RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 TRPM3Q9HCF6 1732 aaPredicted RBP18.57■□□□□ 0.56
SSB-203ENST00000413002 SOCS7O14512 581 aa18.57■□□□□ 0.56
SSB-203ENST00000413002 QTRT2Q9H974 415 aaKnown RBP18.56■□□□□ 0.56
SSB-203ENST00000413002 USP21Q9UK80 565 aa18.56■□□□□ 0.56
SSB-203ENST00000413002 TESK2Q96S53 571 aa18.55■□□□□ 0.56
SSB-203ENST00000413002 FNBP4Q8N3X1 1017 aaPredicted RBP18.54■□□□□ 0.56
SSB-203ENST00000413002 USP47Q96K76 1375 aa18.54■□□□□ 0.56
SSB-203ENST00000413002 SBNO2Q9Y2G9 1366 aa18.54■□□□□ 0.56
SSB-203ENST00000413002 RXRBP28702 533 aa18.53■□□□□ 0.56
SSB-203ENST00000413002 ABTB2Q8N961 1025 aa18.52■□□□□ 0.56
SSB-203ENST00000413002 TMC1Q8TDI8 760 aa18.52■□□□□ 0.56
SSB-203ENST00000413002 ALS2Q96Q42 1657 aa18.52■□□□□ 0.56
SSB-203ENST00000413002 FAM83GA6ND36 823 aa18.51■□□□□ 0.55
SSB-203ENST00000413002 ATAD2Q6PL18 1390 aa18.51■□□□□ 0.55
SSB-203ENST00000413002 SLC12A5Q9H2X9 1139 aa18.5■□□□□ 0.55
SSB-203ENST00000413002 BCL9LQ86UU0 1499 aa18.5■□□□□ 0.55
SSB-203ENST00000413002 USP6P35125 1406 aa18.49■□□□□ 0.55
SSB-203ENST00000413002 ZC3H6P61129 1189 aaKnown RBP18.48■□□□□ 0.55
SSB-203ENST00000413002 TRPC5Q9UL62 973 aaPredicted RBP18.48■□□□□ 0.55
SSB-203ENST00000413002 ABCA3Q99758 1704 aa18.47■□□□□ 0.55
SSB-203ENST00000413002 RBM6P78332 1123 aaKnown RBP18.47■□□□□ 0.55
SSB-203ENST00000413002 MARF1Q9Y4F3 1742 aaKnown RBP18.46■□□□□ 0.55
SSB-203ENST00000413002 SLIT2O94813 1529 aa18.46■□□□□ 0.55
SSB-203ENST00000413002 CHRNA2Q15822 529 aa18.46■□□□□ 0.55
SSB-203ENST00000413002 UNC5CLQ8IV45 518 aa18.46■□□□□ 0.55
SSB-203ENST00000413002 KTN1Q86UP2 1357 aaKnown RBP18.45■□□□□ 0.54
SSB-203ENST00000413002 NLRP6P59044 892 aa18.45■□□□□ 0.54
SSB-203ENST00000413002 ZNF692Q9BU19 519 aaPredicted RBP18.45■□□□□ 0.54
SSB-203ENST00000413002 ATRNO75882 1429 aa18.45■□□□□ 0.54
SSB-203ENST00000413002 TTC21BQ7Z4L5 1316 aa18.45■□□□□ 0.54
SSB-203ENST00000413002 KIAA0232Q92628 1395 aa18.44■□□□□ 0.54
SSB-203ENST00000413002 CPSF1Q10570 1443 aaKnown RBP18.44■□□□□ 0.54
SSB-203ENST00000413002 SSH2Q76I76 1423 aa18.44■□□□□ 0.54
SSB-203ENST00000413002 NLRP13Q86W25 1043 aa18.44■□□□□ 0.54
SSB-203ENST00000413002 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.44■□□□□ 0.54
SSB-203ENST00000413002 PRDM11Q9NQV5 511 aa18.44■□□□□ 0.54
SSB-203ENST00000413002 BTG4Q9NY30 223 aa18.44■□□□□ 0.54
SSB-203ENST00000413002 TMF1P82094 1093 aa18.43■□□□□ 0.54
SSB-203ENST00000413002 ZRANB1Q9UGI0 708 aa18.43■□□□□ 0.54
SSB-203ENST00000413002 CD163L1Q9NR16 1453 aa18.42■□□□□ 0.54
SSB-203ENST00000413002 ZBTB7CA1YPR0 619 aa18.42■□□□□ 0.54
SSB-203ENST00000413002 GJD4Q96KN9 370 aaPredicted RBP18.42■□□□□ 0.54
SSB-203ENST00000413002 CCDC9Q9Y3X0 531 aaKnown RBP18.42■□□□□ 0.54
SSB-203ENST00000413002 USP19O94966 1318 aa18.42■□□□□ 0.54
SSB-203ENST00000413002 RGS12O14924 1447 aa18.41■□□□□ 0.54
SSB-203ENST00000413002 CRYBG1Q9Y4K1 1723 aa18.41■□□□□ 0.54
SSB-203ENST00000413002 SOX12O15370 315 aa18.41■□□□□ 0.54
SSB-203ENST00000413002 GCP02774 474 aa18.41■□□□□ 0.54
SSB-203ENST00000413002 HDGFL2Q7Z4V5 671 aaPredicted RBP18.41■□□□□ 0.54
SSB-203ENST00000413002 BRD4O60885 1362 aaPredicted RBP18.41■□□□□ 0.54
SSB-203ENST00000413002 HSPA5P11021 654 aaKnown RBP18.4■□□□□ 0.54
SSB-203ENST00000413002 PUS7Q96PZ0 661 aaKnown RBP18.4■□□□□ 0.54
SSB-203ENST00000413002 PHRF1Q9P1Y6 1649 aaKnown RBP18.39■□□□□ 0.53
SSB-203ENST00000413002 NME9Q86XW9 330 aa18.39■□□□□ 0.53
SSB-203ENST00000413002 TERF2IPQ9NYB0 399 aa18.39■□□□□ 0.53
SSB-203ENST00000413002 A0A1W2PP64 1363 aa18.39■□□□□ 0.53
SSB-203ENST00000413002 PLCH1Q4KWH8 1693 aa18.38■□□□□ 0.53
SSB-203ENST00000413002 SLC24A1O60721 1099 aa18.38■□□□□ 0.53
SSB-203ENST00000413002 VPS72Q15906 364 aa18.38■□□□□ 0.53
SSB-203ENST00000413002 POLR3GLQ9BT43 218 aa18.38■□□□□ 0.53
SSB-203ENST00000413002 STRN4Q9NRL3 753 aa18.38■□□□□ 0.53
SSB-203ENST00000413002 AKAP12Q02952 1782 aa18.37■□□□□ 0.53
SSB-203ENST00000413002 EIF4G2P78344 907 aaKnown RBP eCLIP18.37■□□□□ 0.53
SSB-203ENST00000413002 TTC21AQ8NDW8 1320 aa18.37■□□□□ 0.53
SSB-203ENST00000413002 NRKQ7Z2Y5 1582 aa18.37■□□□□ 0.53
SSB-203ENST00000413002 PIK3C2AO00443 1686 aa18.37■□□□□ 0.53
SSB-203ENST00000413002 CDK12Q9NYV4 1490 aaPredicted RBP18.36■□□□□ 0.53
SSB-203ENST00000413002 COL14A1Q05707 1796 aaKnown RBP18.35■□□□□ 0.53
SSB-203ENST00000413002 GLI3P10071 1580 aa18.34■□□□□ 0.53
SSB-203ENST00000413002 MON2Q7Z3U7 1717 aa18.33■□□□□ 0.52
SSB-203ENST00000413002 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.33■□□□□ 0.52
SSB-203ENST00000413002 CDCA8Q53HL2 280 aa18.33■□□□□ 0.52
SSB-203ENST00000413002 EDC4Q6P2E9 1401 aaKnown RBP18.32■□□□□ 0.52
SSB-203ENST00000413002 NWD2Q9ULI1 1742 aa18.32■□□□□ 0.52
SSB-203ENST00000413002 CPDO75976 1380 aa18.32■□□□□ 0.52
SSB-203ENST00000413002 EVA1CP58658 441 aa18.32■□□□□ 0.52
SSB-203ENST00000413002 USP35Q9P2H5 1018 aa18.32■□□□□ 0.52
SSB-203ENST00000413002 SLIT3O75094 1523 aa18.32■□□□□ 0.52
SSB-203ENST00000413002 NINLQ9Y2I6 1382 aa18.31■□□□□ 0.52
SSB-203ENST00000413002 A0A0G2JS52 829 aa18.31■□□□□ 0.52
SSB-203ENST00000413002 MYT1Q01538 1121 aa18.31■□□□□ 0.52
SSB-203ENST00000413002 FAM98CQ17RN3 349 aaKnown RBP18.31■□□□□ 0.52
SSB-203ENST00000413002 SEPT12Q8IYM1 358 aa18.31■□□□□ 0.52
SSB-203ENST00000413002 NRAPQ86VF7 1730 aa18.31■□□□□ 0.52
SSB-203ENST00000413002 CAMTA1Q9Y6Y1 1673 aa18.31■□□□□ 0.52
SSB-203ENST00000413002 SPATA31A5Q5VU36 1347 aa18.3■□□□□ 0.52
SSB-203ENST00000413002 SPATA31A7Q8IWB4 1347 aa18.3■□□□□ 0.52
SSB-203ENST00000413002 LARP1Q6PKG0 1096 aaKnown RBP18.3■□□□□ 0.52
SSB-203ENST00000413002 ANKRD36BQ8N2N9 1353 aa18.3■□□□□ 0.52
SSB-203ENST00000413002 KCNH5Q8NCM2 988 aa18.29■□□□□ 0.52
SSB-203ENST00000413002 UPF1Q92900 1129 aaKnown RBP eCLIP18.29■□□□□ 0.52
SSB-203ENST00000413002 AXIN2Q9Y2T1 843 aa18.29■□□□□ 0.52
SSB-203ENST00000413002 USP31Q70CQ4 1352 aa18.29■□□□□ 0.52
SSB-203ENST00000413002 C11orf95C9JLR9 678 aaPredicted RBP18.28■□□□□ 0.52
SSB-203ENST00000413002 ARHGEF25Q86VW2 580 aa18.28■□□□□ 0.52
SSB-203ENST00000413002 FBLN1P23142 703 aa18.27■□□□□ 0.52
SSB-203ENST00000413002 CARD14Q9BXL6 1004 aa18.27■□□□□ 0.52
SSB-203ENST00000413002 SPATA31A1Q5TZJ5 1347 aa18.26■□□□□ 0.51
SSB-203ENST00000413002 ONECUT3O60422 494 aaPredicted RBP18.26■□□□□ 0.51
SSB-203ENST00000413002 GGNBP2Q9H3C7 697 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms