RNA–Protein interactions for RNA: ENST00000414331.5

PTPA-209, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 681 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-209ENST00000414331 VPS72Q15906 364 aa22.66■■□□□ 1.22
PTPA-209ENST00000414331 CCDC9Q9Y3X0 531 aaKnown RBP22.66■■□□□ 1.22
PTPA-209ENST00000414331 PHRF1Q9P1Y6 1649 aaKnown RBP22.66■■□□□ 1.22
PTPA-209ENST00000414331 BRWD3Q6RI45 1802 aa22.66■■□□□ 1.22
PTPA-209ENST00000414331 L3MBTL2Q969R5 705 aa22.64■■□□□ 1.21
PTPA-209ENST00000414331 POLR3AO14802 1390 aaPredicted RBP22.63■■□□□ 1.21
PTPA-209ENST00000414331 FAM83GA6ND36 823 aa22.63■■□□□ 1.21
PTPA-209ENST00000414331 CCDC61Q9Y6R9 512 aa22.63■■□□□ 1.21
PTPA-209ENST00000414331 SRPK2P78362 688 aaKnown RBP22.61■■□□□ 1.21
PTPA-209ENST00000414331 NEUROD1Q13562 356 aa22.61■■□□□ 1.21
PTPA-209ENST00000414331 SIN3AQ96ST3 1273 aa22.61■■□□□ 1.21
PTPA-209ENST00000414331 ACEP12821 1306 aa22.6■■□□□ 1.21
PTPA-209ENST00000414331 BTG4Q9NY30 223 aa22.6■■□□□ 1.21
PTPA-209ENST00000414331 PPIP5K1Q6PFW1 1433 aa22.59■■□□□ 1.21
PTPA-209ENST00000414331 EP400Q96L91 3159 aa22.59■■□□□ 1.21
PTPA-209ENST00000414331 PLEKHG3A1L390 1219 aa22.58■■□□□ 1.21
PTPA-209ENST00000414331 CCDC125Q86Z20 511 aa22.58■■□□□ 1.21
PTPA-209ENST00000414331 SEPT12Q8IYM1 358 aa22.58■■□□□ 1.21
PTPA-209ENST00000414331 PRDM11Q9NQV5 511 aa22.58■■□□□ 1.21
PTPA-209ENST00000414331 ROCK2O75116 1388 aaKnown RBP22.58■■□□□ 1.21
PTPA-209ENST00000414331 A0A0G2JS52 829 aa22.57■■□□□ 1.2
PTPA-209ENST00000414331 MYT1Q01538 1121 aa22.57■■□□□ 1.2
PTPA-209ENST00000414331 NBPF8Q3BBV2 869 aa22.57■■□□□ 1.2
PTPA-209ENST00000414331 NRKQ7Z2Y5 1582 aa22.56■■□□□ 1.2
PTPA-209ENST00000414331 KIAA0232Q92628 1395 aa22.54■■□□□ 1.2
PTPA-209ENST00000414331 CABP2Q9NPB3 220 aa22.54■■□□□ 1.2
PTPA-209ENST00000414331 BLMP54132 1417 aaPredicted RBP22.54■■□□□ 1.2
PTPA-209ENST00000414331 NUTM2GQ5VZR2 741 aa22.53■■□□□ 1.2
PTPA-209ENST00000414331 ONECUT3O60422 494 aaPredicted RBP22.52■■□□□ 1.2
PTPA-209ENST00000414331 EVC2Q86UK5 1308 aa22.52■■□□□ 1.2
PTPA-209ENST00000414331 BRD4O60885 1362 aaPredicted RBP22.51■■□□□ 1.19
PTPA-209ENST00000414331 FAM98CQ17RN3 349 aaKnown RBP22.51■■□□□ 1.19
PTPA-209ENST00000414331 KRT27Q7Z3Y8 459 aa22.51■■□□□ 1.19
PTPA-209ENST00000414331 ABTB2Q8N961 1025 aa22.51■■□□□ 1.19
PTPA-209ENST00000414331 SPATA31A5Q5VU36 1347 aa22.5■■□□□ 1.19
PTPA-209ENST00000414331 SPATA31A7Q8IWB4 1347 aa22.5■■□□□ 1.19
PTPA-209ENST00000414331 THSD7AQ9UPZ6 1657 aa22.49■■□□□ 1.19
PTPA-209ENST00000414331 ZC3H6P61129 1189 aaKnown RBP22.49■■□□□ 1.19
PTPA-209ENST00000414331 SF3B2Q13435 895 aaKnown RBP22.49■■□□□ 1.19
PTPA-209ENST00000414331 CHRNA2Q15822 529 aa22.48■■□□□ 1.19
PTPA-209ENST00000414331 USP19O94966 1318 aa22.48■■□□□ 1.19
PTPA-209ENST00000414331 USP6P35125 1406 aa22.48■■□□□ 1.19
PTPA-209ENST00000414331 NLRP13Q86W25 1043 aa22.46■■□□□ 1.19
PTPA-209ENST00000414331 STRN4Q9NRL3 753 aa22.46■■□□□ 1.19
PTPA-209ENST00000414331 CABP1Q9NZU7 370 aa22.46■■□□□ 1.19
PTPA-209ENST00000414331 TONSLQ96HA7 1378 aa22.46■■□□□ 1.19
PTPA-209ENST00000414331 LMO7Q8WWI1 1683 aa22.46■■□□□ 1.19
PTPA-209ENST00000414331 ZRANB1Q9UGI0 708 aa22.45■■□□□ 1.18
PTPA-209ENST00000414331 CPDO75976 1380 aa22.45■■□□□ 1.18
PTPA-209ENST00000414331 AKAP12Q02952 1782 aa22.45■■□□□ 1.18
PTPA-209ENST00000414331 RGPD1P0DJD0 1748 aa22.43■■□□□ 1.18
PTPA-209ENST00000414331 PIK3C2AO00443 1686 aa22.43■■□□□ 1.18
PTPA-209ENST00000414331 SPATA31A1Q5TZJ5 1347 aa22.43■■□□□ 1.18
PTPA-209ENST00000414331 SSH2Q76I76 1423 aa22.42■■□□□ 1.18
PTPA-209ENST00000414331 SLIT3O75094 1523 aa22.41■■□□□ 1.18
PTPA-209ENST00000414331 EVA1CP58658 441 aa22.41■■□□□ 1.18
PTPA-209ENST00000414331 CAMTA1Q9Y6Y1 1673 aa22.41■■□□□ 1.18
PTPA-209ENST00000414331 CARD11Q9BXL7 1154 aa22.4■■□□□ 1.18
PTPA-209ENST00000414331 SBNO2Q9Y2G9 1366 aa22.39■■□□□ 1.18
PTPA-209ENST00000414331 GCP02774 474 aa22.39■■□□□ 1.17
PTPA-209ENST00000414331 DEFB132Q7Z7B7 95 aa22.39■■□□□ 1.17
PTPA-209ENST00000414331 NLRP6P59044 892 aa22.38■■□□□ 1.17
PTPA-209ENST00000414331 MON2Q7Z3U7 1717 aa22.37■■□□□ 1.17
PTPA-209ENST00000414331 TRIM26Q12899 539 aaPredicted RBP22.37■■□□□ 1.17
PTPA-209ENST00000414331 ZBTB7CA1YPR0 619 aa22.36■■□□□ 1.17
PTPA-209ENST00000414331 BAG6P46379 1132 aa22.36■■□□□ 1.17
PTPA-209ENST00000414331 ZNF692Q9BU19 519 aaPredicted RBP22.36■■□□□ 1.17
PTPA-209ENST00000414331 USP35Q9P2H5 1018 aa22.36■■□□□ 1.17
PTPA-209ENST00000414331 COL5A2P05997 1499 aaPredicted RBP22.35■■□□□ 1.17
PTPA-209ENST00000414331 TNS1Q9HBL0 1735 aaKnown RBP22.35■■□□□ 1.17
PTPA-209ENST00000414331 LARP1Q6PKG0 1096 aaKnown RBP22.33■■□□□ 1.17
PTPA-209ENST00000414331 BARGINQ6ZT62 677 aa22.33■■□□□ 1.17
PTPA-209ENST00000414331 KTN1Q86UP2 1357 aaKnown RBP22.33■■□□□ 1.17
PTPA-209ENST00000414331 TTC21BQ7Z4L5 1316 aa22.32■■□□□ 1.16
PTPA-209ENST00000414331 TTC21AQ8NDW8 1320 aa22.32■■□□□ 1.16
PTPA-209ENST00000414331 FAM182BQ5T319 152 aa22.32■■□□□ 1.16
PTPA-209ENST00000414331 TCP11L2Q8N4U5 519 aa22.32■■□□□ 1.16
PTPA-209ENST00000414331 CPSF1Q10570 1443 aaKnown RBP22.31■■□□□ 1.16
PTPA-209ENST00000414331 PARP4Q9UKK3 1724 aaKnown RBP22.31■■□□□ 1.16
PTPA-209ENST00000414331 AATKQ6ZMQ8 1374 aa22.31■■□□□ 1.16
PTPA-209ENST00000414331 CRB1P82279 1406 aa22.31■■□□□ 1.16
PTPA-209ENST00000414331 THRAP3Q9Y2W1 955 aaKnown RBP22.3■■□□□ 1.16
PTPA-209ENST00000414331 COL18A1P39060 1754 aa22.3■■□□□ 1.16
PTPA-209ENST00000414331 KCNH5Q8NCM2 988 aa22.29■■□□□ 1.16
PTPA-209ENST00000414331 WNK3Q9BYP7 1800 aa22.29■■□□□ 1.16
PTPA-209ENST00000414331 PDE3BQ13370 1112 aa22.28■■□□□ 1.16
PTPA-209ENST00000414331 FAM196AQ6ZSG2 479 aa22.28■■□□□ 1.16
PTPA-209ENST00000414331 USP54Q70EL1 1684 aa22.27■■□□□ 1.16
PTPA-209ENST00000414331 DISP2A7MBM2 1401 aa22.27■■□□□ 1.16
PTPA-209ENST00000414331 RGPD5Q99666 1765 aa22.26■■□□□ 1.15
PTPA-209ENST00000414331 NFAT5O94916 1531 aa22.26■■□□□ 1.15
PTPA-209ENST00000414331 SOX12O15370 315 aa22.25■■□□□ 1.15
PTPA-209ENST00000414331 TMC1Q8TDI8 760 aa22.25■■□□□ 1.15
PTPA-209ENST00000414331 LRRC37A3O60309 1634 aa22.24■■□□□ 1.15
PTPA-209ENST00000414331 HDGFL2Q7Z4V5 671 aaPredicted RBP22.24■■□□□ 1.15
PTPA-209ENST00000414331 ABCC6O95255 1503 aa22.24■■□□□ 1.15
PTPA-209ENST00000414331 CD163L1Q9NR16 1453 aa22.23■■□□□ 1.15
PTPA-209ENST00000414331 EN1Q05925 392 aaPredicted RBP22.23■■□□□ 1.15
PTPA-209ENST00000414331 TOM1L2Q6ZVM7 507 aa22.23■■□□□ 1.15
PTPA-209ENST00000414331 TRIM37O94972 964 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms