RNA–Protein interactions for RNA: ENST00000416093.1

RAF1-202, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene RAF1, Length 962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-202ENST00000416093 GLI3P10071 1580 aa21.28■■□□□ 1
RAF1-202ENST00000416093 VPS72Q15906 364 aa21.27■■□□□ 1
RAF1-202ENST00000416093 CCDC61Q9Y6R9 512 aa21.27■■□□□ 1
RAF1-202ENST00000416093 CENPJQ9HC77 1338 aaPredicted RBP21.27■□□□□ 0.99
RAF1-202ENST00000416093 ACEP12821 1306 aa21.26■□□□□ 0.99
RAF1-202ENST00000416093 ROCK2O75116 1388 aaKnown RBP21.25■□□□□ 0.99
RAF1-202ENST00000416093 PLCH1Q4KWH8 1693 aa21.25■□□□□ 0.99
RAF1-202ENST00000416093 ITSN1Q15811 1721 aa21.25■□□□□ 0.99
RAF1-202ENST00000416093 CCDC9Q9Y3X0 531 aaKnown RBP21.25■□□□□ 0.99
RAF1-202ENST00000416093 TRPM1Q7Z4N2 1603 aa21.25■□□□□ 0.99
RAF1-202ENST00000416093 PLEKHG3A1L390 1219 aa21.24■□□□□ 0.99
RAF1-202ENST00000416093 CABP2Q9NPB3 220 aa21.23■□□□□ 0.99
RAF1-202ENST00000416093 BTG4Q9NY30 223 aa21.23■□□□□ 0.99
RAF1-202ENST00000416093 NWD2Q9ULI1 1742 aa21.23■□□□□ 0.99
RAF1-202ENST00000416093 POLR3AO14802 1390 aaPredicted RBP21.23■□□□□ 0.99
RAF1-202ENST00000416093 SRPK2P78362 688 aaKnown RBP21.22■□□□□ 0.99
RAF1-202ENST00000416093 NUTM2GQ5VZR2 741 aa21.22■□□□□ 0.99
RAF1-202ENST00000416093 SEPT12Q8IYM1 358 aa21.21■□□□□ 0.99
RAF1-202ENST00000416093 TOPAZ1Q8N9V7 1692 aa21.21■□□□□ 0.99
RAF1-202ENST00000416093 CRYBG1Q9Y4K1 1723 aa21.19■□□□□ 0.98
RAF1-202ENST00000416093 ONECUT3O60422 494 aaPredicted RBP21.19■□□□□ 0.98
RAF1-202ENST00000416093 CARD11Q9BXL7 1154 aa21.19■□□□□ 0.98
RAF1-202ENST00000416093 PRDM11Q9NQV5 511 aa21.18■□□□□ 0.98
RAF1-202ENST00000416093 COL14A1Q05707 1796 aaKnown RBP21.18■□□□□ 0.98
RAF1-202ENST00000416093 PPIP5K1Q6PFW1 1433 aa21.17■□□□□ 0.98
RAF1-202ENST00000416093 QRICH2Q9H0J4 1663 aa21.17■□□□□ 0.98
RAF1-202ENST00000416093 NRAPQ86VF7 1730 aa21.17■□□□□ 0.98
RAF1-202ENST00000416093 BRWD3Q6RI45 1802 aa21.16■□□□□ 0.98
RAF1-202ENST00000416093 ZC3H6P61129 1189 aaKnown RBP21.16■□□□□ 0.98
RAF1-202ENST00000416093 CHRNA2Q15822 529 aa21.16■□□□□ 0.98
RAF1-202ENST00000416093 KIAA0232Q92628 1395 aa21.15■□□□□ 0.98
RAF1-202ENST00000416093 FAM98CQ17RN3 349 aaKnown RBP21.15■□□□□ 0.98
RAF1-202ENST00000416093 ABTB2Q8N961 1025 aa21.15■□□□□ 0.98
RAF1-202ENST00000416093 CABP1Q9NZU7 370 aa21.15■□□□□ 0.98
RAF1-202ENST00000416093 CCDC125Q86Z20 511 aa21.14■□□□□ 0.97
RAF1-202ENST00000416093 PHRF1Q9P1Y6 1649 aaKnown RBP21.12■□□□□ 0.97
RAF1-202ENST00000416093 SPATA31A5Q5VU36 1347 aa21.12■□□□□ 0.97
RAF1-202ENST00000416093 SPATA31A7Q8IWB4 1347 aa21.12■□□□□ 0.97
RAF1-202ENST00000416093 A0A0G2JS52 829 aa21.12■□□□□ 0.97
RAF1-202ENST00000416093 MYT1Q01538 1121 aa21.12■□□□□ 0.97
RAF1-202ENST00000416093 KRT27Q7Z3Y8 459 aa21.12■□□□□ 0.97
RAF1-202ENST00000416093 EVC2Q86UK5 1308 aa21.11■□□□□ 0.97
RAF1-202ENST00000416093 EP400Q96L91 3159 aa21.1■□□□□ 0.97
RAF1-202ENST00000416093 NLRP13Q86W25 1043 aa21.09■□□□□ 0.97
RAF1-202ENST00000416093 STRN4Q9NRL3 753 aa21.09■□□□□ 0.97
RAF1-202ENST00000416093 USP19O94966 1318 aa21.08■□□□□ 0.97
RAF1-202ENST00000416093 BLMP54132 1417 aaPredicted RBP21.07■□□□□ 0.96
RAF1-202ENST00000416093 USP6P35125 1406 aa21.06■□□□□ 0.96
RAF1-202ENST00000416093 GCP02774 474 aa21.06■□□□□ 0.96
RAF1-202ENST00000416093 DEFB132Q7Z7B7 95 aa21.06■□□□□ 0.96
RAF1-202ENST00000416093 BRD4O60885 1362 aaPredicted RBP21.06■□□□□ 0.96
RAF1-202ENST00000416093 SPATA31A1Q5TZJ5 1347 aa21.05■□□□□ 0.96
RAF1-202ENST00000416093 EVA1CP58658 441 aa21.05■□□□□ 0.96
RAF1-202ENST00000416093 NRKQ7Z2Y5 1582 aa21.05■□□□□ 0.96
RAF1-202ENST00000416093 NLRP6P59044 892 aa21.04■□□□□ 0.96
RAF1-202ENST00000416093 FAM182BQ5T319 152 aa21.04■□□□□ 0.96
RAF1-202ENST00000416093 CPDO75976 1380 aa21.03■□□□□ 0.96
RAF1-202ENST00000416093 SF3B2Q13435 895 aaKnown RBP21.03■□□□□ 0.96
RAF1-202ENST00000416093 SSH2Q76I76 1423 aa21.03■□□□□ 0.96
RAF1-202ENST00000416093 CAMTA1Q9Y6Y1 1673 aa21.02■□□□□ 0.96
RAF1-202ENST00000416093 ZRANB1Q9UGI0 708 aa21.02■□□□□ 0.96
RAF1-202ENST00000416093 ST20-MTHFSA0A0A6YYL1 179 aa21.01■□□□□ 0.95
RAF1-202ENST00000416093 LARP1Q6PKG0 1096 aaKnown RBP21.01■□□□□ 0.95
RAF1-202ENST00000416093 USP35Q9P2H5 1018 aa21.01■□□□□ 0.95
RAF1-202ENST00000416093 ZBTB7CA1YPR0 619 aa21■□□□□ 0.95
RAF1-202ENST00000416093 ZNF692Q9BU19 519 aaPredicted RBP21■□□□□ 0.95
RAF1-202ENST00000416093 TTC21BQ7Z4L5 1316 aa21■□□□□ 0.95
RAF1-202ENST00000416093 THSD7AQ9UPZ6 1657 aa20.99■□□□□ 0.95
RAF1-202ENST00000416093 USP47Q96K76 1375 aa20.99■□□□□ 0.95
RAF1-202ENST00000416093 LMO7Q8WWI1 1683 aa20.98■□□□□ 0.95
RAF1-202ENST00000416093 SBNO2Q9Y2G9 1366 aa20.97■□□□□ 0.95
RAF1-202ENST00000416093 SLIT3O75094 1523 aa20.96■□□□□ 0.95
RAF1-202ENST00000416093 BARGINQ6ZT62 677 aa20.96■□□□□ 0.95
RAF1-202ENST00000416093 PIK3C2AO00443 1686 aa20.96■□□□□ 0.95
RAF1-202ENST00000416093 CPSF1Q10570 1443 aaKnown RBP20.95■□□□□ 0.95
RAF1-202ENST00000416093 SLC24A1O60721 1099 aa20.94■□□□□ 0.94
RAF1-202ENST00000416093 TCP11L2Q8N4U5 519 aa20.94■□□□□ 0.94
RAF1-202ENST00000416093 TESK2Q96S53 571 aa20.94■□□□□ 0.94
RAF1-202ENST00000416093 AKAP12Q02952 1782 aa20.94■□□□□ 0.94
RAF1-202ENST00000416093 KTN1Q86UP2 1357 aaKnown RBP20.94■□□□□ 0.94
RAF1-202ENST00000416093 BAG6P46379 1132 aa20.93■□□□□ 0.94
RAF1-202ENST00000416093 TTC21AQ8NDW8 1320 aa20.93■□□□□ 0.94
RAF1-202ENST00000416093 AATKQ6ZMQ8 1374 aa20.93■□□□□ 0.94
RAF1-202ENST00000416093 COL5A2P05997 1499 aaPredicted RBP20.93■□□□□ 0.94
RAF1-202ENST00000416093 SOX12O15370 315 aa20.92■□□□□ 0.94
RAF1-202ENST00000416093 EIF4G2P78344 907 aaKnown RBP eCLIP20.91■□□□□ 0.94
RAF1-202ENST00000416093 EN1Q05925 392 aaPredicted RBP20.91■□□□□ 0.94
RAF1-202ENST00000416093 TMC1Q8TDI8 760 aa20.91■□□□□ 0.94
RAF1-202ENST00000416093 SLC12A5Q9H2X9 1139 aa20.91■□□□□ 0.94
RAF1-202ENST00000416093 AXIN2Q9Y2T1 843 aa20.91■□□□□ 0.94
RAF1-202ENST00000416093 PDE3BQ13370 1112 aa20.9■□□□□ 0.94
RAF1-202ENST00000416093 ARHGEF25Q86VW2 580 aa20.9■□□□□ 0.94
RAF1-202ENST00000416093 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.9■□□□□ 0.94
RAF1-202ENST00000416093 THRAP3Q9Y2W1 955 aaKnown RBP20.9■□□□□ 0.94
RAF1-202ENST00000416093 FAM196AQ6ZSG2 479 aa20.89■□□□□ 0.93
RAF1-202ENST00000416093 KCNH5Q8NCM2 988 aa20.89■□□□□ 0.93
RAF1-202ENST00000416093 COL18A1P39060 1754 aa20.88■□□□□ 0.93
RAF1-202ENST00000416093 TRIM37O94972 964 aa20.88■□□□□ 0.93
RAF1-202ENST00000416093 HSPA5P11021 654 aaKnown RBP20.88■□□□□ 0.93
RAF1-202ENST00000416093 TMF1P82094 1093 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 172.8 ms