1649 aaKnown RBP14.72□□□□□ -0.05
RFC1-203ENST00000418436 HSPA5P11021 654 aaKnown RBP14.71□□□□□ -0.05
RFC1-203ENST00000418436 FNBP4Q8N3X1 1017 aaPredicted RBP14.71□□□□□ -0.05
RFC1-203ENST00000418436 C8orf37Q96NL8 207 aa14.71□□□□□ -0.05
RFC1-203ENST00000418436 KTN1Q86UP2 1357 aaKnown RBP14.71□□□□□ -0.06
RFC1-203ENST00000418436 PIK3C2AO00443 1686 aa14.71□□□□□ -0.06
RFC1-203ENST00000418436 AFF2P51816 1311 aa14.7□□□□□ -0.06
RFC1-203ENST00000418436 CLCN6P51797 869 aa14.7□□□□□ -0.06
RFC1-203ENST00000418436 CDCA8Q53HL2 280 aa14.7□□□□□ -0.06
RFC1-203ENST00000418436 ZNF772Q68DY9 489 aaPredicted RBP14.7□□□□□ -0.06
RFC1-203ENST00000418436 POTEAQ6S8J7 498 aa14.7□□□□□ -0.06
RFC1-203ENST00000418436 ILDR2Q71H61 639 aa14.7□□□□□ -0.06
RFC1-203ENST00000418436 ABTB2Q8N961 1025 aa14.7□□□□□ -0.06
RFC1-203ENST00000418436 TMC1Q8TDI8 760 aa14.7□□□□□ -0.06
RFC1-203ENST00000418436 NGLY1Q96IV0 654 aa14.7□□□□□ -0.06
RFC1-203ENST00000418436 TTC21BQ7Z4L5 1316 aa14.69□□□□□ -0.06
RFC1-203ENST00000418436 USP19O94966 1318 aa14.68□□□□□ -0.06
RFC1-203ENST00000418436 TTC21AQ8NDW8 1320 aa14.68□□□□□ -0.06
RFC1-203ENST00000418436 MYOM1P52179 1685 aa14.68□□□□□ -0.06
RFC1-203ENST00000418436 HAP1P54257 671 aaPredicted RBP14.68□□□□□ -0.06
RFC1-203ENST00000418436 HDGFL2Q7Z4V5 671 aaPredicted RBP14.68□□□□□ -0.06
RFC1-203ENST00000418436 TERF2IPQ9NYB0 399 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms