RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 LRRCC1Q9C099 1032 aa8.76□□□□□ -1.01
PTPN3-203ENST00000412145 TBC1D2BQ9UPU7 963 aa8.76□□□□□ -1.01
PTPN3-203ENST00000412145 IMMTQ16891 758 aaKnown RBP8.76□□□□□ -1.01
PTPN3-203ENST00000412145 HOOK3Q86VS8 718 aa8.76□□□□□ -1.01
PTPN3-203ENST00000412145 CIZ1Q9ULV3 898 aaPredicted RBP8.76□□□□□ -1.01
PTPN3-203ENST00000412145 NOL8Q76FK4 1167 aaKnown RBP8.75□□□□□ -1.01
PTPN3-203ENST00000412145 RBM33Q96EV2 1170 aaKnown RBP8.75□□□□□ -1.01
PTPN3-203ENST00000412145 MPHOSPH9Q99550 1183 aa8.75□□□□□ -1.01
PTPN3-203ENST00000412145 VPS37CA5D8V6 355 aaPredicted RBP8.75□□□□□ -1.01
PTPN3-203ENST00000412145 PPP1R12BO60237 982 aaPredicted RBP8.75□□□□□ -1.01
PTPN3-203ENST00000412145 VGFO15240 615 aaPredicted RBP8.75□□□□□ -1.01
PTPN3-203ENST00000412145 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.75□□□□□ -1.01
PTPN3-203ENST00000412145 SMC1AQ14683 1233 aaKnown RBP8.75□□□□□ -1.01
PTPN3-203ENST00000412145 CCDC83Q8IWF9 413 aa8.75□□□□□ -1.01
PTPN3-203ENST00000412145 GCOM1H8Y6P7 765 aaPredicted RBP8.75□□□□□ -1.01
PTPN3-203ENST00000412145 MYZAPP0CAP1 466 aa8.75□□□□□ -1.01
PTPN3-203ENST00000412145 CCDC146Q8IYE0 955 aa8.75□□□□□ -1.01
PTPN3-203ENST00000412145 RAB3GAP2Q9H2M9 1393 aa8.74□□□□□ -1.01
PTPN3-203ENST00000412145 GIGYF2Q6Y7W6 1299 aaKnown RBP8.74□□□□□ -1.01
PTPN3-203ENST00000412145 SMTNL1A8MU46 457 aa8.74□□□□□ -1.01
PTPN3-203ENST00000412145 CALCOCO1Q9P1Z2 691 aa8.74□□□□□ -1.01
PTPN3-203ENST00000412145 CCDC148Q8NFR7 591 aa8.74□□□□□ -1.01
PTPN3-203ENST00000412145 WASF1Q92558 559 aa8.74□□□□□ -1.01
PTPN3-203ENST00000412145 TRIM22Q8IYM9 498 aa8.74□□□□□ -1.01
PTPN3-203ENST00000412145 PDILTQ8N807 584 aa8.74□□□□□ -1.01
PTPN3-203ENST00000412145 PHF23Q9BUL5 403 aaPredicted RBP8.74□□□□□ -1.01
PTPN3-203ENST00000412145 MROH2BQ7Z745 1585 aa8.74□□□□□ -1.01
PTPN3-203ENST00000412145 PAF1Q8N7H5 531 aa8.74□□□□□ -1.01
PTPN3-203ENST00000412145 GNL3LQ9NVN8 582 aaKnown RBP8.74□□□□□ -1.01
PTPN3-203ENST00000412145 TUBB4BP68371 445 aa8.74□□□□□ -1.01
PTPN3-203ENST00000412145 VPS36Q86VN1 386 aa8.74□□□□□ -1.01
PTPN3-203ENST00000412145 ZNF397Q8NF99 534 aaPredicted RBP8.74□□□□□ -1.01
PTPN3-203ENST00000412145 C22orf23Q9BZE7 217 aa8.74□□□□□ -1.01
PTPN3-203ENST00000412145 BMP2KQ9NSY1 1161 aaPredicted RBP8.74□□□□□ -1.01
PTPN3-203ENST00000412145 PLEKHH1Q9ULM0 1364 aa8.73□□□□□ -1.01
PTPN3-203ENST00000412145 GNAI3P08754 354 aa8.73□□□□□ -1.01
PTPN3-203ENST00000412145 EVA1CP58658 441 aa8.73□□□□□ -1.01
PTPN3-203ENST00000412145 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.73□□□□□ -1.01
PTPN3-203ENST00000412145 LTV1Q96GA3 475 aaPredicted RBP8.73□□□□□ -1.01
PTPN3-203ENST00000412145 WDR33Q9C0J8 1336 aaKnown RBP8.73□□□□□ -1.01
PTPN3-203ENST00000412145 CCDC57Q2TAC2 916 aa8.73□□□□□ -1.01
PTPN3-203ENST00000412145 MEX3CQ5U5Q3 659 aaKnown RBP8.73□□□□□ -1.01
PTPN3-203ENST00000412145 CFAP45Q9UL16 551 aa8.73□□□□□ -1.01
PTPN3-203ENST00000412145 ZSCAN12O43309 604 aa8.73□□□□□ -1.01
PTPN3-203ENST00000412145 NEMFO60524 1076 aa8.73□□□□□ -1.01
PTPN3-203ENST00000412145 CAVIN2O95810 425 aa8.73□□□□□ -1.01
PTPN3-203ENST00000412145 NOL7Q9UMY1 257 aaKnown RBP8.73□□□□□ -1.01
PTPN3-203ENST00000412145 ZSCAN25Q6NSZ9 544 aa8.73□□□□□ -1.01
PTPN3-203ENST00000412145 TAOK3Q9H2K8 898 aa8.73□□□□□ -1.01
PTPN3-203ENST00000412145 GOLGA6L9A6NEM1 432 aa8.72□□□□□ -1.01
PTPN3-203ENST00000412145 TAF4BQ92750 862 aa8.72□□□□□ -1.01
PTPN3-203ENST00000412145 SRCIN1Q9C0H9 1055 aa8.72□□□□□ -1.01
PTPN3-203ENST00000412145 C6orf163Q5TEZ5 329 aa8.72□□□□□ -1.01
PTPN3-203ENST00000412145 CEP57L1Q8IYX8 460 aa8.72□□□□□ -1.01
PTPN3-203ENST00000412145 HMGB3O15347 200 aaKnown RBP8.72□□□□□ -1.01
PTPN3-203ENST00000412145 FGFR1OPO95684 399 aaKnown RBP8.72□□□□□ -1.01
PTPN3-203ENST00000412145 KIF20AO95235 890 aa8.71□□□□□ -1.01
PTPN3-203ENST00000412145 SREK1Q8WXA9 508 aaKnown RBP8.71□□□□□ -1.01
PTPN3-203ENST00000412145 CRACR2AQ9BSW2 395 aa8.71□□□□□ -1.01
PTPN3-203ENST00000412145 CEP131Q9UPN4 1083 aa8.71□□□□□ -1.01
PTPN3-203ENST00000412145 SPECC1LQ69YQ0 1117 aa8.71□□□□□ -1.02
PTPN3-203ENST00000412145 NACAP1Q9BZK3 213 aa8.71□□□□□ -1.02
PTPN3-203ENST00000412145 KRT18P05783 430 aaKnown RBP8.71□□□□□ -1.02
PTPN3-203ENST00000412145 PTPRGP23470 1445 aa8.71□□□□□ -1.02
PTPN3-203ENST00000412145 GRIPAP1Q4V328 841 aa8.71□□□□□ -1.02
PTPN3-203ENST00000412145 GCC1Q96CN9 775 aa8.71□□□□□ -1.02
PTPN3-203ENST00000412145 PHAXQ9H814 394 aaKnown RBP8.71□□□□□ -1.02
PTPN3-203ENST00000412145 SMG6Q86US8 1419 aaKnown RBP8.71□□□□□ -1.02
PTPN3-203ENST00000412145 FYB1O15117 783 aa8.71□□□□□ -1.02
PTPN3-203ENST00000412145 TUBB4AP04350 444 aa8.71□□□□□ -1.02
PTPN3-203ENST00000412145 BBXQ8WY36 941 aaPredicted RBP8.71□□□□□ -1.02
PTPN3-203ENST00000412145 MSH5O43196 834 aa8.7□□□□□ -1.02
PTPN3-203ENST00000412145 KRT32Q14532 448 aa8.7□□□□□ -1.02
PTPN3-203ENST00000412145 PYM1Q9BRP8 204 aaKnown RBP8.7□□□□□ -1.02
PTPN3-203ENST00000412145 ZSCAN31Q96LW9 406 aaPredicted RBP8.7□□□□□ -1.02
PTPN3-203ENST00000412145 EPB41L2O43491 1005 aaKnown RBP8.7□□□□□ -1.02
PTPN3-203ENST00000412145 TTLL5Q6EMB2 1281 aa8.7□□□□□ -1.02
PTPN3-203ENST00000412145 RUNDC1Q96C34 613 aa8.7□□□□□ -1.02
PTPN3-203ENST00000412145 FOXD4L1Q9NU39 408 aa8.7□□□□□ -1.02
PTPN3-203ENST00000412145 ABCC8Q09428 1581 aa8.7□□□□□ -1.02
PTPN3-203ENST00000412145 FERMT1Q9BQL6 677 aa8.7□□□□□ -1.02
PTPN3-203ENST00000412145 CEP63Q96MT8 703 aa8.7□□□□□ -1.02
PTPN3-203ENST00000412145 MCM5P33992 734 aa8.7□□□□□ -1.02
PTPN3-203ENST00000412145 KRT85P78386 507 aa8.7□□□□□ -1.02
PTPN3-203ENST00000412145 STK38Q15208 465 aa8.7□□□□□ -1.02
PTPN3-203ENST00000412145 KANK4Q5T7N3 995 aaPredicted RBP8.7□□□□□ -1.02
PTPN3-203ENST00000412145 PLCD4Q9BRC7 762 aa8.7□□□□□ -1.02
PTPN3-203ENST00000412145 PDCL3Q9H2J4 239 aa8.7□□□□□ -1.02
PTPN3-203ENST00000412145 NAA15Q9BXJ9 866 aaKnown RBP8.69□□□□□ -1.02
PTPN3-203ENST00000412145 TRAK1Q9UPV9 953 aa8.69□□□□□ -1.02
PTPN3-203ENST00000412145 EHBP1Q8NDI1 1231 aa8.69□□□□□ -1.02
PTPN3-203ENST00000412145 ZNF428Q96B54 188 aa8.69□□□□□ -1.02
PTPN3-203ENST00000412145 ANKRD62A6NC57 917 aa8.69□□□□□ -1.02
PTPN3-203ENST00000412145 SERPINC1P01008 464 aa8.69□□□□□ -1.02
PTPN3-203ENST00000412145 FILIP1Q7Z7B0 1213 aa8.69□□□□□ -1.02
PTPN3-203ENST00000412145 MAP2K1Q02750 393 aaPredicted RBP8.69□□□□□ -1.02
PTPN3-203ENST00000412145 BRD4O60885 1362 aaPredicted RBP8.69□□□□□ -1.02
PTPN3-203ENST00000412145 CLUAP1Q96AJ1 413 aa8.69□□□□□ -1.02
PTPN3-203ENST00000412145 TMEM132AQ24JP5 1023 aa8.69□□□□□ -1.02
PTPN3-203ENST00000412145 ZNF287Q9HBT7 754 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms