RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 BRCA1P38398 1863 aaKnown RBP9.82□□□□□ -0.84
LMBR1-204ENST00000415428 VGFO15240 615 aaPredicted RBP9.81□□□□□ -0.84
LMBR1-204ENST00000415428 NFAT5O94916 1531 aa9.81□□□□□ -0.84
LMBR1-204ENST00000415428 RRP7BPQ9NSQ0 103 aa9.81□□□□□ -0.84
LMBR1-204ENST00000415428 TAF1LQ8IZX4 1826 aa9.8□□□□□ -0.84
LMBR1-204ENST00000415428 RBM33Q96EV2 1170 aaKnown RBP9.8□□□□□ -0.84
LMBR1-204ENST00000415428 ATP1B4Q9UN42 357 aaPredicted RBP9.8□□□□□ -0.84
LMBR1-204ENST00000415428 ANKRD26Q9UPS8 1709 aa9.8□□□□□ -0.84
LMBR1-204ENST00000415428 PLSCR1O15162 318 aa9.79□□□□□ -0.84
LMBR1-204ENST00000415428 C8orf37Q96NL8 207 aa9.79□□□□□ -0.84
LMBR1-204ENST00000415428 BTAF1O14981 1849 aa9.79□□□□□ -0.84
LMBR1-204ENST00000415428 SPATA31A1Q5TZJ5 1347 aa9.79□□□□□ -0.84
LMBR1-204ENST00000415428 KRT27Q7Z3Y8 459 aa9.79□□□□□ -0.84
LMBR1-204ENST00000415428 BAG6P46379 1132 aa9.79□□□□□ -0.84
LMBR1-204ENST00000415428 THSD7BQ9C0I4 1608 aa9.78□□□□□ -0.84
LMBR1-204ENST00000415428 COL5A2P05997 1499 aaPredicted RBP9.78□□□□□ -0.84
LMBR1-204ENST00000415428 WDR90Q96KV7 1748 aa9.77□□□□□ -0.84
LMBR1-204ENST00000415428 SEPT12Q8IYM1 358 aa9.77□□□□□ -0.85
LMBR1-204ENST00000415428 TOGARAM1Q9Y4F4 1720 aa9.77□□□□□ -0.85
LMBR1-204ENST00000415428 ARFGEF1Q9Y6D6 1849 aa9.76□□□□□ -0.85
LMBR1-204ENST00000415428 PKD1L3Q7Z443 1732 aa9.76□□□□□ -0.85
LMBR1-204ENST00000415428 TNRC6CQ9HCJ0 1690 aaKnown RBP9.76□□□□□ -0.85
LMBR1-204ENST00000415428 STAG3Q9UJ98 1225 aa9.76□□□□□ -0.85
LMBR1-204ENST00000415428 PSME1Q06323 249 aa9.75□□□□□ -0.85
LMBR1-204ENST00000415428 DLEC1Q9Y238 1755 aa9.75□□□□□ -0.85
LMBR1-204ENST00000415428 C5P01031 1676 aa9.75□□□□□ -0.85
LMBR1-204ENST00000415428 C14orf93Q9H972 538 aaKnown RBP9.75□□□□□ -0.85
LMBR1-204ENST00000415428 OVOS2A0A0G2JMS6 1433 aa9.74□□□□□ -0.85
LMBR1-204ENST00000415428 OVOS2A0A0J9YW53 1432 aa9.74□□□□□ -0.85
LMBR1-204ENST00000415428 OVOS2Q6IE36 1432 aa9.74□□□□□ -0.85
LMBR1-204ENST00000415428 FAM196AQ6ZSG2 479 aa9.73□□□□□ -0.85
LMBR1-204ENST00000415428 ORAI2Q96SN7 254 aa9.73□□□□□ -0.85
LMBR1-204ENST00000415428 KIAA0232Q92628 1395 aa9.72□□□□□ -0.85
LMBR1-204ENST00000415428 MAP2P11137 1827 aaKnown RBP9.72□□□□□ -0.85
LMBR1-204ENST00000415428 PXDNLA1KZ92 1463 aa9.72□□□□□ -0.85
LMBR1-204ENST00000415428 NUTM2BA6NNL0 878 aaPredicted RBP9.72□□□□□ -0.85
LMBR1-204ENST00000415428 NUTM2EB1AL46 878 aaPredicted RBP9.72□□□□□ -0.85
LMBR1-204ENST00000415428 NUTM2DQ5VT03 806 aaPredicted RBP9.72□□□□□ -0.85
LMBR1-204ENST00000415428 NUTM2AQ8IVF1 878 aaPredicted RBP9.72□□□□□ -0.85
LMBR1-204ENST00000415428 TNS2Q63HR2 1409 aa9.71□□□□□ -0.85
LMBR1-204ENST00000415428 PTGER2P43116 358 aa9.71□□□□□ -0.85
LMBR1-204ENST00000415428 RGPD5Q99666 1765 aa9.71□□□□□ -0.86
LMBR1-204ENST00000415428 CRB1P82279 1406 aa9.7□□□□□ -0.86
LMBR1-204ENST00000415428 KCNQ2O43526 872 aa9.7□□□□□ -0.86
LMBR1-204ENST00000415428 NCAPD2Q15021 1401 aa9.7□□□□□ -0.86
LMBR1-204ENST00000415428 PLEKHH1Q9ULM0 1364 aa9.69□□□□□ -0.86
LMBR1-204ENST00000415428 LTN1O94822 1766 aa9.69□□□□□ -0.86
LMBR1-204ENST00000415428 ARFGEF2Q9Y6D5 1785 aa9.68□□□□□ -0.86
LMBR1-204ENST00000415428 FAM83GA6ND36 823 aa9.68□□□□□ -0.86
LMBR1-204ENST00000415428 RANGAP1P46060 587 aaPredicted RBP9.68□□□□□ -0.86
LMBR1-204ENST00000415428 NRXN2Q9P2S2 1712 aa9.68□□□□□ -0.86
LMBR1-204ENST00000415428 COL5A3P25940 1745 aaPredicted RBP9.68□□□□□ -0.86
LMBR1-204ENST00000415428 UBR3Q6ZT12 1888 aa9.68□□□□□ -0.86
LMBR1-204ENST00000415428 CDCA7Q9BWT1 371 aaPredicted RBP9.66□□□□□ -0.86
LMBR1-204ENST00000415428 PLEKHG3A1L390 1219 aa9.66□□□□□ -0.86
LMBR1-204ENST00000415428 NSD2O96028 1365 aa9.66□□□□□ -0.86
LMBR1-204ENST00000415428 USP31Q70CQ4 1352 aa9.66□□□□□ -0.86
LMBR1-204ENST00000415428 KRT28Q7Z3Y7 464 aa9.65□□□□□ -0.86
LMBR1-204ENST00000415428 ADAMTS7Q9UKP4 1686 aa9.65□□□□□ -0.86
LMBR1-204ENST00000415428 EP400Q96L91 3159 aa9.65□□□□□ -0.86
LMBR1-204ENST00000415428 DOT1LQ8TEK3 1739 aa9.65□□□□□ -0.87
LMBR1-204ENST00000415428 SF3B2Q13435 895 aaKnown RBP9.65□□□□□ -0.87
LMBR1-204ENST00000415428 VIRMAQ69YN4 1812 aaKnown RBP9.64□□□□□ -0.87
LMBR1-204ENST00000415428 C1QTNF8P60827 252 aa9.64□□□□□ -0.87
LMBR1-204ENST00000415428 PHF8Q9UPP1 1060 aa9.63□□□□□ -0.87
LMBR1-204ENST00000415428 DEFB132Q7Z7B7 95 aa9.63□□□□□ -0.87
LMBR1-204ENST00000415428 YY1P25490 414 aa9.62□□□□□ -0.87
LMBR1-204ENST00000415428 BCL11BQ9C0K0 894 aaPredicted RBP9.62□□□□□ -0.87
LMBR1-204ENST00000415428 SPON1Q9HCB6 807 aa9.62□□□□□ -0.87
LMBR1-204ENST00000415428 CPSF1Q10570 1443 aaKnown RBP9.62□□□□□ -0.87
LMBR1-204ENST00000415428 DDX17Q92841 729 aaKnown RBP9.61□□□□□ -0.87
LMBR1-204ENST00000415428 SBNO2Q9Y2G9 1366 aa9.61□□□□□ -0.87
LMBR1-204ENST00000415428 ZNF784Q8NCA9 323 aaPredicted RBP9.61□□□□□ -0.87
LMBR1-204ENST00000415428 HMGB2P26583 209 aaKnown RBP9.6□□□□□ -0.87
LMBR1-204ENST00000415428 SLC16A10Q8TF71 515 aa9.6□□□□□ -0.87
LMBR1-204ENST00000415428 CCDC7Q96M83 1385 aa9.6□□□□□ -0.87
LMBR1-204ENST00000415428 ADGRF5Q8IZF2 1346 aa9.6□□□□□ -0.87
LMBR1-204ENST00000415428 PRR36Q9H6K5 1346 aa9.6□□□□□ -0.87
LMBR1-204ENST00000415428 ADAMTS2O95450 1211 aa9.59□□□□□ -0.87
LMBR1-204ENST00000415428 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.59□□□□□ -0.871e-6■■□□□ 12
LMBR1-204ENST00000415428 NBPF8Q3BBV2 869 aa9.58□□□□□ -0.88
LMBR1-204ENST00000415428 NBPF14Q5TI25 921 aa9.58□□□□□ -0.88
LMBR1-204ENST00000415428 SLC34A2O95436 690 aa9.58□□□□□ -0.88
LMBR1-204ENST00000415428 EZH2Q15910 746 aaKnown RBP9.58□□□□□ -0.88
LMBR1-204ENST00000415428 LAMB1P07942 1786 aa9.57□□□□□ -0.88
LMBR1-204ENST00000415428 USP6P35125 1406 aa9.57□□□□□ -0.88
LMBR1-204ENST00000415428 ADAMTSL1Q8N6G6 1762 aa9.57□□□□□ -0.88
LMBR1-204ENST00000415428 PCDH10Q9P2E7 1040 aa9.57□□□□□ -0.88
LMBR1-204ENST00000415428 GPRASP1Q5JY77 1395 aa9.57□□□□□ -0.88
LMBR1-204ENST00000415428 C14orf37Q86TY3 774 aa9.57□□□□□ -0.88
LMBR1-204ENST00000415428 KDM6AO15550 1401 aaPredicted RBP9.56□□□□□ -0.88
LMBR1-204ENST00000415428 JMYQ8N9B5 988 aa9.56□□□□□ -0.88
LMBR1-204ENST00000415428 DICER1Q9UPY3 1922 aaKnown RBP9.56□□□□□ -0.88
LMBR1-204ENST00000415428 C4BP0C0L5 1744 aa9.56□□□□□ -0.88
LMBR1-204ENST00000415428 ITGB4P16144 1822 aa9.56□□□□□ -0.88
LMBR1-204ENST00000415428 MTFR1LQ9H019 292 aa9.56□□□□□ -0.88
LMBR1-204ENST00000415428 ESCO1Q5FWF5 840 aa9.55□□□□□ -0.88
LMBR1-204ENST00000415428 AKT1S1Q96B36 256 aa9.55□□□□□ -0.88
LMBR1-204ENST00000415428 EN1Q05925 392 aaPredicted RBP9.54□□□□□ -0.88
LMBR1-204ENST00000415428 TCP11L2Q8N4U5 519 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms