RNA–Protein interactions for RNA: ENST00000417709.5

TTC38-202, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 3

Gene TTC38, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-202ENST00000417709 WASLO00401 505 aaPredicted RBP20.96■□□□□ 0.95
TTC38-202ENST00000417709 PRDM11Q9NQV5 511 aa20.96■□□□□ 0.95
TTC38-202ENST00000417709 EZH2Q15910 746 aaKnown RBP20.95■□□□□ 0.94
TTC38-202ENST00000417709 LRP5O75197 1615 aa20.94■□□□□ 0.94
TTC38-202ENST00000417709 CHRNA2Q15822 529 aa20.94■□□□□ 0.94
TTC38-202ENST00000417709 COL14A1Q05707 1796 aaKnown RBP20.93■□□□□ 0.94
TTC38-202ENST00000417709 TRIM37O94972 964 aa20.93■□□□□ 0.94
TTC38-202ENST00000417709 DCAF11Q8TEB1 546 aa20.93■□□□□ 0.94
TTC38-202ENST00000417709 STRN4Q9NRL3 753 aa20.93■□□□□ 0.94
TTC38-202ENST00000417709 NRAPQ86VF7 1730 aa20.92■□□□□ 0.94
TTC38-202ENST00000417709 ZC3H6P61129 1189 aaKnown RBP20.92■□□□□ 0.94
TTC38-202ENST00000417709 NUTM2GQ5VZR2 741 aa20.92■□□□□ 0.94
TTC38-202ENST00000417709 TRPM3Q9HCF6 1732 aaPredicted RBP20.92■□□□□ 0.94
TTC38-202ENST00000417709 DLC1Q96QB1 1528 aa20.91■□□□□ 0.94
TTC38-202ENST00000417709 USP35Q9P2H5 1018 aa20.91■□□□□ 0.94
TTC38-202ENST00000417709 APBA3O96018 575 aa20.9■□□□□ 0.94
TTC38-202ENST00000417709 ALS2Q96Q42 1657 aa20.89■□□□□ 0.94
TTC38-202ENST00000417709 SPATA31A1Q5TZJ5 1347 aa20.89■□□□□ 0.93
TTC38-202ENST00000417709 EVA1CP58658 441 aa20.89■□□□□ 0.93
TTC38-202ENST00000417709 FAM196AQ6ZSG2 479 aa20.89■□□□□ 0.93
TTC38-202ENST00000417709 NUDT16Q96DE0 195 aaKnown RBP20.89■□□□□ 0.93
TTC38-202ENST00000417709 CAMKK2Q96RR4 588 aa20.89■□□□□ 0.93
TTC38-202ENST00000417709 RGPD1P0DJD0 1748 aa20.89■□□□□ 0.93
TTC38-202ENST00000417709 KIAA0232Q92628 1395 aa20.88■□□□□ 0.93
TTC38-202ENST00000417709 EIF3AQ14152 1382 aaKnown RBP20.87■□□□□ 0.93
TTC38-202ENST00000417709 ADGRB1O14514 1584 aa20.85■□□□□ 0.93
TTC38-202ENST00000417709 PDE3BQ13370 1112 aa20.85■□□□□ 0.93
TTC38-202ENST00000417709 ADGRB2O60241 1585 aa20.85■□□□□ 0.93
TTC38-202ENST00000417709 CDK19Q9BWU1 502 aa20.84■□□□□ 0.93
TTC38-202ENST00000417709 TULP4Q9NRJ4 1543 aa20.83■□□□□ 0.93
TTC38-202ENST00000417709 NBPF8Q3BBV2 869 aa20.82■□□□□ 0.92
TTC38-202ENST00000417709 THSD7AQ9UPZ6 1657 aa20.81■□□□□ 0.92
TTC38-202ENST00000417709 DISP2A7MBM2 1401 aa20.8■□□□□ 0.92
TTC38-202ENST00000417709 LARP1Q6PKG0 1096 aaKnown RBP20.8■□□□□ 0.92
TTC38-202ENST00000417709 ABTB2Q8N961 1025 aa20.8■□□□□ 0.92
TTC38-202ENST00000417709 TNS1Q9HBL0 1735 aaKnown RBP20.8■□□□□ 0.92
TTC38-202ENST00000417709 ACEP12821 1306 aa20.79■□□□□ 0.92
TTC38-202ENST00000417709 NBPF14Q5TI25 921 aa20.79■□□□□ 0.92
TTC38-202ENST00000417709 RAB3GAP2Q9H2M9 1393 aa20.79■□□□□ 0.92
TTC38-202ENST00000417709 CRYBG1Q9Y4K1 1723 aa20.78■□□□□ 0.92
TTC38-202ENST00000417709 BARGINQ6ZT62 677 aa20.77■□□□□ 0.92
TTC38-202ENST00000417709 STAC3Q96MF2 364 aa20.77■□□□□ 0.92
TTC38-202ENST00000417709 TCP11L2Q8N4U5 519 aa20.76■□□□□ 0.91
TTC38-202ENST00000417709 CCDC61Q9Y6R9 512 aa20.76■□□□□ 0.91
TTC38-202ENST00000417709 PLEKHG3A1L390 1219 aa20.73■□□□□ 0.91
TTC38-202ENST00000417709 ZBTB7CA1YPR0 619 aa20.73■□□□□ 0.91
TTC38-202ENST00000417709 YY1P25490 414 aa20.73■□□□□ 0.91
TTC38-202ENST00000417709 ATP7BP35670 1465 aa20.73■□□□□ 0.91
TTC38-202ENST00000417709 ITSN1Q15811 1721 aa20.73■□□□□ 0.91
TTC38-202ENST00000417709 PARD3Q8TEW0 1356 aa20.72■□□□□ 0.91
TTC38-202ENST00000417709 SSH2Q76I76 1423 aa20.72■□□□□ 0.91
TTC38-202ENST00000417709 PPP1R1BQ9UD71 204 aaPredicted RBP20.72■□□□□ 0.91
TTC38-202ENST00000417709 CAMTA1Q9Y6Y1 1673 aa20.72■□□□□ 0.91
TTC38-202ENST00000417709 GCP02774 474 aa20.71■□□□□ 0.91
TTC38-202ENST00000417709 PHRF1Q9P1Y6 1649 aaKnown RBP20.71■□□□□ 0.91
TTC38-202ENST00000417709 NLRP13Q86W25 1043 aa20.7■□□□□ 0.9
TTC38-202ENST00000417709 SPON1Q9HCB6 807 aa20.7■□□□□ 0.9
TTC38-202ENST00000417709 POLR3AO14802 1390 aaPredicted RBP20.7■□□□□ 0.9
TTC38-202ENST00000417709 ARHGEF28Q8N1W1 1705 aaKnown RBP20.69■□□□□ 0.9
TTC38-202ENST00000417709 KCNQ2O43526 872 aa20.68■□□□□ 0.9
TTC38-202ENST00000417709 SRPK2P78362 688 aaKnown RBP20.68■□□□□ 0.9
TTC38-202ENST00000417709 THRAP3Q9Y2W1 955 aaKnown RBP20.68■□□□□ 0.9
TTC38-202ENST00000417709 DCAF8L1A6NGE4 600 aa20.67■□□□□ 0.9
TTC38-202ENST00000417709 NBPF1Q3BBV0 1214 aa20.67■□□□□ 0.9
TTC38-202ENST00000417709 CABP2Q9NPB3 220 aa20.66■□□□□ 0.9
TTC38-202ENST00000417709 CPDO75976 1380 aa20.65■□□□□ 0.9
TTC38-202ENST00000417709 NLRP6P59044 892 aa20.64■□□□□ 0.89
TTC38-202ENST00000417709 NUP188Q5SRE5 1749 aa20.64■□□□□ 0.89
TTC38-202ENST00000417709 USP19O94966 1318 aa20.63■□□□□ 0.89
TTC38-202ENST00000417709 RREB1Q92766 1687 aa20.63■□□□□ 0.89
TTC38-202ENST00000417709 PTF1AQ7RTS3 328 aa20.62■□□□□ 0.89
TTC38-202ENST00000417709 CABP1Q9NZU7 370 aa20.62■□□□□ 0.89
TTC38-202ENST00000417709 C11orf95C9JLR9 678 aaPredicted RBP20.61■□□□□ 0.89
TTC38-202ENST00000417709 DDB1Q16531 1140 aa20.61■□□□□ 0.89
TTC38-202ENST00000417709 TOM1L2Q6ZVM7 507 aa20.61■□□□□ 0.89
TTC38-202ENST00000417709 PPIP5K1Q6PFW1 1433 aa20.61■□□□□ 0.89
TTC38-202ENST00000417709 NRKQ7Z2Y5 1582 aa20.6■□□□□ 0.89
TTC38-202ENST00000417709 LMO7Q8WWI1 1683 aa20.59■□□□□ 0.89
TTC38-202ENST00000417709 PLSCR1O15162 318 aa20.59■□□□□ 0.89
TTC38-202ENST00000417709 TOPAZ1Q8N9V7 1692 aa20.58■□□□□ 0.89
TTC38-202ENST00000417709 COL5A2P05997 1499 aaPredicted RBP20.58■□□□□ 0.89
TTC38-202ENST00000417709 BCL11BQ9C0K0 894 aaPredicted RBP20.58■□□□□ 0.89
TTC38-202ENST00000417709 PDGFDQ9GZP0 370 aaPredicted RBP20.58■□□□□ 0.89
TTC38-202ENST00000417709 CRB1P82279 1406 aa20.58■□□□□ 0.88
TTC38-202ENST00000417709 CENPJQ9HC77 1338 aaPredicted RBP20.57■□□□□ 0.88
TTC38-202ENST00000417709 AXIN2Q9Y2T1 843 aa20.57■□□□□ 0.88
TTC38-202ENST00000417709 UTRNP46939 3433 aa20.56■□□□□ 0.88
TTC38-202ENST00000417709 PROM2Q8N271 834 aa20.56■□□□□ 0.88
TTC38-202ENST00000417709 MARCH10Q8NA82 808 aaPredicted RBP20.56■□□□□ 0.88
TTC38-202ENST00000417709 ANO8Q9HCE9 1232 aaPredicted RBP20.56■□□□□ 0.88
TTC38-202ENST00000417709 ZBTB7AO95365 584 aa20.55■□□□□ 0.88
TTC38-202ENST00000417709 PARP4Q9UKK3 1724 aaKnown RBP20.55■□□□□ 0.88
TTC38-202ENST00000417709 SBF2Q86WG5 1849 aa20.55■□□□□ 0.88
TTC38-202ENST00000417709 OVOS2A0A0G2JMS6 1433 aa20.54■□□□□ 0.88
TTC38-202ENST00000417709 OVOS2A0A0J9YW53 1432 aa20.54■□□□□ 0.88
TTC38-202ENST00000417709 OVOS2Q6IE36 1432 aa20.54■□□□□ 0.88
TTC38-202ENST00000417709 SOX12O15370 315 aa20.54■□□□□ 0.88
TTC38-202ENST00000417709 ATF5Q9Y2D1 282 aaPredicted RBP20.54■□□□□ 0.88
TTC38-202ENST00000417709 AATKQ6ZMQ8 1374 aa20.54■□□□□ 0.88
TTC38-202ENST00000417709 NINLQ9Y2I6 1382 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms