RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 FBXO45P0C2W1 286 aa8.45□□□□□ -1.06
HMGB3P31-201ENST00000413333 JUNDP17535 347 aa8.45□□□□□ -1.06
HMGB3P31-201ENST00000413333 MAP10Q9P2G4 905 aa8.45□□□□□ -1.06
HMGB3P31-201ENST00000413333 FKBPLQ9UIM3 349 aa8.45□□□□□ -1.06
HMGB3P31-201ENST00000413333 ZBBXA8MT70 800 aa8.44□□□□□ -1.06
HMGB3P31-201ENST00000413333 TBC1D9Q6ZT07 1266 aa8.44□□□□□ -1.06
HMGB3P31-201ENST00000413333 THAP11Q96EK4 314 aa8.44□□□□□ -1.06
HMGB3P31-201ENST00000413333 F12P00748 615 aaPredicted RBP8.43□□□□□ -1.06
HMGB3P31-201ENST00000413333 SRPK2P78362 688 aaKnown RBP8.43□□□□□ -1.06
HMGB3P31-201ENST00000413333 PTPRNQ16849 979 aa8.43□□□□□ -1.06
HMGB3P31-201ENST00000413333 CARNS1A5YM72 827 aa8.42□□□□□ -1.06
HMGB3P31-201ENST00000413333 COPS2P61201 443 aa8.42□□□□□ -1.06
HMGB3P31-201ENST00000413333 WBP1LQ9NX94 342 aa8.42□□□□□ -1.06
HMGB3P31-201ENST00000413333 MAFBQ9Y5Q3 323 aaPredicted RBP8.42□□□□□ -1.06
HMGB3P31-201ENST00000413333 ATP9BO43861 1147 aa8.4□□□□□ -1.06
HMGB3P31-201ENST00000413333 SPSB2Q99619 263 aa8.4□□□□□ -1.06
HMGB3P31-201ENST00000413333 GZF1Q9H116 711 aaPredicted RBP8.4□□□□□ -1.06
HMGB3P31-201ENST00000413333 ZC3H4Q9UPT8 1303 aaKnown RBP8.39□□□□□ -1.07
HMGB3P31-201ENST00000413333 PIK3CDO00329 1044 aa8.39□□□□□ -1.07
HMGB3P31-201ENST00000413333 FAM160A2Q8N612 972 aaPredicted RBP8.39□□□□□ -1.07
HMGB3P31-201ENST00000413333 NUDT12Q9BQG2 462 aa8.39□□□□□ -1.07
HMGB3P31-201ENST00000413333 USTQ9Y2C2 406 aa8.39□□□□□ -1.07
HMGB3P31-201ENST00000413333 CCNYL3P0C7X3 344 aa8.38□□□□□ -1.07
HMGB3P31-201ENST00000413333 RANGAP1P46060 587 aaPredicted RBP8.38□□□□□ -1.07
HMGB3P31-201ENST00000413333 MSS51Q4VC12 460 aa8.38□□□□□ -1.07
HMGB3P31-201ENST00000413333 NPM2Q86SE8 214 aaKnown RBP8.38□□□□□ -1.07
HMGB3P31-201ENST00000413333 VRTNQ9H8Y1 702 aa8.38□□□□□ -1.07
HMGB3P31-201ENST00000413333 PRDM9Q9NQV7 894 aa8.38□□□□□ -1.07
HMGB3P31-201ENST00000413333 SKIP12755 728 aa8.37□□□□□ -1.07
HMGB3P31-201ENST00000413333 KCNH2Q12809 1159 aa8.37□□□□□ -1.07
HMGB3P31-201ENST00000413333 EVA1BQ9NVM1 165 aa8.37□□□□□ -1.07
HMGB3P31-201ENST00000413333 DXOO77932 396 aaKnown RBP8.36□□□□□ -1.07
HMGB3P31-201ENST00000413333 ATG7O95352 703 aa8.36□□□□□ -1.07
HMGB3P31-201ENST00000413333 PTK2Q05397 1052 aa8.36□□□□□ -1.07
HMGB3P31-201ENST00000413333 CCDC24Q8N4L8 307 aa8.36□□□□□ -1.07
HMGB3P31-201ENST00000413333 ARMC2Q8NEN0 867 aa8.36□□□□□ -1.07
HMGB3P31-201ENST00000413333 TLL1O43897 1013 aa8.35□□□□□ -1.07
HMGB3P31-201ENST00000413333 BRD1O95696 1058 aa8.35□□□□□ -1.07
HMGB3P31-201ENST00000413333 TMCO4Q5TGY1 634 aa8.35□□□□□ -1.07
HMGB3P31-201ENST00000413333 THSD4Q6ZMP0 1018 aa8.35□□□□□ -1.07
HMGB3P31-201ENST00000413333 KCTD12Q96CX2 325 aaKnown RBP8.35□□□□□ -1.07
HMGB3P31-201ENST00000413333 PCDHB9Q9Y5E1 797 aa8.35□□□□□ -1.07
HMGB3P31-201ENST00000413333 MMP16P51512 607 aa8.34□□□□□ -1.07
HMGB3P31-201ENST00000413333 PDXDC2PQ6P474 469 aa8.34□□□□□ -1.07
HMGB3P31-201ENST00000413333 DEPDC4Q8N2C3 294 aa8.34□□□□□ -1.07
HMGB3P31-201ENST00000413333 USP17L3A6NCW0 530 aa8.33□□□□□ -1.08
HMGB3P31-201ENST00000413333 USP17L4A6NCW7 530 aa8.33□□□□□ -1.08
HMGB3P31-201ENST00000413333 PATL2C9JE40 543 aaKnown RBP8.33□□□□□ -1.08
HMGB3P31-201ENST00000413333 KCNA1Q09470 495 aa8.33□□□□□ -1.08
HMGB3P31-201ENST00000413333 SLFNL1Q499Z3 407 aa8.33□□□□□ -1.08
HMGB3P31-201ENST00000413333 NBPF14Q5TI25 921 aa8.33□□□□□ -1.08
HMGB3P31-201ENST00000413333 USP17L2Q6R6M4 530 aa8.33□□□□□ -1.08
HMGB3P31-201ENST00000413333 USP17L1Q7RTZ2 530 aa8.33□□□□□ -1.08
HMGB3P31-201ENST00000413333 FAM174AQ8TBP5 190 aa8.33□□□□□ -1.08
HMGB3P31-201ENST00000413333 USP17L5A8MUK1 530 aa8.32□□□□□ -1.08
HMGB3P31-201ENST00000413333 ZPR1O75312 459 aa8.32□□□□□ -1.08
HMGB3P31-201ENST00000413333 KANK4Q5T7N3 995 aaPredicted RBP8.32□□□□□ -1.08
HMGB3P31-201ENST00000413333 NFATC2IPQ8NCF5 419 aa8.32□□□□□ -1.08
HMGB3P31-201ENST00000413333 GPKOWQ92917 476 aaPredicted RBP eCLIP8.32□□□□□ -1.08
HMGB3P31-201ENST00000413333 ARHGAP9Q9BRR9 750 aa8.32□□□□□ -1.08
HMGB3P31-201ENST00000413333 CEP126Q9P2H0 1117 aa8.32□□□□□ -1.08
HMGB3P31-201ENST00000413333 GPSM3Q9Y4H4 160 aa8.32□□□□□ -1.08
HMGB3P31-201ENST00000413333 TMEM88BA6NKF7 163 aa8.31□□□□□ -1.08
HMGB3P31-201ENST00000413333 ADH1BP00325 375 aa8.31□□□□□ -1.08
HMGB3P31-201ENST00000413333 ZBTB33Q86T24 672 aa8.31□□□□□ -1.08
HMGB3P31-201ENST00000413333 RNF135Q8IUD6 432 aa8.31□□□□□ -1.08
HMGB3P31-201ENST00000413333 ZNF592Q92610 1267 aa8.31□□□□□ -1.08
HMGB3P31-201ENST00000413333 MTRQ99707 1265 aa8.31□□□□□ -1.08
HMGB3P31-201ENST00000413333 OCSTAMPQ9BR26 566 aa8.31□□□□□ -1.08
HMGB3P31-201ENST00000413333 UNC93B1Q9H1C4 597 aa8.31□□□□□ -1.08
HMGB3P31-201ENST00000413333 PTPN5P54829 565 aa8.3□□□□□ -1.08
HMGB3P31-201ENST00000413333 PTCRAQ6ISU1 281 aaPredicted RBP8.3□□□□□ -1.08
HMGB3P31-201ENST00000413333 ADAM32Q8TC27 787 aa8.3□□□□□ -1.08
HMGB3P31-201ENST00000413333 MKRN1Q9UHC7 482 aaKnown RBP8.3□□□□□ -1.08
HMGB3P31-201ENST00000413333 MFAP1P55081 439 aaKnown RBP8.29□□□□□ -1.08
HMGB3P31-201ENST00000413333 MCCD1P59942 119 aaPredicted RBP8.29□□□□□ -1.08
HMGB3P31-201ENST00000413333 PLEKHM2Q8IWE5 1019 aa8.29□□□□□ -1.08
HMGB3P31-201ENST00000413333 CARD14Q9BXL6 1004 aa8.29□□□□□ -1.08
HMGB3P31-201ENST00000413333 SLC6A16Q9GZN6 736 aa8.29□□□□□ -1.08
HMGB3P31-201ENST00000413333 NOVA2Q9UNW9 492 aaKnown RBP8.29□□□□□ -1.08
HMGB3P31-201ENST00000413333 MAGEB6P1A0A0J9YX57 407 aa8.28□□□□□ -1.08
HMGB3P31-201ENST00000413333 NCOA4Q13772 614 aa8.28□□□□□ -1.08
HMGB3P31-201ENST00000413333 TMEM164Q5U3C3 297 aa8.28□□□□□ -1.08
HMGB3P31-201ENST00000413333 LARP1Q6PKG0 1096 aaKnown RBP8.28□□□□□ -1.08
HMGB3P31-201ENST00000413333 DZIP3Q86Y13 1208 aaKnown RBP8.28□□□□□ -1.08
HMGB3P31-201ENST00000413333 CDAN1Q8IWY9 1227 aa8.28□□□□□ -1.08
HMGB3P31-201ENST00000413333 PLPP7Q8NBV4 271 aa8.28□□□□□ -1.08
HMGB3P31-201ENST00000413333 ZNF516Q92618 1163 aa8.28□□□□□ -1.08
HMGB3P31-201ENST00000413333 KRTAP3-3Q9BYR6 98 aa8.28□□□□□ -1.08
HMGB3P31-201ENST00000413333 KRTAP3-2Q9BYR7 98 aa8.28□□□□□ -1.08
HMGB3P31-201ENST00000413333 ZMIZ1Q9ULJ6 1067 aa8.28□□□□□ -1.08
HMGB3P31-201ENST00000413333 IVNS1ABPQ9Y6Y0 642 aa8.28□□□□□ -1.08
HMGB3P31-201ENST00000413333 RASA1P20936 1047 aa8.27□□□□□ -1.09
HMGB3P31-201ENST00000413333 ELOAQ14241 798 aaKnown RBP8.27□□□□□ -1.09
HMGB3P31-201ENST00000413333 NYAP1Q6ZVC0 841 aa8.27□□□□□ -1.09
HMGB3P31-201ENST00000413333 STK32AQ8WU08 396 aa8.27□□□□□ -1.09
HMGB3P31-201ENST00000413333 USP17L15C9J2P7 530 aa8.26□□□□□ -1.09
HMGB3P31-201ENST00000413333 USP17L10C9JJH3 530 aa8.26□□□□□ -1.09
HMGB3P31-201ENST00000413333 USP17L13C9JLJ4 530 aa8.26□□□□□ -1.09
HMGB3P31-201ENST00000413333 USP17L12C9JPN9 530 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms