RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 PER1O15534 1290 aaPredicted RBP13.62□□□□□ -0.23
DDB1-202ENST00000414411 TOM1O60784 492 aa13.62□□□□□ -0.23
DDB1-202ENST00000414411 BRINP3Q76B58 766 aa13.62□□□□□ -0.23
DDB1-202ENST00000414411 ZNF692Q9BU19 519 aaPredicted RBP13.62□□□□□ -0.23
DDB1-202ENST00000414411 TERF2IPQ9NYB0 399 aa13.62□□□□□ -0.23
DDB1-202ENST00000414411 A0A1W2PP64 1363 aa13.61□□□□□ -0.23
DDB1-202ENST00000414411 FOXO3O43524 673 aa13.6□□□□□ -0.23
DDB1-202ENST00000414411 NGDNQ8NEJ9 315 aaKnown RBP13.6□□□□□ -0.23
DDB1-202ENST00000414411 AKAP12Q02952 1782 aa13.6□□□□□ -0.23
DDB1-202ENST00000414411 KIF1AQ12756 1690 aa13.59□□□□□ -0.23
DDB1-202ENST00000414411 ERICH6Q7L0X2 663 aa13.59□□□□□ -0.23
DDB1-202ENST00000414411 HDGFL2Q7Z4V5 671 aaPredicted RBP13.59□□□□□ -0.23
DDB1-202ENST00000414411 UBAP1LF5GYI3 381 aa13.58□□□□□ -0.23
DDB1-202ENST00000414411 SSH2Q76I76 1423 aa13.58□□□□□ -0.24
DDB1-202ENST00000414411 KTN1Q86UP2 1357 aaKnown RBP13.58□□□□□ -0.24
DDB1-202ENST00000414411 DCAF8L1A6NGE4 600 aa13.57□□□□□ -0.24
DDB1-202ENST00000414411 USP6P35125 1406 aa13.57□□□□□ -0.24
DDB1-202ENST00000414411 MON2Q7Z3U7 1717 aa13.57□□□□□ -0.24
DDB1-202ENST00000414411 ROBO1Q9Y6N7 1651 aa13.56□□□□□ -0.24
DDB1-202ENST00000414411 PSME1Q06323 249 aa13.56□□□□□ -0.24
DDB1-202ENST00000414411 DDX17Q92841 729 aaKnown RBP13.56□□□□□ -0.24
DDB1-202ENST00000414411 NPHP3Q7Z494 1330 aa13.56□□□□□ -0.24
DDB1-202ENST00000414411 BRD4O60885 1362 aaPredicted RBP13.55□□□□□ -0.24
DDB1-202ENST00000414411 EDC4Q6P2E9 1401 aaKnown RBP13.55□□□□□ -0.24
DDB1-202ENST00000414411 KRT28Q7Z3Y7 464 aa13.55□□□□□ -0.24
DDB1-202ENST00000414411 NSD3Q9BZ95 1437 aa13.55□□□□□ -0.24
DDB1-202ENST00000414411 KNSTRNQ9Y448 316 aa13.54□□□□□ -0.24
DDB1-202ENST00000414411 SOS2Q07890 1332 aaPredicted RBP13.54□□□□□ -0.24
DDB1-202ENST00000414411 TTC21BQ7Z4L5 1316 aa13.54□□□□□ -0.24
DDB1-202ENST00000414411 NHSL1Q5SYE7 1610 aa13.54□□□□□ -0.24
DDB1-202ENST00000414411 PXDNQ92626 1479 aa13.53□□□□□ -0.24
DDB1-202ENST00000414411 NRKQ7Z2Y5 1582 aa13.53□□□□□ -0.24
DDB1-202ENST00000414411 PIP4K2BP78356 416 aa13.53□□□□□ -0.24
DDB1-202ENST00000414411 XPCQ01831 940 aaPredicted RBP13.53□□□□□ -0.24
DDB1-202ENST00000414411 TAOK2Q9UL54 1235 aa13.53□□□□□ -0.24
DDB1-202ENST00000414411 FYB1O15117 783 aa13.52□□□□□ -0.24
DDB1-202ENST00000414411 NPC1L1Q9UHC9 1359 aa13.52□□□□□ -0.24
DDB1-202ENST00000414411 TRPM3Q9HCF6 1732 aaPredicted RBP13.52□□□□□ -0.24
DDB1-202ENST00000414411 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.52□□□□□ -0.25
DDB1-202ENST00000414411 CGNL1Q0VF96 1302 aa13.52□□□□□ -0.25
DDB1-202ENST00000414411 TTC21AQ8NDW8 1320 aa13.52□□□□□ -0.25
DDB1-202ENST00000414411 SBNO1A3KN83 1393 aa13.51□□□□□ -0.25
DDB1-202ENST00000414411 AHDC1Q5TGY3 1603 aaPredicted RBP13.51□□□□□ -0.25
DDB1-202ENST00000414411 SUPT16HQ9Y5B9 1047 aaKnown RBP13.51□□□□□ -0.25
DDB1-202ENST00000414411 NME9Q86XW9 330 aa13.5□□□□□ -0.25
DDB1-202ENST00000414411 SPATA31A3Q5VYP0 1347 aa13.49□□□□□ -0.25
DDB1-202ENST00000414411 PAK3O75914 559 aaPredicted RBP13.49□□□□□ -0.25
DDB1-202ENST00000414411 ATXN8OSP0DMR3 200 aa13.49□□□□□ -0.25
DDB1-202ENST00000414411 USP31Q70CQ4 1352 aa13.49□□□□□ -0.25
DDB1-202ENST00000414411 ZRANB1Q9UGI0 708 aa13.49□□□□□ -0.25
DDB1-202ENST00000414411 ALS2Q96Q42 1657 aa13.48□□□□□ -0.25
DDB1-202ENST00000414411 NSD2O96028 1365 aa13.48□□□□□ -0.25
DDB1-202ENST00000414411 ABTB2Q8N961 1025 aa13.48□□□□□ -0.25
DDB1-202ENST00000414411 GGNBP2Q9H3C7 697 aa13.48□□□□□ -0.25
DDB1-202ENST00000414411 PIK3C2AO00443 1686 aa13.48□□□□□ -0.25
DDB1-202ENST00000414411 KIF20BQ96Q89 1820 aa13.47□□□□□ -0.25
DDB1-202ENST00000414411 TULP1O00294 542 aaPredicted RBP13.47□□□□□ -0.25
DDB1-202ENST00000414411 CC2D1BQ5T0F9 858 aaKnown RBP13.47□□□□□ -0.25
DDB1-202ENST00000414411 LRRC59Q96AG4 307 aaKnown RBP13.47□□□□□ -0.25
DDB1-202ENST00000414411 TNS3Q68CZ2 1445 aa13.46□□□□□ -0.25
DDB1-202ENST00000414411 COL16A1Q07092 1604 aaPredicted RBP13.46□□□□□ -0.25
DDB1-202ENST00000414411 NLRP6P59044 892 aa13.46□□□□□ -0.25
DDB1-202ENST00000414411 PHLPP1O60346 1717 aa13.46□□□□□ -0.26
DDB1-202ENST00000414411 OVOS2A0A0J9YW53 1432 aa13.45□□□□□ -0.26
DDB1-202ENST00000414411 OVOS2Q6IE36 1432 aa13.45□□□□□ -0.26
DDB1-202ENST00000414411 PRKRIP1Q9H875 184 aaPredicted RBP13.45□□□□□ -0.26
DDB1-202ENST00000414411 USP54Q70EL1 1684 aa13.45□□□□□ -0.26
DDB1-202ENST00000414411 MARF1Q9Y4F3 1742 aaKnown RBP13.45□□□□□ -0.26
DDB1-202ENST00000414411 NUTM2GQ5VZR2 741 aa13.45□□□□□ -0.26
DDB1-202ENST00000414411 NLRP13Q86W25 1043 aa13.45□□□□□ -0.26
DDB1-202ENST00000414411 ARHGEF10O15013 1369 aa13.44□□□□□ -0.26
DDB1-202ENST00000414411 PARD3Q8TEW0 1356 aa13.44□□□□□ -0.26
DDB1-202ENST00000414411 ANKRD26Q9UPS8 1709 aa13.44□□□□□ -0.26
DDB1-202ENST00000414411 COG3Q96JB2 828 aa13.44□□□□□ -0.26
DDB1-202ENST00000414411 RALBP1Q15311 655 aa13.43□□□□□ -0.26
DDB1-202ENST00000414411 LMOD2Q6P5Q4 547 aa13.43□□□□□ -0.26
DDB1-202ENST00000414411 USP19O94966 1318 aa13.43□□□□□ -0.26
DDB1-202ENST00000414411 MORC1Q86VD1 984 aa13.43□□□□□ -0.26
DDB1-202ENST00000414411 HSPA1LP34931 641 aa13.42□□□□□ -0.26
DDB1-202ENST00000414411 CNGB1Q14028 1251 aaPredicted RBP13.42□□□□□ -0.26
DDB1-202ENST00000414411 FBXO41Q8TF61 875 aa13.41□□□□□ -0.26
DDB1-202ENST00000414411 MED1Q15648 1581 aaPredicted RBP13.41□□□□□ -0.26
DDB1-202ENST00000414411 ATF5Q9Y2D1 282 aaPredicted RBP13.41□□□□□ -0.26
DDB1-202ENST00000414411 PNPLA6Q8IY17 1366 aa13.4□□□□□ -0.26
DDB1-202ENST00000414411 GCP02774 474 aa13.4□□□□□ -0.26
DDB1-202ENST00000414411 FBLN1P23142 703 aa13.4□□□□□ -0.26
DDB1-202ENST00000414411 SLIT3O75094 1523 aa13.4□□□□□ -0.27
DDB1-202ENST00000414411 AATKQ6ZMQ8 1374 aa13.4□□□□□ -0.27
DDB1-202ENST00000414411 CRYBG1Q9Y4K1 1723 aa13.39□□□□□ -0.27
DDB1-202ENST00000414411 CABLES1Q8TDN4 633 aa13.39□□□□□ -0.27
DDB1-202ENST00000414411 COL22A1Q8NFW1 1626 aaPredicted RBP13.39□□□□□ -0.27
DDB1-202ENST00000414411 TNNT2P45379 298 aaPredicted RBP13.39□□□□□ -0.27
DDB1-202ENST00000414411 HOMEZQ8IX15 550 aa13.39□□□□□ -0.27
DDB1-202ENST00000414411 KCNH5Q8NCM2 988 aa13.39□□□□□ -0.27
DDB1-202ENST00000414411 MAP2P11137 1827 aaKnown RBP13.38□□□□□ -0.27
DDB1-202ENST00000414411 PPP2R1AP30153 589 aa13.38□□□□□ -0.27
DDB1-202ENST00000414411 NFAT5O94916 1531 aa13.38□□□□□ -0.27
DDB1-202ENST00000414411 POLKQ9UBT6 870 aa13.37□□□□□ -0.27
DDB1-202ENST00000414411 JCADQ9P266 1359 aa13.37□□□□□ -0.27
DDB1-202ENST00000414411 SHPRHQ149N8 1683 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms