RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 BAG6P46379 1132 aa22.69■■□□□ 1.22
DDX56-202ENST00000415758 SPATA31A5Q5VU36 1347 aa22.68■■□□□ 1.22
DDX56-202ENST00000415758 SPATA31A7Q8IWB4 1347 aa22.68■■□□□ 1.22
DDX56-202ENST00000415758 A0A0G2JS52 829 aa22.67■■□□□ 1.22
DDX56-202ENST00000415758 MYT1Q01538 1121 aa22.67■■□□□ 1.22
DDX56-202ENST00000415758 CRYBG1Q9Y4K1 1723 aa22.67■■□□□ 1.22
DDX56-202ENST00000415758 DCAF11Q8TEB1 546 aa22.66■■□□□ 1.22
DDX56-202ENST00000415758 NGDNQ8NEJ9 315 aaKnown RBP22.65■■□□□ 1.22
DDX56-202ENST00000415758 KDM2AQ9Y2K7 1162 aa22.65■■□□□ 1.22
DDX56-202ENST00000415758 RGPD1P0DJD0 1748 aa22.62■■□□□ 1.21
DDX56-202ENST00000415758 THSD7AQ9UPZ6 1657 aa22.62■■□□□ 1.21
DDX56-202ENST00000415758 DISP2A7MBM2 1401 aa22.61■■□□□ 1.21
DDX56-202ENST00000415758 PAK3O75914 559 aaPredicted RBP22.61■■□□□ 1.21
DDX56-202ENST00000415758 HRCP23327 699 aa22.61■■□□□ 1.21
DDX56-202ENST00000415758 PRDM11Q9NQV5 511 aa22.61■■□□□ 1.21
DDX56-202ENST00000415758 NUDT16Q96DE0 195 aaKnown RBP22.6■■□□□ 1.21
DDX56-202ENST00000415758 ATP7BP35670 1465 aa22.6■■□□□ 1.21
DDX56-202ENST00000415758 ITSN1Q15811 1721 aa22.6■■□□□ 1.21
DDX56-202ENST00000415758 PSDA5PKW4 1024 aaPredicted RBP22.59■■□□□ 1.21
DDX56-202ENST00000415758 EN1Q05925 392 aaPredicted RBP22.59■■□□□ 1.21
DDX56-202ENST00000415758 ARHGEF28Q8N1W1 1705 aaKnown RBP22.59■■□□□ 1.21
DDX56-202ENST00000415758 SPATA31A1Q5TZJ5 1347 aa22.58■■□□□ 1.21
DDX56-202ENST00000415758 FAM182BQ5T319 152 aa22.58■■□□□ 1.21
DDX56-202ENST00000415758 KIAA0232Q92628 1395 aa22.57■■□□□ 1.2
DDX56-202ENST00000415758 POLR3AO14802 1390 aaPredicted RBP22.55■■□□□ 1.2
DDX56-202ENST00000415758 TNS1Q9HBL0 1735 aaKnown RBP22.55■■□□□ 1.2
DDX56-202ENST00000415758 PHRF1Q9P1Y6 1649 aaKnown RBP22.53■■□□□ 1.2
DDX56-202ENST00000415758 FAM196AQ6ZSG2 479 aa22.53■■□□□ 1.2
DDX56-202ENST00000415758 CDK19Q9BWU1 502 aa22.53■■□□□ 1.2
DDX56-202ENST00000415758 CHRNA2Q15822 529 aa22.52■■□□□ 1.2
DDX56-202ENST00000415758 CCDC61Q9Y6R9 512 aa22.52■■□□□ 1.2
DDX56-202ENST00000415758 PLEKHG3A1L390 1219 aa22.51■■□□□ 1.19
DDX56-202ENST00000415758 ZC3H6P61129 1189 aaKnown RBP22.51■■□□□ 1.19
DDX56-202ENST00000415758 NBPF8Q3BBV2 869 aa22.51■■□□□ 1.19
DDX56-202ENST00000415758 CAMKK2Q96RR4 588 aa22.51■■□□□ 1.19
DDX56-202ENST00000415758 TOPAZ1Q8N9V7 1692 aa22.5■■□□□ 1.19
DDX56-202ENST00000415758 R3HDM1Q15032 1099 aaKnown RBP22.5■■□□□ 1.19
DDX56-202ENST00000415758 EZH2Q15910 746 aaKnown RBP22.5■■□□□ 1.19
DDX56-202ENST00000415758 BARGINQ6ZT62 677 aa22.5■■□□□ 1.19
DDX56-202ENST00000415758 ACEP12821 1306 aa22.5■■□□□ 1.19
DDX56-202ENST00000415758 STRN4Q9NRL3 753 aa22.49■■□□□ 1.19
DDX56-202ENST00000415758 TRIM37O94972 964 aa22.48■■□□□ 1.19
DDX56-202ENST00000415758 PARD3Q8TEW0 1356 aa22.48■■□□□ 1.19
DDX56-202ENST00000415758 NUTM2GQ5VZR2 741 aa22.47■■□□□ 1.19
DDX56-202ENST00000415758 KIAA1210Q9ULL0 1709 aa22.47■■□□□ 1.19
DDX56-202ENST00000415758 SSH2Q76I76 1423 aa22.47■■□□□ 1.19
DDX56-202ENST00000415758 EVA1CP58658 441 aa22.46■■□□□ 1.19
DDX56-202ENST00000415758 CPDO75976 1380 aa22.46■■□□□ 1.19
DDX56-202ENST00000415758 CAMTA1Q9Y6Y1 1673 aa22.46■■□□□ 1.19
DDX56-202ENST00000415758 ABTB2Q8N961 1025 aa22.45■■□□□ 1.18
DDX56-202ENST00000415758 USP19O94966 1318 aa22.44■■□□□ 1.18
DDX56-202ENST00000415758 APBA3O96018 575 aa22.44■■□□□ 1.18
DDX56-202ENST00000415758 NRKQ7Z2Y5 1582 aa22.44■■□□□ 1.18
DDX56-202ENST00000415758 LMO7Q8WWI1 1683 aa22.43■■□□□ 1.18
DDX56-202ENST00000415758 PDE3BQ13370 1112 aa22.43■■□□□ 1.18
DDX56-202ENST00000415758 USP35Q9P2H5 1018 aa22.43■■□□□ 1.18
DDX56-202ENST00000415758 LARP1Q6PKG0 1096 aaKnown RBP22.42■■□□□ 1.18
DDX56-202ENST00000415758 TCP11L2Q8N4U5 519 aa22.42■■□□□ 1.18
DDX56-202ENST00000415758 THRAP3Q9Y2W1 955 aaKnown RBP22.42■■□□□ 1.18
DDX56-202ENST00000415758 NLRP13Q86W25 1043 aa22.4■■□□□ 1.18
DDX56-202ENST00000415758 BRD4O60885 1362 aaPredicted RBP22.39■■□□□ 1.18
DDX56-202ENST00000415758 GCP02774 474 aa22.39■■□□□ 1.17
DDX56-202ENST00000415758 NBPF1Q3BBV0 1214 aa22.39■■□□□ 1.17
DDX56-202ENST00000415758 RREB1Q92766 1687 aa22.39■■□□□ 1.17
DDX56-202ENST00000415758 C11orf95C9JLR9 678 aaPredicted RBP22.36■■□□□ 1.17
DDX56-202ENST00000415758 PPIP5K1Q6PFW1 1433 aa22.36■■□□□ 1.17
DDX56-202ENST00000415758 NUP188Q5SRE5 1749 aa22.35■■□□□ 1.17
DDX56-202ENST00000415758 PARP4Q9UKK3 1724 aaKnown RBP22.35■■□□□ 1.17
DDX56-202ENST00000415758 SRPK2P78362 688 aaKnown RBP22.35■■□□□ 1.17
DDX56-202ENST00000415758 COL5A2P05997 1499 aaPredicted RBP22.34■■□□□ 1.17
DDX56-202ENST00000415758 CENPJQ9HC77 1338 aaPredicted RBP22.34■■□□□ 1.17
DDX56-202ENST00000415758 NBPF14Q5TI25 921 aa22.34■■□□□ 1.17
DDX56-202ENST00000415758 CRB1P82279 1406 aa22.32■■□□□ 1.16
DDX56-202ENST00000415758 CABP2Q9NPB3 220 aa22.32■■□□□ 1.16
DDX56-202ENST00000415758 AATKQ6ZMQ8 1374 aa22.31■■□□□ 1.16
DDX56-202ENST00000415758 USP6P35125 1406 aa22.3■■□□□ 1.16
DDX56-202ENST00000415758 CABP1Q9NZU7 370 aa22.29■■□□□ 1.16
DDX56-202ENST00000415758 SLIT3O75094 1523 aa22.29■■□□□ 1.16
DDX56-202ENST00000415758 PEAK1Q9H792 1746 aa22.28■■□□□ 1.16
DDX56-202ENST00000415758 NLRP6P59044 892 aa22.28■■□□□ 1.16
DDX56-202ENST00000415758 PLSCR1O15162 318 aa22.27■■□□□ 1.16
DDX56-202ENST00000415758 QRICH2Q9H0J4 1663 aa22.26■■□□□ 1.15
DDX56-202ENST00000415758 OVOS2A0A0G2JMS6 1433 aa22.26■■□□□ 1.15
DDX56-202ENST00000415758 OVOS2A0A0J9YW53 1432 aa22.26■■□□□ 1.15
DDX56-202ENST00000415758 OVOS2Q6IE36 1432 aa22.26■■□□□ 1.15
DDX56-202ENST00000415758 RGPD3A6NKT7 1758 aaPredicted RBP22.25■■□□□ 1.15
DDX56-202ENST00000415758 COL18A1P39060 1754 aa22.25■■□□□ 1.15
DDX56-202ENST00000415758 RGPD4Q7Z3J3 1758 aa22.25■■□□□ 1.15
DDX56-202ENST00000415758 SBF2Q86WG5 1849 aa22.25■■□□□ 1.15
DDX56-202ENST00000415758 SPON1Q9HCB6 807 aa22.25■■□□□ 1.15
DDX56-202ENST00000415758 KCNQ2O43526 872 aa22.23■■□□□ 1.15
DDX56-202ENST00000415758 DDB1Q16531 1140 aa22.23■■□□□ 1.15
DDX56-202ENST00000415758 LRRC37A3O60309 1634 aa22.22■■□□□ 1.15
DDX56-202ENST00000415758 TOM1L2Q6ZVM7 507 aa22.22■■□□□ 1.15
DDX56-202ENST00000415758 BCL9O00512 1426 aa22.22■■□□□ 1.15
DDX56-202ENST00000415758 PIK3C2AO00443 1686 aa22.21■■□□□ 1.15
DDX56-202ENST00000415758 ZNF692Q9BU19 519 aaPredicted RBP22.21■■□□□ 1.15
DDX56-202ENST00000415758 CDCA7Q9BWT1 371 aaPredicted RBP22.21■■□□□ 1.15
DDX56-202ENST00000415758 BCL11BQ9C0K0 894 aaPredicted RBP22.21■■□□□ 1.15
DDX56-202ENST00000415758 AXIN2Q9Y2T1 843 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms