RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 A0A1W2PP64 1363 aa16.59■□□□□ 0.25
ATG4B-207ENST00000415107 EDC4Q6P2E9 1401 aaKnown RBP16.59■□□□□ 0.25
ATG4B-207ENST00000415107 TERF2IPQ9NYB0 399 aa16.58■□□□□ 0.24
ATG4B-207ENST00000415107 SPATA31A6Q5VVP1 1343 aa16.58■□□□□ 0.24
ATG4B-207ENST00000415107 CRYBG1Q9Y4K1 1723 aa16.57■□□□□ 0.24
ATG4B-207ENST00000415107 KIF7Q2M1P5 1343 aa16.57■□□□□ 0.24
ATG4B-207ENST00000415107 TTC21AQ8NDW8 1320 aa16.57■□□□□ 0.24
ATG4B-207ENST00000415107 C11orf95C9JLR9 678 aaPredicted RBP16.57■□□□□ 0.24
ATG4B-207ENST00000415107 SLC12A5Q9H2X9 1139 aa16.57■□□□□ 0.24
ATG4B-207ENST00000415107 KTN1Q86UP2 1357 aaKnown RBP16.56■□□□□ 0.24
ATG4B-207ENST00000415107 CCDC7Q96M83 1385 aa16.56■□□□□ 0.24
ATG4B-207ENST00000415107 HDGFL2Q7Z4V5 671 aaPredicted RBP16.56■□□□□ 0.24
ATG4B-207ENST00000415107 ABCA3Q99758 1704 aa16.55■□□□□ 0.24
ATG4B-207ENST00000415107 PIK3C2AO00443 1686 aa16.55■□□□□ 0.24
ATG4B-207ENST00000415107 TMC1Q8TDI8 760 aa16.54■□□□□ 0.24
ATG4B-207ENST00000415107 WASHC2AQ641Q2 1341 aa16.53■□□□□ 0.24
ATG4B-207ENST00000415107 TTC21BQ7Z4L5 1316 aa16.53■□□□□ 0.24
ATG4B-207ENST00000415107 XPCQ01831 940 aaPredicted RBP16.53■□□□□ 0.24
ATG4B-207ENST00000415107 USP31Q70CQ4 1352 aa16.52■□□□□ 0.24
ATG4B-207ENST00000415107 USP19O94966 1318 aa16.51■□□□□ 0.23
ATG4B-207ENST00000415107 SLIT3O75094 1523 aa16.51■□□□□ 0.23
ATG4B-207ENST00000415107 MARF1Q9Y4F3 1742 aaKnown RBP16.51■□□□□ 0.23
ATG4B-207ENST00000415107 PHRF1Q9P1Y6 1649 aaKnown RBP16.51■□□□□ 0.23
ATG4B-207ENST00000415107 LRP6O75581 1613 aa16.49■□□□□ 0.23
ATG4B-207ENST00000415107 OVOS2A0A0J9YW53 1432 aa16.49■□□□□ 0.23
ATG4B-207ENST00000415107 OVOS2Q6IE36 1432 aa16.49■□□□□ 0.23
ATG4B-207ENST00000415107 NSD3Q9BZ95 1437 aa16.47■□□□□ 0.23
ATG4B-207ENST00000415107 ABTB2Q8N961 1025 aa16.47■□□□□ 0.23
ATG4B-207ENST00000415107 KIF20BQ96Q89 1820 aa16.47■□□□□ 0.23
ATG4B-207ENST00000415107 PAK3O75914 559 aaPredicted RBP16.46■□□□□ 0.23
ATG4B-207ENST00000415107 NLRP13Q86W25 1043 aa16.46■□□□□ 0.23
ATG4B-207ENST00000415107 NSD2O96028 1365 aa16.46■□□□□ 0.23
ATG4B-207ENST00000415107 CARD14Q9BXL6 1004 aa16.45■□□□□ 0.22
ATG4B-207ENST00000415107 ABCC6O95255 1503 aa16.45■□□□□ 0.22
ATG4B-207ENST00000415107 CPDO75976 1380 aa16.44■□□□□ 0.22
ATG4B-207ENST00000415107 PANK3Q9H999 370 aa16.44■□□□□ 0.22
ATG4B-207ENST00000415107 ANKRD26Q9UPS8 1709 aa16.44■□□□□ 0.22
ATG4B-207ENST00000415107 NFAT5O94916 1531 aa16.44■□□□□ 0.22
ATG4B-207ENST00000415107 CGNL1Q0VF96 1302 aa16.44■□□□□ 0.22
ATG4B-207ENST00000415107 NPC1L1Q9UHC9 1359 aa16.43■□□□□ 0.22
ATG4B-207ENST00000415107 PER1O15534 1290 aaPredicted RBP16.42■□□□□ 0.22
ATG4B-207ENST00000415107 NLRP6P59044 892 aa16.42■□□□□ 0.22
ATG4B-207ENST00000415107 POLR3GLQ9BT43 218 aa16.42■□□□□ 0.22
ATG4B-207ENST00000415107 FYB1O15117 783 aa16.41■□□□□ 0.22
ATG4B-207ENST00000415107 LMOD2Q6P5Q4 547 aa16.41■□□□□ 0.22
ATG4B-207ENST00000415107 NME9Q86XW9 330 aa16.41■□□□□ 0.22
ATG4B-207ENST00000415107 KCNH5Q8NCM2 988 aa16.41■□□□□ 0.22
ATG4B-207ENST00000415107 COL14A1Q05707 1796 aaKnown RBP16.41■□□□□ 0.22
ATG4B-207ENST00000415107 NWD2Q9ULI1 1742 aa16.4■□□□□ 0.22
ATG4B-207ENST00000415107 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.4■□□□□ 0.22
ATG4B-207ENST00000415107 SLIT2O94813 1529 aa16.4■□□□□ 0.22
ATG4B-207ENST00000415107 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.39■□□□□ 0.21
ATG4B-207ENST00000415107 GCP02774 474 aa16.39■□□□□ 0.21
ATG4B-207ENST00000415107 LMO7Q8WWI1 1683 aa16.39■□□□□ 0.21
ATG4B-207ENST00000415107 AMER1Q5JTC6 1135 aaPredicted RBP16.37■□□□□ 0.21
ATG4B-207ENST00000415107 FNBP4Q8N3X1 1017 aaPredicted RBP16.37■□□□□ 0.21
ATG4B-207ENST00000415107 CABLES1Q8TDN4 633 aa16.37■□□□□ 0.21
ATG4B-207ENST00000415107 COG3Q96JB2 828 aa16.37■□□□□ 0.21
ATG4B-207ENST00000415107 KNSTRNQ9Y448 316 aa16.37■□□□□ 0.21
ATG4B-207ENST00000415107 AATKQ6ZMQ8 1374 aa16.37■□□□□ 0.21
ATG4B-207ENST00000415107 PLCH1Q4KWH8 1693 aa16.37■□□□□ 0.21
ATG4B-207ENST00000415107 NUTM2GQ5VZR2 741 aa16.36■□□□□ 0.21
ATG4B-207ENST00000415107 KIF24Q5T7B8 1368 aa16.36■□□□□ 0.21
ATG4B-207ENST00000415107 ZNF316A6NFI3 1004 aaPredicted RBP16.35■□□□□ 0.21
ATG4B-207ENST00000415107 NRAPQ86VF7 1730 aa16.35■□□□□ 0.21
ATG4B-207ENST00000415107 COL18A1P39060 1754 aa16.35■□□□□ 0.21
ATG4B-207ENST00000415107 KIAA0232Q92628 1395 aa16.35■□□□□ 0.21
ATG4B-207ENST00000415107 NUTM2BA6NNL0 878 aaPredicted RBP16.34■□□□□ 0.21
ATG4B-207ENST00000415107 NUTM2EB1AL46 878 aaPredicted RBP16.34■□□□□ 0.21
ATG4B-207ENST00000415107 HAP1P54257 671 aaPredicted RBP16.34■□□□□ 0.21
ATG4B-207ENST00000415107 ARHGEF25Q86VW2 580 aa16.34■□□□□ 0.21
ATG4B-207ENST00000415107 NUTM2AQ8IVF1 878 aaPredicted RBP16.34■□□□□ 0.21
ATG4B-207ENST00000415107 ZRANB1Q9UGI0 708 aa16.34■□□□□ 0.21
ATG4B-207ENST00000415107 GGNBP2Q9H3C7 697 aa16.33■□□□□ 0.2
ATG4B-207ENST00000415107 RTL1A6NKG5 1358 aa16.33■□□□□ 0.2
ATG4B-207ENST00000415107 SMG6Q86US8 1419 aaKnown RBP16.33■□□□□ 0.2
ATG4B-207ENST00000415107 BCL9LQ86UU0 1499 aa16.33■□□□□ 0.2
ATG4B-207ENST00000415107 LTN1O94822 1766 aa16.33■□□□□ 0.2
ATG4B-207ENST00000415107 ADAMTS2O95450 1211 aa16.32■□□□□ 0.2
ATG4B-207ENST00000415107 MEX3CQ5U5Q3 659 aaKnown RBP16.32■□□□□ 0.2
ATG4B-207ENST00000415107 PRDM11Q9NQV5 511 aa16.32■□□□□ 0.2
ATG4B-207ENST00000415107 BLMP54132 1417 aaPredicted RBP16.3■□□□□ 0.2
ATG4B-207ENST00000415107 FAM83GA6ND36 823 aa16.3■□□□□ 0.2
ATG4B-207ENST00000415107 ZNF772Q68DY9 489 aaPredicted RBP16.3■□□□□ 0.2
ATG4B-207ENST00000415107 C8orf37Q96NL8 207 aa16.3■□□□□ 0.2
ATG4B-207ENST00000415107 CAMTA1Q9Y6Y1 1673 aa16.3■□□□□ 0.2
ATG4B-207ENST00000415107 COL5A2P05997 1499 aaPredicted RBP16.29■□□□□ 0.2
ATG4B-207ENST00000415107 AFF2P51816 1311 aa16.29■□□□□ 0.2
ATG4B-207ENST00000415107 ATRNO75882 1429 aa16.28■□□□□ 0.2
ATG4B-207ENST00000415107 ZC3H6P61129 1189 aaKnown RBP16.28■□□□□ 0.2
ATG4B-207ENST00000415107 NGLY1Q96IV0 654 aa16.28■□□□□ 0.2
ATG4B-207ENST00000415107 UNC5CLQ8IV45 518 aa16.27■□□□□ 0.2
ATG4B-207ENST00000415107 RGS17Q9UGC6 210 aaPredicted RBP16.27■□□□□ 0.2
ATG4B-207ENST00000415107 FAM208AQ9UK61 1670 aaKnown RBP16.27■□□□□ 0.19
ATG4B-207ENST00000415107 FLT4P35916 1363 aa16.26■□□□□ 0.19
ATG4B-207ENST00000415107 MAP3K19Q56UN5 1328 aa16.26■□□□□ 0.19
ATG4B-207ENST00000415107 PEAK1Q9H792 1746 aa16.26■□□□□ 0.19
ATG4B-207ENST00000415107 USP21Q9UK80 565 aa16.26■□□□□ 0.19
ATG4B-207ENST00000415107 IP6K1Q92551 441 aa16.25■□□□□ 0.19
ATG4B-207ENST00000415107 BTG4Q9NY30 223 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms