RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 CDK19Q9BWU1 502 aa22.48■■□□□ 1.19
ACTB-202ENST00000414620 PHRF1Q9P1Y6 1649 aaKnown RBP22.48■■□□□ 1.19
ACTB-202ENST00000414620 CCDC9Q9Y3X0 531 aaKnown RBP22.45■■□□□ 1.18
ACTB-202ENST00000414620 L3MBTL2Q969R5 705 aa22.44■■□□□ 1.18
ACTB-202ENST00000414620 FAM83GA6ND36 823 aa22.43■■□□□ 1.18
ACTB-202ENST00000414620 NEUROD1Q13562 356 aa22.43■■□□□ 1.18
ACTB-202ENST00000414620 VPS72Q15906 364 aa22.42■■□□□ 1.18
ACTB-202ENST00000414620 CENPJQ9HC77 1338 aaPredicted RBP22.41■■□□□ 1.18
ACTB-202ENST00000414620 ACEP12821 1306 aa22.39■■□□□ 1.18
ACTB-202ENST00000414620 NUTM2GQ5VZR2 741 aa22.39■■□□□ 1.17
ACTB-202ENST00000414620 BTG4Q9NY30 223 aa22.39■■□□□ 1.17
ACTB-202ENST00000414620 POLR3AO14802 1390 aaPredicted RBP22.38■■□□□ 1.17
ACTB-202ENST00000414620 SRPK2P78362 688 aaKnown RBP22.38■■□□□ 1.17
ACTB-202ENST00000414620 CCDC61Q9Y6R9 512 aa22.38■■□□□ 1.17
ACTB-202ENST00000414620 PPIP5K1Q6PFW1 1433 aa22.38■■□□□ 1.17
ACTB-202ENST00000414620 SEPT12Q8IYM1 358 aa22.37■■□□□ 1.17
ACTB-202ENST00000414620 CABP2Q9NPB3 220 aa22.37■■□□□ 1.17
ACTB-202ENST00000414620 NRKQ7Z2Y5 1582 aa22.36■■□□□ 1.17
ACTB-202ENST00000414620 A0A0G2JS52 829 aa22.35■■□□□ 1.17
ACTB-202ENST00000414620 MYT1Q01538 1121 aa22.35■■□□□ 1.17
ACTB-202ENST00000414620 NBPF8Q3BBV2 869 aa22.35■■□□□ 1.17
ACTB-202ENST00000414620 PRDM11Q9NQV5 511 aa22.34■■□□□ 1.17
ACTB-202ENST00000414620 PLEKHG3A1L390 1219 aa22.33■■□□□ 1.17
ACTB-202ENST00000414620 ROCK2O75116 1388 aaKnown RBP22.33■■□□□ 1.17
ACTB-202ENST00000414620 KIAA0232Q92628 1395 aa22.33■■□□□ 1.17
ACTB-202ENST00000414620 EP400Q96L91 3159 aa22.32■■□□□ 1.16
ACTB-202ENST00000414620 CHRNA2Q15822 529 aa22.31■■□□□ 1.16
ACTB-202ENST00000414620 FAM98CQ17RN3 349 aaKnown RBP22.31■■□□□ 1.16
ACTB-202ENST00000414620 ZC3H6P61129 1189 aaKnown RBP22.3■■□□□ 1.16
ACTB-202ENST00000414620 ABTB2Q8N961 1025 aa22.29■■□□□ 1.16
ACTB-202ENST00000414620 AKAP12Q02952 1782 aa22.29■■□□□ 1.16
ACTB-202ENST00000414620 BLMP54132 1417 aaPredicted RBP22.29■■□□□ 1.16
ACTB-202ENST00000414620 THSD7AQ9UPZ6 1657 aa22.29■■□□□ 1.16
ACTB-202ENST00000414620 ONECUT3O60422 494 aaPredicted RBP22.28■■□□□ 1.16
ACTB-202ENST00000414620 KRT27Q7Z3Y8 459 aa22.28■■□□□ 1.16
ACTB-202ENST00000414620 CCDC125Q86Z20 511 aa22.27■■□□□ 1.16
ACTB-202ENST00000414620 STRN4Q9NRL3 753 aa22.27■■□□□ 1.16
ACTB-202ENST00000414620 SPATA31A5Q5VU36 1347 aa22.27■■□□□ 1.16
ACTB-202ENST00000414620 SPATA31A7Q8IWB4 1347 aa22.27■■□□□ 1.16
ACTB-202ENST00000414620 LMO7Q8WWI1 1683 aa22.26■■□□□ 1.15
ACTB-202ENST00000414620 PIK3C2AO00443 1686 aa22.26■■□□□ 1.15
ACTB-202ENST00000414620 CABP1Q9NZU7 370 aa22.25■■□□□ 1.15
ACTB-202ENST00000414620 EVC2Q86UK5 1308 aa22.25■■□□□ 1.15
ACTB-202ENST00000414620 USP6P35125 1406 aa22.24■■□□□ 1.15
ACTB-202ENST00000414620 RGPD1P0DJD0 1748 aa22.23■■□□□ 1.15
ACTB-202ENST00000414620 DEFB132Q7Z7B7 95 aa22.23■■□□□ 1.15
ACTB-202ENST00000414620 USP19O94966 1318 aa22.23■■□□□ 1.15
ACTB-202ENST00000414620 CAMTA1Q9Y6Y1 1673 aa22.23■■□□□ 1.15
ACTB-202ENST00000414620 SF3B2Q13435 895 aaKnown RBP22.21■■□□□ 1.15
ACTB-202ENST00000414620 FAM182BQ5T319 152 aa22.21■■□□□ 1.15
ACTB-202ENST00000414620 TONSLQ96HA7 1378 aa22.21■■□□□ 1.15
ACTB-202ENST00000414620 SSH2Q76I76 1423 aa22.21■■□□□ 1.15
ACTB-202ENST00000414620 NLRP13Q86W25 1043 aa22.2■■□□□ 1.14
ACTB-202ENST00000414620 SPATA31A1Q5TZJ5 1347 aa22.2■■□□□ 1.14
ACTB-202ENST00000414620 TNS1Q9HBL0 1735 aaKnown RBP22.2■■□□□ 1.14
ACTB-202ENST00000414620 ZBTB7CA1YPR0 619 aa22.19■■□□□ 1.14
ACTB-202ENST00000414620 USP35Q9P2H5 1018 aa22.19■■□□□ 1.14
ACTB-202ENST00000414620 ZRANB1Q9UGI0 708 aa22.19■■□□□ 1.14
ACTB-202ENST00000414620 SLIT3O75094 1523 aa22.19■■□□□ 1.14
ACTB-202ENST00000414620 MON2Q7Z3U7 1717 aa22.19■■□□□ 1.14
ACTB-202ENST00000414620 RGPD5Q99666 1765 aa22.18■■□□□ 1.14
ACTB-202ENST00000414620 CPDO75976 1380 aa22.18■■□□□ 1.14
ACTB-202ENST00000414620 EVA1CP58658 441 aa22.18■■□□□ 1.14
ACTB-202ENST00000414620 BRD4O60885 1362 aaPredicted RBP22.17■■□□□ 1.14
ACTB-202ENST00000414620 GCP02774 474 aa22.16■■□□□ 1.14
ACTB-202ENST00000414620 NLRP6P59044 892 aa22.16■■□□□ 1.14
ACTB-202ENST00000414620 CARD11Q9BXL7 1154 aa22.16■■□□□ 1.14
ACTB-202ENST00000414620 LARP1Q6PKG0 1096 aaKnown RBP22.15■■□□□ 1.14
ACTB-202ENST00000414620 COL5A2P05997 1499 aaPredicted RBP22.15■■□□□ 1.14
ACTB-202ENST00000414620 COL18A1P39060 1754 aa22.15■■□□□ 1.14
ACTB-202ENST00000414620 WNK3Q9BYP7 1800 aa22.13■■□□□ 1.13
ACTB-202ENST00000414620 TRIM26Q12899 539 aaPredicted RBP22.12■■□□□ 1.13
ACTB-202ENST00000414620 PARP4Q9UKK3 1724 aaKnown RBP22.11■■□□□ 1.13
ACTB-202ENST00000414620 TTC21BQ7Z4L5 1316 aa22.1■■□□□ 1.13
ACTB-202ENST00000414620 BAG6P46379 1132 aa22.1■■□□□ 1.13
ACTB-202ENST00000414620 SBNO2Q9Y2G9 1366 aa22.1■■□□□ 1.13
ACTB-202ENST00000414620 CPSF1Q10570 1443 aaKnown RBP22.09■■□□□ 1.13
ACTB-202ENST00000414620 SOX12O15370 315 aa22.09■■□□□ 1.13
ACTB-202ENST00000414620 KTN1Q86UP2 1357 aaKnown RBP22.09■■□□□ 1.13
ACTB-202ENST00000414620 BARGINQ6ZT62 677 aa22.07■■□□□ 1.12
ACTB-202ENST00000414620 TCP11L2Q8N4U5 519 aa22.07■■□□□ 1.12
ACTB-202ENST00000414620 ZNF692Q9BU19 519 aaPredicted RBP22.07■■□□□ 1.12
ACTB-202ENST00000414620 LRRC37A3O60309 1634 aa22.06■■□□□ 1.12
ACTB-202ENST00000414620 EN1Q05925 392 aaPredicted RBP22.06■■□□□ 1.12
ACTB-202ENST00000414620 AATKQ6ZMQ8 1374 aa22.06■■□□□ 1.12
ACTB-202ENST00000414620 LTN1O94822 1766 aa22.06■■□□□ 1.12
ACTB-202ENST00000414620 CRB1P82279 1406 aa22.06■■□□□ 1.12
ACTB-202ENST00000414620 TTC21AQ8NDW8 1320 aa22.06■■□□□ 1.12
ACTB-202ENST00000414620 USP54Q70EL1 1684 aa22.05■■□□□ 1.12
ACTB-202ENST00000414620 CD163L1Q9NR16 1453 aa22.05■■□□□ 1.12
ACTB-202ENST00000414620 NFAT5O94916 1531 aa22.05■■□□□ 1.12
ACTB-202ENST00000414620 TRIM37O94972 964 aa22.04■■□□□ 1.12
ACTB-202ENST00000414620 PDE3BQ13370 1112 aa22.04■■□□□ 1.12
ACTB-202ENST00000414620 TMC1Q8TDI8 760 aa22.04■■□□□ 1.12
ACTB-202ENST00000414620 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.03■■□□□ 1.12
ACTB-202ENST00000414620 SBF2Q86WG5 1849 aa22.02■■□□□ 1.12
ACTB-202ENST00000414620 FAM196AQ6ZSG2 479 aa22.02■■□□□ 1.12
ACTB-202ENST00000414620 THRAP3Q9Y2W1 955 aaKnown RBP22.02■■□□□ 1.12
ACTB-202ENST00000414620 PSDA5PKW4 1024 aaPredicted RBP22.01■■□□□ 1.11
ACTB-202ENST00000414620 TOM1L2Q6ZVM7 507 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms