RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 NUDT16Q96DE0 195 aaKnown RBP14.69□□□□□ -0.06
HDLBP-206ENST00000417540 LMO7Q8WWI1 1683 aa14.68□□□□□ -0.06
HDLBP-206ENST00000417540 CD163L1Q9NR16 1453 aa14.68□□□□□ -0.06
HDLBP-206ENST00000417540 USP54Q70EL1 1684 aa14.68□□□□□ -0.06
HDLBP-206ENST00000417540 ARHGEF10O15013 1369 aa14.67□□□□□ -0.06
HDLBP-206ENST00000417540 WNK3Q9BYP7 1800 aa14.66□□□□□ -0.06
HDLBP-206ENST00000417540 LMOD2Q6P5Q4 547 aa14.66□□□□□ -0.06
HDLBP-206ENST00000417540 SLIT3O75094 1523 aa14.66□□□□□ -0.06
HDLBP-206ENST00000417540 USP6P35125 1406 aa14.66□□□□□ -0.06
HDLBP-206ENST00000417540 SRPK2P78362 688 aaKnown RBP14.65□□□□□ -0.06
HDLBP-206ENST00000417540 ACEP12821 1306 aa14.65□□□□□ -0.06
HDLBP-206ENST00000417540 CDK12Q9NYV4 1490 aaPredicted RBP14.64□□□□□ -0.07
HDLBP-206ENST00000417540 SBNO2Q9Y2G9 1366 aa14.64□□□□□ -0.07
HDLBP-206ENST00000417540 CARD11Q9BXL7 1154 aa14.64□□□□□ -0.07
HDLBP-206ENST00000417540 RGPD5Q99666 1765 aa14.63□□□□□ -0.07
HDLBP-206ENST00000417540 NUTM2GQ5VZR2 741 aa14.63□□□□□ -0.07
HDLBP-206ENST00000417540 NGDNQ8NEJ9 315 aaKnown RBP14.63□□□□□ -0.07
HDLBP-206ENST00000417540 THSD7AQ9UPZ6 1657 aa14.62□□□□□ -0.07
HDLBP-206ENST00000417540 PSME1Q06323 249 aa14.62□□□□□ -0.07
HDLBP-206ENST00000417540 ZNF772Q68DY9 489 aaPredicted RBP14.62□□□□□ -0.07
HDLBP-206ENST00000417540 SSH2Q76I76 1423 aa14.62□□□□□ -0.07
HDLBP-206ENST00000417540 LTN1O94822 1766 aa14.62□□□□□ -0.07
HDLBP-206ENST00000417540 NFAT5O94916 1531 aa14.61□□□□□ -0.07
HDLBP-206ENST00000417540 USP47Q96K76 1375 aa14.61□□□□□ -0.07
HDLBP-206ENST00000417540 COL18A1P39060 1754 aa14.61□□□□□ -0.07
HDLBP-206ENST00000417540 KIF20BQ96Q89 1820 aa14.6□□□□□ -0.07
HDLBP-206ENST00000417540 PAK3O75914 559 aaPredicted RBP14.6□□□□□ -0.07
HDLBP-206ENST00000417540 NGLY1Q96IV0 654 aa14.6□□□□□ -0.07
HDLBP-206ENST00000417540 USP21Q9UK80 565 aa14.6□□□□□ -0.07
HDLBP-206ENST00000417540 FNBP4Q8N3X1 1017 aaPredicted RBP14.59□□□□□ -0.07
HDLBP-206ENST00000417540 KIAA0232Q92628 1395 aa14.59□□□□□ -0.07
HDLBP-206ENST00000417540 CPSF1Q10570 1443 aaKnown RBP14.58□□□□□ -0.07
HDLBP-206ENST00000417540 PLEKHG3A1L390 1219 aa14.58□□□□□ -0.08
HDLBP-206ENST00000417540 RXRBP28702 533 aa14.58□□□□□ -0.08
HDLBP-206ENST00000417540 CCDC61Q9Y6R9 512 aa14.58□□□□□ -0.08
HDLBP-206ENST00000417540 USP19O94966 1318 aa14.58□□□□□ -0.08
HDLBP-206ENST00000417540 EVC2Q86UK5 1308 aa14.58□□□□□ -0.08
HDLBP-206ENST00000417540 SRCAPQ6ZRS2 3230 aa14.58□□□□□ -0.08
HDLBP-206ENST00000417540 HAP1P54257 671 aaPredicted RBP14.57□□□□□ -0.08
HDLBP-206ENST00000417540 CABP1Q9NZU7 370 aa14.57□□□□□ -0.08
HDLBP-206ENST00000417540 A0A1W2PP64 1363 aa14.57□□□□□ -0.08
HDLBP-206ENST00000417540 ATAD2Q6PL18 1390 aa14.57□□□□□ -0.08
HDLBP-206ENST00000417540 CAMTA1Q9Y6Y1 1673 aa14.56□□□□□ -0.08
HDLBP-206ENST00000417540 TESK2Q96S53 571 aa14.56□□□□□ -0.08
HDLBP-206ENST00000417540 LRRC37A3O60309 1634 aa14.55□□□□□ -0.08
HDLBP-206ENST00000417540 QTRT2Q9H974 415 aaKnown RBP14.55□□□□□ -0.08
HDLBP-206ENST00000417540 ST20-MTHFSA0A0A6YYL1 179 aa14.54□□□□□ -0.08
HDLBP-206ENST00000417540 CHRNA2Q15822 529 aa14.54□□□□□ -0.08
HDLBP-206ENST00000417540 TNS1Q9HBL0 1735 aaKnown RBP14.54□□□□□ -0.08
HDLBP-206ENST00000417540 COL5A2P05997 1499 aaPredicted RBP14.53□□□□□ -0.08
HDLBP-206ENST00000417540 TRPC5Q9UL62 973 aaPredicted RBP14.53□□□□□ -0.08
HDLBP-206ENST00000417540 OVOS2A0A0J9YW53 1432 aa14.52□□□□□ -0.08
HDLBP-206ENST00000417540 OVOS2Q6IE36 1432 aa14.52□□□□□ -0.08
HDLBP-206ENST00000417540 FAM83GA6ND36 823 aa14.52□□□□□ -0.09
HDLBP-206ENST00000417540 RBM6P78332 1123 aaKnown RBP14.52□□□□□ -0.09
HDLBP-206ENST00000417540 UNC5CLQ8IV45 518 aa14.52□□□□□ -0.09
HDLBP-206ENST00000417540 CCER1Q8TC90 406 aaPredicted RBP14.52□□□□□ -0.09
HDLBP-206ENST00000417540 KTN1Q86UP2 1357 aaKnown RBP14.51□□□□□ -0.09
HDLBP-206ENST00000417540 CLSPNQ9HAW4 1339 aa14.51□□□□□ -0.09
HDLBP-206ENST00000417540 ZRANB1Q9UGI0 708 aa14.51□□□□□ -0.09
HDLBP-206ENST00000417540 PARP4Q9UKK3 1724 aaKnown RBP14.51□□□□□ -0.09
HDLBP-206ENST00000417540 ZC3H6P61129 1189 aaKnown RBP14.5□□□□□ -0.09
HDLBP-206ENST00000417540 BTG4Q9NY30 223 aa14.5□□□□□ -0.09
HDLBP-206ENST00000417540 RGPD2P0DJD1 1756 aa14.5□□□□□ -0.09
HDLBP-206ENST00000417540 TTC21BQ7Z4L5 1316 aa14.49□□□□□ -0.09
HDLBP-206ENST00000417540 ABTB2Q8N961 1025 aa14.49□□□□□ -0.09
HDLBP-206ENST00000417540 PRDM11Q9NQV5 511 aa14.49□□□□□ -0.09
HDLBP-206ENST00000417540 PEAK1Q9H792 1746 aa14.49□□□□□ -0.09
HDLBP-206ENST00000417540 EDC4Q6P2E9 1401 aaKnown RBP14.49□□□□□ -0.09
HDLBP-206ENST00000417540 CPDO75976 1380 aa14.48□□□□□ -0.09
HDLBP-206ENST00000417540 SOX12O15370 315 aa14.48□□□□□ -0.09
HDLBP-206ENST00000417540 GJD4Q96KN9 370 aaPredicted RBP14.48□□□□□ -0.09
HDLBP-206ENST00000417540 ANKRD26Q9UPS8 1709 aa14.48□□□□□ -0.09
HDLBP-206ENST00000417540 ZBTB7CA1YPR0 619 aa14.47□□□□□ -0.09
HDLBP-206ENST00000417540 NME9Q86XW9 330 aa14.47□□□□□ -0.09
HDLBP-206ENST00000417540 SLC12A5Q9H2X9 1139 aa14.47□□□□□ -0.09
HDLBP-206ENST00000417540 VPS72Q15906 364 aa14.46□□□□□ -0.09
HDLBP-206ENST00000417540 TMC1Q8TDI8 760 aa14.46□□□□□ -0.09
HDLBP-206ENST00000417540 RGPD1P0DJD0 1748 aa14.46□□□□□ -0.1
HDLBP-206ENST00000417540 BRD4O60885 1362 aaPredicted RBP14.46□□□□□ -0.1
HDLBP-206ENST00000417540 ABCC6O95255 1503 aa14.46□□□□□ -0.1
HDLBP-206ENST00000417540 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.45□□□□□ -0.15e-7■■□□□ 13.4
HDLBP-206ENST00000417540 CCDC9Q9Y3X0 531 aaKnown RBP14.45□□□□□ -0.1
HDLBP-206ENST00000417540 FAM208AQ9UK61 1670 aaKnown RBP14.45□□□□□ -0.1
HDLBP-206ENST00000417540 STRN4Q9NRL3 753 aa14.44□□□□□ -0.1
HDLBP-206ENST00000417540 ANKRD36BQ8N2N9 1353 aa14.44□□□□□ -0.1
HDLBP-206ENST00000417540 SHANK3Q9BYB0 1731 aa14.44□□□□□ -0.1
HDLBP-206ENST00000417540 FAM98CQ17RN3 349 aaKnown RBP14.43□□□□□ -0.1
HDLBP-206ENST00000417540 SPATA31A5Q5VU36 1347 aa14.42□□□□□ -0.1
HDLBP-206ENST00000417540 SPATA31A7Q8IWB4 1347 aa14.42□□□□□ -0.1
HDLBP-206ENST00000417540 GCP02774 474 aa14.42□□□□□ -0.1
HDLBP-206ENST00000417540 NLRP6P59044 892 aa14.42□□□□□ -0.1
HDLBP-206ENST00000417540 USP31Q70CQ4 1352 aa14.42□□□□□ -0.1
HDLBP-206ENST00000417540 TTC21AQ8NDW8 1320 aa14.41□□□□□ -0.1
HDLBP-206ENST00000417540 NSD3Q9BZ95 1437 aa14.41□□□□□ -0.1
HDLBP-206ENST00000417540 SBF2Q86WG5 1849 aa14.41□□□□□ -0.1
HDLBP-206ENST00000417540 LARP1Q6PKG0 1096 aaKnown RBP14.41□□□□□ -0.1
HDLBP-206ENST00000417540 NINLQ9Y2I6 1382 aa14.41□□□□□ -0.1
HDLBP-206ENST00000417540 SPATA31A1Q5TZJ5 1347 aa14.41□□□□□ -0.1
HDLBP-206ENST00000417540 NLRP13Q86W25 1043 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 163.3 ms