RNA–Protein interactions for RNA: ENST00000413911.1

AC005540.1-201, humanhuman

TSL 3 BASIC

Gene AC005540.1, Length 919 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005540.1-201ENST00000413911 ATP7BP35670 1465 aa35.64■■■■□ 3.3
AC005540.1-201ENST00000413911 CRYBG1Q9Y4K1 1723 aa35.63■■■■□ 3.29
AC005540.1-201ENST00000413911 KRT27Q7Z3Y8 459 aa35.62■■■■□ 3.29
AC005540.1-201ENST00000413911 NUDT16Q96DE0 195 aaKnown RBP35.61■■■■□ 3.29
AC005540.1-201ENST00000413911 COL14A1Q05707 1796 aaKnown RBP35.61■■■■□ 3.29
AC005540.1-201ENST00000413911 PAK3O75914 559 aaPredicted RBP35.6■■■■□ 3.29
AC005540.1-201ENST00000413911 FAM98CQ17RN3 349 aaKnown RBP35.59■■■■□ 3.29
AC005540.1-201ENST00000413911 CDK19Q9BWU1 502 aa35.56■■■■□ 3.28
AC005540.1-201ENST00000413911 ITSN1Q15811 1721 aa35.54■■■■□ 3.28
AC005540.1-201ENST00000413911 A0A0G2JS52 829 aa35.52■■■■□ 3.28
AC005540.1-201ENST00000413911 MYT1Q01538 1121 aa35.52■■■■□ 3.28
AC005540.1-201ENST00000413911 NBPF1Q3BBV0 1214 aa35.52■■■■□ 3.28
AC005540.1-201ENST00000413911 SPATA31A5Q5VU36 1347 aa35.52■■■■□ 3.28
AC005540.1-201ENST00000413911 SPATA31A7Q8IWB4 1347 aa35.52■■■■□ 3.28
AC005540.1-201ENST00000413911 SF3B2Q13435 895 aaKnown RBP35.5■■■■□ 3.27
AC005540.1-201ENST00000413911 PRDM11Q9NQV5 511 aa35.49■■■■□ 3.27
AC005540.1-201ENST00000413911 TOPAZ1Q8N9V7 1692 aa35.49■■■■□ 3.27
AC005540.1-201ENST00000413911 KIAA1210Q9ULL0 1709 aa35.49■■■■□ 3.27
AC005540.1-201ENST00000413911 POLR3AO14802 1390 aaPredicted RBP35.48■■■■□ 3.27
AC005540.1-201ENST00000413911 KIAA0232Q92628 1395 aa35.48■■■■□ 3.27
AC005540.1-201ENST00000413911 NUTM2GQ5VZR2 741 aa35.47■■■■□ 3.27
AC005540.1-201ENST00000413911 FAM182BQ5T319 152 aa35.46■■■■□ 3.27
AC005540.1-201ENST00000413911 ACEP12821 1306 aa35.46■■■■□ 3.27
AC005540.1-201ENST00000413911 CHRNA2Q15822 529 aa35.45■■■■□ 3.27
AC005540.1-201ENST00000413911 NBPF8Q3BBV2 869 aa35.45■■■■□ 3.27
AC005540.1-201ENST00000413911 PHRF1Q9P1Y6 1649 aaKnown RBP35.45■■■■□ 3.27
AC005540.1-201ENST00000413911 CCDC61Q9Y6R9 512 aa35.44■■■■□ 3.26
AC005540.1-201ENST00000413911 THSD7AQ9UPZ6 1657 aa35.43■■■■□ 3.26
AC005540.1-201ENST00000413911 PLEKHG3A1L390 1219 aa35.42■■■■□ 3.26
AC005540.1-201ENST00000413911 ZC3H6P61129 1189 aaKnown RBP35.41■■■■□ 3.26
AC005540.1-201ENST00000413911 SPATA31A1Q5TZJ5 1347 aa35.38■■■■□ 3.25
AC005540.1-201ENST00000413911 STRN4Q9NRL3 753 aa35.36■■■■□ 3.25
AC005540.1-201ENST00000413911 BAG6P46379 1132 aa35.35■■■■□ 3.25
AC005540.1-201ENST00000413911 EN1Q05925 392 aaPredicted RBP35.32■■■■□ 3.24
AC005540.1-201ENST00000413911 NRKQ7Z2Y5 1582 aa35.32■■■■□ 3.24
AC005540.1-201ENST00000413911 ABTB2Q8N961 1025 aa35.31■■■■□ 3.24
AC005540.1-201ENST00000413911 CABP2Q9NPB3 220 aa35.31■■■■□ 3.24
AC005540.1-201ENST00000413911 CENPJQ9HC77 1338 aaPredicted RBP35.31■■■■□ 3.24
AC005540.1-201ENST00000413911 PPIP5K1Q6PFW1 1433 aa35.3■■■■□ 3.24
AC005540.1-201ENST00000413911 RGPD1P0DJD0 1748 aa35.29■■■■□ 3.24
AC005540.1-201ENST00000413911 PSDA5PKW4 1024 aaPredicted RBP35.29■■■■□ 3.24
AC005540.1-201ENST00000413911 SRPK2P78362 688 aaKnown RBP35.29■■■■□ 3.24
AC005540.1-201ENST00000413911 CAMTA1Q9Y6Y1 1673 aa35.29■■■■□ 3.24
AC005540.1-201ENST00000413911 USP19O94966 1318 aa35.29■■■■□ 3.24
AC005540.1-201ENST00000413911 SSH2Q76I76 1423 aa35.27■■■■□ 3.24
AC005540.1-201ENST00000413911 USP35Q9P2H5 1018 aa35.26■■■■□ 3.24
AC005540.1-201ENST00000413911 TNS1Q9HBL0 1735 aaKnown RBP35.26■■■■□ 3.23
AC005540.1-201ENST00000413911 L3MBTL2Q969R5 705 aa35.25■■■■□ 3.23
AC005540.1-201ENST00000413911 CPDO75976 1380 aa35.25■■■■□ 3.23
AC005540.1-201ENST00000413911 LMO7Q8WWI1 1683 aa35.24■■■■□ 3.23
AC005540.1-201ENST00000413911 LARP1Q6PKG0 1096 aaKnown RBP35.24■■■■□ 3.23
AC005540.1-201ENST00000413911 QRICH2Q9H0J4 1663 aa35.24■■■■□ 3.23
AC005540.1-201ENST00000413911 DISP2A7MBM2 1401 aa35.23■■■■□ 3.23
AC005540.1-201ENST00000413911 EVA1CP58658 441 aa35.22■■■■□ 3.23
AC005540.1-201ENST00000413911 GCP02774 474 aa35.2■■■■□ 3.23
AC005540.1-201ENST00000413911 BARGINQ6ZT62 677 aa35.2■■■■□ 3.23
AC005540.1-201ENST00000413911 CABP1Q9NZU7 370 aa35.2■■■■□ 3.23
AC005540.1-201ENST00000413911 LRP5O75197 1615 aa35.2■■■■□ 3.23
AC005540.1-201ENST00000413911 TRIM37O94972 964 aa35.19■■■■□ 3.22
AC005540.1-201ENST00000413911 NLRP13Q86W25 1043 aa35.19■■■■□ 3.22
AC005540.1-201ENST00000413911 SIN3AQ96ST3 1273 aa35.19■■■■□ 3.22
AC005540.1-201ENST00000413911 EZH2Q15910 746 aaKnown RBP35.18■■■■□ 3.22
AC005540.1-201ENST00000413911 FAM196AQ6ZSG2 479 aa35.17■■■■□ 3.22
AC005540.1-201ENST00000413911 USP6P35125 1406 aa35.15■■■■□ 3.22
AC005540.1-201ENST00000413911 TCP11L2Q8N4U5 519 aa35.14■■■■□ 3.22
AC005540.1-201ENST00000413911 CAMKK2Q96RR4 588 aa35.14■■■■□ 3.22
AC005540.1-201ENST00000413911 BRD4O60885 1362 aaPredicted RBP35.13■■■■□ 3.21
AC005540.1-201ENST00000413911 COL5A2P05997 1499 aaPredicted RBP35.12■■■■□ 3.21
AC005540.1-201ENST00000413911 R3HDM1Q15032 1099 aaKnown RBP35.12■■■■□ 3.21
AC005540.1-201ENST00000413911 TRPM1Q7Z4N2 1603 aa35.12■■■■□ 3.21
AC005540.1-201ENST00000413911 PDE3BQ13370 1112 aa35.1■■■■□ 3.21
AC005540.1-201ENST00000413911 NLRP6P59044 892 aa35.09■■■■□ 3.21
AC005540.1-201ENST00000413911 SLIT3O75094 1523 aa35.08■■■■□ 3.21
AC005540.1-201ENST00000413911 APBA3O96018 575 aa35.07■■■■□ 3.2
AC005540.1-201ENST00000413911 PIK3C2AO00443 1686 aa35.05■■■■□ 3.2
AC005540.1-201ENST00000413911 ZBTB7CA1YPR0 619 aa35.05■■■■□ 3.2
AC005540.1-201ENST00000413911 NEUROD1Q13562 356 aa35.05■■■■□ 3.2
AC005540.1-201ENST00000413911 THRAP3Q9Y2W1 955 aaKnown RBP35.05■■■■□ 3.2
AC005540.1-201ENST00000413911 EVC2Q86UK5 1308 aa35.05■■■■□ 3.2
AC005540.1-201ENST00000413911 AATKQ6ZMQ8 1374 aa35.02■■■■□ 3.2
AC005540.1-201ENST00000413911 CRB1P82279 1406 aa35.02■■■■□ 3.2
AC005540.1-201ENST00000413911 PARP4Q9UKK3 1724 aaKnown RBP35.01■■■■□ 3.2
AC005540.1-201ENST00000413911 ROCK2O75116 1388 aaKnown RBP35■■■■□ 3.19
AC005540.1-201ENST00000413911 COL18A1P39060 1754 aa35■■■■□ 3.19
AC005540.1-201ENST00000413911 AXIN2Q9Y2T1 843 aa34.99■■■■□ 3.19
AC005540.1-201ENST00000413911 PARD3Q8TEW0 1356 aa34.98■■■■□ 3.19
AC005540.1-201ENST00000413911 RREB1Q92766 1687 aa34.97■■■■□ 3.19
AC005540.1-201ENST00000413911 TTC21BQ7Z4L5 1316 aa34.97■■■■□ 3.19
AC005540.1-201ENST00000413911 AKAP12Q02952 1782 aa34.93■■■■□ 3.18
AC005540.1-201ENST00000413911 NUP188Q5SRE5 1749 aa34.93■■■■□ 3.18
AC005540.1-201ENST00000413911 PEAK1Q9H792 1746 aa34.93■■■■□ 3.18
AC005540.1-201ENST00000413911 ZNF692Q9BU19 519 aaPredicted RBP34.92■■■■□ 3.18
AC005540.1-201ENST00000413911 CPSF1Q10570 1443 aaKnown RBP34.91■■■■□ 3.18
AC005540.1-201ENST00000413911 ARHGEF25Q86VW2 580 aa34.91■■■■□ 3.18
AC005540.1-201ENST00000413911 LRRC37A3O60309 1634 aa34.91■■■■□ 3.18
AC005540.1-201ENST00000413911 TOM1L2Q6ZVM7 507 aa34.9■■■■□ 3.18
AC005540.1-201ENST00000413911 WDR17Q8IZU2 1322 aa34.88■■■■□ 3.17
AC005540.1-201ENST00000413911 SOX12O15370 315 aa34.88■■■■□ 3.17
AC005540.1-201ENST00000413911 OVOS2A0A0G2JMS6 1433 aa34.86■■■■□ 3.17
AC005540.1-201ENST00000413911 OVOS2A0A0J9YW53 1432 aa34.86■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms