RNA–Protein interactions for RNA: ENST00000412466.1

PMS2P4-201, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 4, humanhuman

BASIC

Gene PMS2P4, Length 1,052 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P4-201ENST00000412466 CABLES1Q8TDN4 633 aa23.61■■□□□ 1.37
PMS2P4-201ENST00000412466 ARHGEF28Q8N1W1 1705 aaKnown RBP23.6■■□□□ 1.37
PMS2P4-201ENST00000412466 SF3B2Q13435 895 aaKnown RBP23.6■■□□□ 1.37
PMS2P4-201ENST00000412466 PMFBP1Q8TBY8 1022 aa23.6■■□□□ 1.37
PMS2P4-201ENST00000412466 SEPT12Q8IYM1 358 aa23.59■■□□□ 1.37
PMS2P4-201ENST00000412466 ALS2Q96Q42 1657 aa23.59■■□□□ 1.37
PMS2P4-201ENST00000412466 ITSN1Q15811 1721 aa23.59■■□□□ 1.37
PMS2P4-201ENST00000412466 NRAPQ86VF7 1730 aa23.58■■□□□ 1.37
PMS2P4-201ENST00000412466 COL14A1Q05707 1796 aaKnown RBP23.57■■□□□ 1.36
PMS2P4-201ENST00000412466 MINK1Q8N4C8 1332 aaPredicted RBP23.57■■□□□ 1.36
PMS2P4-201ENST00000412466 SLC24A1O60721 1099 aa23.56■■□□□ 1.36
PMS2P4-201ENST00000412466 HIRIP3Q9BW71 556 aaPredicted RBP23.56■■□□□ 1.36
PMS2P4-201ENST00000412466 A0A0G2JS52 829 aa23.55■■□□□ 1.36
PMS2P4-201ENST00000412466 MYT1Q01538 1121 aa23.55■■□□□ 1.36
PMS2P4-201ENST00000412466 CENPJQ9HC77 1338 aaPredicted RBP23.55■■□□□ 1.36
PMS2P4-201ENST00000412466 KRT27Q7Z3Y8 459 aa23.52■■□□□ 1.36
PMS2P4-201ENST00000412466 USP47Q96K76 1375 aa23.52■■□□□ 1.36
PMS2P4-201ENST00000412466 WASLO00401 505 aaPredicted RBP23.51■■□□□ 1.35
PMS2P4-201ENST00000412466 NGDNQ8NEJ9 315 aaKnown RBP23.51■■□□□ 1.35
PMS2P4-201ENST00000412466 CRYBG1Q9Y4K1 1723 aa23.5■■□□□ 1.35
PMS2P4-201ENST00000412466 FAM83GA6ND36 823 aa23.5■■□□□ 1.35
PMS2P4-201ENST00000412466 ONECUT3O60422 494 aaPredicted RBP23.5■■□□□ 1.35
PMS2P4-201ENST00000412466 EIF4G2P78344 907 aaKnown RBP eCLIP23.5■■□□□ 1.35
PMS2P4-201ENST00000412466 PRR36Q9H6K5 1346 aa23.5■■□□□ 1.35
PMS2P4-201ENST00000412466 QRICH2Q9H0J4 1663 aa23.49■■□□□ 1.35
PMS2P4-201ENST00000412466 BTG4Q9NY30 223 aa23.49■■□□□ 1.35
PMS2P4-201ENST00000412466 SBNO2Q9Y2G9 1366 aa23.48■■□□□ 1.35
PMS2P4-201ENST00000412466 PAK3O75914 559 aaPredicted RBP23.47■■□□□ 1.35
PMS2P4-201ENST00000412466 DEFB132Q7Z7B7 95 aa23.47■■□□□ 1.35
PMS2P4-201ENST00000412466 ATP7BP35670 1465 aa23.47■■□□□ 1.35
PMS2P4-201ENST00000412466 ST20-MTHFSA0A0A6YYL1 179 aa23.46■■□□□ 1.35
PMS2P4-201ENST00000412466 RGPD1P0DJD0 1748 aa23.46■■□□□ 1.35
PMS2P4-201ENST00000412466 FAM98CQ17RN3 349 aaKnown RBP23.45■■□□□ 1.34
PMS2P4-201ENST00000412466 PHRF1Q9P1Y6 1649 aaKnown RBP23.44■■□□□ 1.34
PMS2P4-201ENST00000412466 BAG6P46379 1132 aa23.44■■□□□ 1.34
PMS2P4-201ENST00000412466 PRDM11Q9NQV5 511 aa23.43■■□□□ 1.34
PMS2P4-201ENST00000412466 TOPAZ1Q8N9V7 1692 aa23.42■■□□□ 1.34
PMS2P4-201ENST00000412466 THSD7AQ9UPZ6 1657 aa23.41■■□□□ 1.34
PMS2P4-201ENST00000412466 LRP5O75197 1615 aa23.41■■□□□ 1.34
PMS2P4-201ENST00000412466 EVC2Q86UK5 1308 aa23.41■■□□□ 1.34
PMS2P4-201ENST00000412466 SRCAPQ6ZRS2 3230 aa23.4■■□□□ 1.34
PMS2P4-201ENST00000412466 SPATA31A5Q5VU36 1347 aa23.4■■□□□ 1.34
PMS2P4-201ENST00000412466 SPATA31A7Q8IWB4 1347 aa23.4■■□□□ 1.34
PMS2P4-201ENST00000412466 NUDT16Q96DE0 195 aaKnown RBP23.4■■□□□ 1.34
PMS2P4-201ENST00000412466 HSPA5P11021 654 aaKnown RBP23.39■■□□□ 1.33
PMS2P4-201ENST00000412466 TESK2Q96S53 571 aa23.39■■□□□ 1.33
PMS2P4-201ENST00000412466 TMF1P82094 1093 aa23.37■■□□□ 1.33
PMS2P4-201ENST00000412466 PUS7Q96PZ0 661 aaKnown RBP23.37■■□□□ 1.33
PMS2P4-201ENST00000412466 CDK19Q9BWU1 502 aa23.37■■□□□ 1.33
PMS2P4-201ENST00000412466 CDCA8Q53HL2 280 aa23.36■■□□□ 1.33
PMS2P4-201ENST00000412466 KIAA0232Q92628 1395 aa23.36■■□□□ 1.33
PMS2P4-201ENST00000412466 POLR3AO14802 1390 aaPredicted RBP23.34■■□□□ 1.33
PMS2P4-201ENST00000412466 TNS1Q9HBL0 1735 aaKnown RBP23.33■■□□□ 1.33
PMS2P4-201ENST00000412466 SRPK2P78362 688 aaKnown RBP23.33■■□□□ 1.33
PMS2P4-201ENST00000412466 NRKQ7Z2Y5 1582 aa23.32■■□□□ 1.32
PMS2P4-201ENST00000412466 DISP2A7MBM2 1401 aa23.32■■□□□ 1.32
PMS2P4-201ENST00000412466 CCDC61Q9Y6R9 512 aa23.31■■□□□ 1.32
PMS2P4-201ENST00000412466 ACEP12821 1306 aa23.31■■□□□ 1.32
PMS2P4-201ENST00000412466 SPATA31A1Q5TZJ5 1347 aa23.31■■□□□ 1.32
PMS2P4-201ENST00000412466 STRN4Q9NRL3 753 aa23.3■■□□□ 1.32
PMS2P4-201ENST00000412466 CHRNA2Q15822 529 aa23.29■■□□□ 1.32
PMS2P4-201ENST00000412466 ZC3H6P61129 1189 aaKnown RBP23.28■■□□□ 1.32
PMS2P4-201ENST00000412466 NUTM2GQ5VZR2 741 aa23.28■■□□□ 1.32
PMS2P4-201ENST00000412466 SSH2Q76I76 1423 aa23.27■■□□□ 1.32
PMS2P4-201ENST00000412466 PLEKHG3A1L390 1219 aa23.27■■□□□ 1.32
PMS2P4-201ENST00000412466 PSDA5PKW4 1024 aaPredicted RBP23.27■■□□□ 1.32
PMS2P4-201ENST00000412466 EN1Q05925 392 aaPredicted RBP23.27■■□□□ 1.32
PMS2P4-201ENST00000412466 CABP2Q9NPB3 220 aa23.27■■□□□ 1.32
PMS2P4-201ENST00000412466 EVA1CP58658 441 aa23.26■■□□□ 1.31
PMS2P4-201ENST00000412466 FAM182BQ5T319 152 aa23.26■■□□□ 1.31
PMS2P4-201ENST00000412466 FAM196AQ6ZSG2 479 aa23.25■■□□□ 1.31
PMS2P4-201ENST00000412466 ABTB2Q8N961 1025 aa23.25■■□□□ 1.31
PMS2P4-201ENST00000412466 PPIP5K1Q6PFW1 1433 aa23.25■■□□□ 1.31
PMS2P4-201ENST00000412466 LMO7Q8WWI1 1683 aa23.24■■□□□ 1.31
PMS2P4-201ENST00000412466 BRD4O60885 1362 aaPredicted RBP23.24■■□□□ 1.31
PMS2P4-201ENST00000412466 CPDO75976 1380 aa23.24■■□□□ 1.31
PMS2P4-201ENST00000412466 USP19O94966 1318 aa23.23■■□□□ 1.31
PMS2P4-201ENST00000412466 PARD3Q8TEW0 1356 aa23.23■■□□□ 1.31
PMS2P4-201ENST00000412466 USP35Q9P2H5 1018 aa23.22■■□□□ 1.31
PMS2P4-201ENST00000412466 NINLQ9Y2I6 1382 aa23.22■■□□□ 1.31
PMS2P4-201ENST00000412466 PDE3BQ13370 1112 aa23.21■■□□□ 1.31
PMS2P4-201ENST00000412466 BARGINQ6ZT62 677 aa23.21■■□□□ 1.31
PMS2P4-201ENST00000412466 NLRP13Q86W25 1043 aa23.21■■□□□ 1.31
PMS2P4-201ENST00000412466 CAMTA1Q9Y6Y1 1673 aa23.2■■□□□ 1.3
PMS2P4-201ENST00000412466 TRIM37O94972 964 aa23.18■■□□□ 1.3
PMS2P4-201ENST00000412466 R3HDM1Q15032 1099 aaKnown RBP23.18■■□□□ 1.3
PMS2P4-201ENST00000412466 TCP11L2Q8N4U5 519 aa23.18■■□□□ 1.3
PMS2P4-201ENST00000412466 CABP1Q9NZU7 370 aa23.18■■□□□ 1.3
PMS2P4-201ENST00000412466 PARP4Q9UKK3 1724 aaKnown RBP23.17■■□□□ 1.3
PMS2P4-201ENST00000412466 RREB1Q92766 1687 aa23.17■■□□□ 1.3
PMS2P4-201ENST00000412466 EZH2Q15910 746 aaKnown RBP23.17■■□□□ 1.3
PMS2P4-201ENST00000412466 THRAP3Q9Y2W1 955 aaKnown RBP23.17■■□□□ 1.3
PMS2P4-201ENST00000412466 LARP1Q6PKG0 1096 aaKnown RBP23.16■■□□□ 1.3
PMS2P4-201ENST00000412466 ZNF692Q9BU19 519 aaPredicted RBP23.16■■□□□ 1.3
PMS2P4-201ENST00000412466 COL5A2P05997 1499 aaPredicted RBP23.16■■□□□ 1.3
PMS2P4-201ENST00000412466 APBA3O96018 575 aa23.15■■□□□ 1.3
PMS2P4-201ENST00000412466 GCP02774 474 aa23.15■■□□□ 1.3
PMS2P4-201ENST00000412466 TMC1Q8TDI8 760 aa23.15■■□□□ 1.3
PMS2P4-201ENST00000412466 USP6P35125 1406 aa23.15■■□□□ 1.3
PMS2P4-201ENST00000412466 TERF2IPQ9NYB0 399 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms