RNA–Protein interactions for RNA: ENST00000413787.1

SLC6A8-202, Transcript of solute carrier family 6 member 8, humanhuman

TSL 5

Gene SLC6A8, Length 468 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-202ENST00000413787 ATRNO75882 1429 aa25.61■■□□□ 1.69
SLC6A8-202ENST00000413787 PCGF6Q9BYE7 350 aa25.6■■□□□ 1.69
SLC6A8-202ENST00000413787 PPIP5K1Q6PFW1 1433 aa25.6■■□□□ 1.69
SLC6A8-202ENST00000413787 EVC2Q86UK5 1308 aa25.6■■□□□ 1.69
SLC6A8-202ENST00000413787 SLIT2O94813 1529 aa25.59■■□□□ 1.69
SLC6A8-202ENST00000413787 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.58■■□□□ 1.69
SLC6A8-202ENST00000413787 CRYBG1Q9Y4K1 1723 aa25.57■■□□□ 1.68
SLC6A8-202ENST00000413787 RGS12O14924 1447 aa25.56■■□□□ 1.68
SLC6A8-202ENST00000413787 UNC5CLQ8IV45 518 aa25.55■■□□□ 1.68
SLC6A8-202ENST00000413787 PLCH1Q4KWH8 1693 aa25.55■■□□□ 1.68
SLC6A8-202ENST00000413787 CABP1Q9NZU7 370 aa25.54■■□□□ 1.68
SLC6A8-202ENST00000413787 SBNO2Q9Y2G9 1366 aa25.54■■□□□ 1.68
SLC6A8-202ENST00000413787 NWD2Q9ULI1 1742 aa25.54■■□□□ 1.68
SLC6A8-202ENST00000413787 FAM83GA6ND36 823 aa25.52■■□□□ 1.68
SLC6A8-202ENST00000413787 GJD4Q96KN9 370 aaPredicted RBP25.5■■□□□ 1.67
SLC6A8-202ENST00000413787 CLSPNQ9HAW4 1339 aa25.5■■□□□ 1.67
SLC6A8-202ENST00000413787 NUTM2GQ5VZR2 741 aa25.49■■□□□ 1.67
SLC6A8-202ENST00000413787 COL14A1Q05707 1796 aaKnown RBP25.48■■□□□ 1.67
SLC6A8-202ENST00000413787 PHRF1Q9P1Y6 1649 aaKnown RBP25.48■■□□□ 1.67
SLC6A8-202ENST00000413787 BRD4O60885 1362 aaPredicted RBP25.47■■□□□ 1.67
SLC6A8-202ENST00000413787 ABTB2Q8N961 1025 aa25.47■■□□□ 1.67
SLC6A8-202ENST00000413787 USP6P35125 1406 aa25.46■■□□□ 1.67
SLC6A8-202ENST00000413787 ATAD2Q6PL18 1390 aa25.46■■□□□ 1.67
SLC6A8-202ENST00000413787 GLI3P10071 1580 aa25.45■■□□□ 1.66
SLC6A8-202ENST00000413787 NRAPQ86VF7 1730 aa25.44■■□□□ 1.66
SLC6A8-202ENST00000413787 VPS72Q15906 364 aa25.44■■□□□ 1.66
SLC6A8-202ENST00000413787 UPF1Q92900 1129 aaKnown RBP eCLIP25.43■■□□□ 1.66
SLC6A8-202ENST00000413787 PRDM11Q9NQV5 511 aa25.43■■□□□ 1.66
SLC6A8-202ENST00000413787 BTG4Q9NY30 223 aa25.43■■□□□ 1.66
SLC6A8-202ENST00000413787 TIMELESSQ9UNS1 1208 aa25.43■■□□□ 1.66
SLC6A8-202ENST00000413787 AKAP12Q02952 1782 aa25.43■■□□□ 1.66
SLC6A8-202ENST00000413787 SSH2Q76I76 1423 aa25.42■■□□□ 1.66
SLC6A8-202ENST00000413787 KIAA0232Q92628 1395 aa25.42■■□□□ 1.66
SLC6A8-202ENST00000413787 USP19O94966 1318 aa25.41■■□□□ 1.66
SLC6A8-202ENST00000413787 NLRP13Q86W25 1043 aa25.41■■□□□ 1.66
SLC6A8-202ENST00000413787 ZNF692Q9BU19 519 aaPredicted RBP25.4■■□□□ 1.66
SLC6A8-202ENST00000413787 NRKQ7Z2Y5 1582 aa25.39■■□□□ 1.66
SLC6A8-202ENST00000413787 ST20-MTHFSA0A0A6YYL1 179 aa25.39■■□□□ 1.66
SLC6A8-202ENST00000413787 ZC3H6P61129 1189 aaKnown RBP25.39■■□□□ 1.66
SLC6A8-202ENST00000413787 CCDC9Q9Y3X0 531 aaKnown RBP25.39■■□□□ 1.66
SLC6A8-202ENST00000413787 CPSF1Q10570 1443 aaKnown RBP25.38■■□□□ 1.65
SLC6A8-202ENST00000413787 TESK2Q96S53 571 aa25.38■■□□□ 1.65
SLC6A8-202ENST00000413787 CHRNA2Q15822 529 aa25.37■■□□□ 1.65
SLC6A8-202ENST00000413787 PIK3C2AO00443 1686 aa25.36■■□□□ 1.65
SLC6A8-202ENST00000413787 GCP02774 474 aa25.35■■□□□ 1.65
SLC6A8-202ENST00000413787 NLRP6P59044 892 aa25.35■■□□□ 1.65
SLC6A8-202ENST00000413787 TTC21BQ7Z4L5 1316 aa25.35■■□□□ 1.65
SLC6A8-202ENST00000413787 MON2Q7Z3U7 1717 aa25.34■■□□□ 1.65
SLC6A8-202ENST00000413787 CPDO75976 1380 aa25.34■■□□□ 1.65
SLC6A8-202ENST00000413787 KTN1Q86UP2 1357 aaKnown RBP25.34■■□□□ 1.65
SLC6A8-202ENST00000413787 CCER1Q8TC90 406 aaPredicted RBP25.34■■□□□ 1.65
SLC6A8-202ENST00000413787 PUS7Q96PZ0 661 aaKnown RBP25.34■■□□□ 1.65
SLC6A8-202ENST00000413787 BRWD3Q6RI45 1802 aa25.34■■□□□ 1.65
SLC6A8-202ENST00000413787 USP47Q96K76 1375 aa25.33■■□□□ 1.65
SLC6A8-202ENST00000413787 ONECUT3O60422 494 aaPredicted RBP25.33■■□□□ 1.65
SLC6A8-202ENST00000413787 TMC1Q8TDI8 760 aa25.32■■□□□ 1.64
SLC6A8-202ENST00000413787 CD163L1Q9NR16 1453 aa25.32■■□□□ 1.64
SLC6A8-202ENST00000413787 SLIT3O75094 1523 aa25.32■■□□□ 1.64
SLC6A8-202ENST00000413787 SLC24A1O60721 1099 aa25.31■■□□□ 1.64
SLC6A8-202ENST00000413787 SEPT12Q8IYM1 358 aa25.31■■□□□ 1.64
SLC6A8-202ENST00000413787 SLC12A5Q9H2X9 1139 aa25.31■■□□□ 1.64
SLC6A8-202ENST00000413787 TTC21AQ8NDW8 1320 aa25.31■■□□□ 1.64
SLC6A8-202ENST00000413787 SPATA31A5Q5VU36 1347 aa25.3■■□□□ 1.64
SLC6A8-202ENST00000413787 SPATA31A7Q8IWB4 1347 aa25.3■■□□□ 1.64
SLC6A8-202ENST00000413787 EP400Q96L91 3159 aa25.3■■□□□ 1.64
SLC6A8-202ENST00000413787 LMO7Q8WWI1 1683 aa25.29■■□□□ 1.64
SLC6A8-202ENST00000413787 CAMTA1Q9Y6Y1 1673 aa25.29■■□□□ 1.64
SLC6A8-202ENST00000413787 STRN4Q9NRL3 753 aa25.27■■□□□ 1.64
SLC6A8-202ENST00000413787 FAM98CQ17RN3 349 aaKnown RBP25.26■■□□□ 1.63
SLC6A8-202ENST00000413787 HDGFL2Q7Z4V5 671 aaPredicted RBP25.26■■□□□ 1.63
SLC6A8-202ENST00000413787 TERF2IPQ9NYB0 399 aa25.25■■□□□ 1.63
SLC6A8-202ENST00000413787 SPATA31A1Q5TZJ5 1347 aa25.24■■□□□ 1.63
SLC6A8-202ENST00000413787 EVA1CP58658 441 aa25.24■■□□□ 1.63
SLC6A8-202ENST00000413787 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.24■■□□□ 1.63
SLC6A8-202ENST00000413787 A0A1W2PP64 1363 aa25.23■■□□□ 1.63
SLC6A8-202ENST00000413787 NINLQ9Y2I6 1382 aa25.23■■□□□ 1.63
SLC6A8-202ENST00000413787 A0A0G2JS52 829 aa25.23■■□□□ 1.63
SLC6A8-202ENST00000413787 MYT1Q01538 1121 aa25.23■■□□□ 1.63
SLC6A8-202ENST00000413787 TMF1P82094 1093 aa25.22■■□□□ 1.63
SLC6A8-202ENST00000413787 EDC4Q6P2E9 1401 aaKnown RBP25.21■■□□□ 1.63
SLC6A8-202ENST00000413787 AATKQ6ZMQ8 1374 aa25.21■■□□□ 1.63
SLC6A8-202ENST00000413787 ZBTB7CA1YPR0 619 aa25.21■■□□□ 1.63
SLC6A8-202ENST00000413787 KCNH5Q8NCM2 988 aa25.21■■□□□ 1.63
SLC6A8-202ENST00000413787 USP31Q70CQ4 1352 aa25.2■■□□□ 1.63
SLC6A8-202ENST00000413787 USP54Q70EL1 1684 aa25.2■■□□□ 1.63
SLC6A8-202ENST00000413787 THSD7AQ9UPZ6 1657 aa25.2■■□□□ 1.63
SLC6A8-202ENST00000413787 LARP1Q6PKG0 1096 aaKnown RBP25.2■■□□□ 1.62
SLC6A8-202ENST00000413787 KRT27Q7Z3Y8 459 aa25.2■■□□□ 1.62
SLC6A8-202ENST00000413787 ZRANB1Q9UGI0 708 aa25.2■■□□□ 1.62
SLC6A8-202ENST00000413787 COL18A1P39060 1754 aa25.2■■□□□ 1.62
SLC6A8-202ENST00000413787 NME9Q86XW9 330 aa25.19■■□□□ 1.62
SLC6A8-202ENST00000413787 COL5A2P05997 1499 aaPredicted RBP25.19■■□□□ 1.62
SLC6A8-202ENST00000413787 NFAT5O94916 1531 aa25.18■■□□□ 1.62
SLC6A8-202ENST00000413787 SOX12O15370 315 aa25.18■■□□□ 1.62
SLC6A8-202ENST00000413787 ARHGEF25Q86VW2 580 aa25.18■■□□□ 1.62
SLC6A8-202ENST00000413787 CCDC125Q86Z20 511 aa25.17■■□□□ 1.62
SLC6A8-202ENST00000413787 USP35Q9P2H5 1018 aa25.17■■□□□ 1.62
SLC6A8-202ENST00000413787 CDCA8Q53HL2 280 aa25.15■■□□□ 1.62
SLC6A8-202ENST00000413787 RGPD5Q99666 1765 aa25.14■■□□□ 1.62
SLC6A8-202ENST00000413787 BARGINQ6ZT62 677 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms