RNA–Protein interactions for RNA: ENST00000412036.6

CXXC1-202, Transcript of CXXC finger protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXXC1, Length 2,280 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-202ENST00000412036 TTC21BQ7Z4L5 1316 aa24.25■■□□□ 1.47
CXXC1-202ENST00000412036 ZNF335Q9H4Z2 1342 aaPredicted RBP24.24■■□□□ 1.47
CXXC1-202ENST00000412036 C14orf37Q86TY3 774 aa24.24■■□□□ 1.47
CXXC1-202ENST00000412036 XIRP1Q702N8 1843 aaKnown RBP24.23■■□□□ 1.47
CXXC1-202ENST00000412036 ZNF692Q9BU19 519 aaPredicted RBP24.23■■□□□ 1.47
CXXC1-202ENST00000412036 ORAI2Q96SN7 254 aa24.22■■□□□ 1.47
CXXC1-202ENST00000412036 BLMP54132 1417 aaPredicted RBP24.22■■□□□ 1.47
CXXC1-202ENST00000412036 NGDNQ8NEJ9 315 aaKnown RBP24.21■■□□□ 1.47
CXXC1-202ENST00000412036 ZBED9Q6R2W3 1325 aa24.2■■□□□ 1.46
CXXC1-202ENST00000412036 SALL2Q9Y467 1007 aaPredicted RBP24.19■■□□□ 1.46
CXXC1-202ENST00000412036 COL3A1P02461 1466 aaPredicted RBP24.19■■□□□ 1.46
CXXC1-202ENST00000412036 POLKQ9UBT6 870 aa24.18■■□□□ 1.46
CXXC1-202ENST00000412036 PIK3C2AO00443 1686 aa24.18■■□□□ 1.46
CXXC1-202ENST00000412036 OVOS2A0A0J9YW53 1432 aa24.17■■□□□ 1.46
CXXC1-202ENST00000412036 OVOS2Q6IE36 1432 aa24.17■■□□□ 1.46
CXXC1-202ENST00000412036 MAP2P11137 1827 aaKnown RBP24.17■■□□□ 1.46
CXXC1-202ENST00000412036 ESCO1Q5FWF5 840 aa24.17■■□□□ 1.46
CXXC1-202ENST00000412036 PHF8Q9UPP1 1060 aa24.17■■□□□ 1.46
CXXC1-202ENST00000412036 CCDC146Q8IYE0 955 aa24.17■■□□□ 1.46
CXXC1-202ENST00000412036 EMILIN1Q9Y6C2 1016 aa24.17■■□□□ 1.46
CXXC1-202ENST00000412036 C19orf44Q9H6X5 657 aa24.16■■□□□ 1.46
CXXC1-202ENST00000412036 RRS1Q15050 365 aaKnown RBP24.15■■□□□ 1.46
CXXC1-202ENST00000412036 MARF1Q9Y4F3 1742 aaKnown RBP24.15■■□□□ 1.46
CXXC1-202ENST00000412036 WDR43Q15061 677 aaKnown RBP eCLIP24.14■■□□□ 1.452e-7■■■■□ 19.5
CXXC1-202ENST00000412036 LRRC7Q96NW7 1537 aa24.14■■□□□ 1.45
CXXC1-202ENST00000412036 C1orf167Q5SNV9 1468 aa24.14■■□□□ 1.45
CXXC1-202ENST00000412036 XPCQ01831 940 aaPredicted RBP24.13■■□□□ 1.45
CXXC1-202ENST00000412036 NUTM2GQ5VZR2 741 aa24.13■■□□□ 1.45
CXXC1-202ENST00000412036 COG3Q96JB2 828 aa24.13■■□□□ 1.45
CXXC1-202ENST00000412036 MST1RQ04912 1400 aa24.12■■□□□ 1.45
CXXC1-202ENST00000412036 GTF3C3Q9Y5Q9 886 aa24.12■■□□□ 1.45
CXXC1-202ENST00000412036 PNPLA6Q8IY17 1366 aa24.12■■□□□ 1.45
CXXC1-202ENST00000412036 FOXO3O43524 673 aa24.1■■□□□ 1.45
CXXC1-202ENST00000412036 DDX17Q92841 729 aaKnown RBP24.1■■□□□ 1.45
CXXC1-202ENST00000412036 PPM1GO15355 546 aaPredicted RBP24.1■■□□□ 1.45
CXXC1-202ENST00000412036 SOX12O15370 315 aa24.1■■□□□ 1.45
CXXC1-202ENST00000412036 INSRP06213 1382 aa24.09■■□□□ 1.45
CXXC1-202ENST00000412036 PEAK1Q9H792 1746 aa24.08■■□□□ 1.44
CXXC1-202ENST00000412036 AATKQ6ZMQ8 1374 aa24.07■■□□□ 1.44
CXXC1-202ENST00000412036 SMG6Q86US8 1419 aaKnown RBP24.07■■□□□ 1.44
CXXC1-202ENST00000412036 TTC21AQ8NDW8 1320 aa24.07■■□□□ 1.44
CXXC1-202ENST00000412036 USP31Q70CQ4 1352 aa24.07■■□□□ 1.44
CXXC1-202ENST00000412036 PAK3O75914 559 aaPredicted RBP24.06■■□□□ 1.44
CXXC1-202ENST00000412036 NCOA3Q9Y6Q9 1424 aa24.05■■□□□ 1.44
CXXC1-202ENST00000412036 APAF1O14727 1248 aa24.04■■□□□ 1.44
CXXC1-202ENST00000412036 ATF3P18847 181 aa24.04■■□□□ 1.44
CXXC1-202ENST00000412036 CDCA7LQ96GN5 454 aa24.04■■□□□ 1.44
CXXC1-202ENST00000412036 CFAP53Q96M91 514 aa24.03■■□□□ 1.44
CXXC1-202ENST00000412036 DCCP43146 1447 aa24.03■■□□□ 1.44
CXXC1-202ENST00000412036 NLRP6P59044 892 aa24.03■■□□□ 1.44
CXXC1-202ENST00000412036 ABTB2Q8N961 1025 aa24.02■■□□□ 1.44
CXXC1-202ENST00000412036 PSME1Q06323 249 aa24.01■■□□□ 1.43
CXXC1-202ENST00000412036 U2AF1L5P0DN76 240 aaPredicted RBP24.01■■□□□ 1.43
CXXC1-202ENST00000412036 U2AF1Q01081 240 aaKnown RBP eCLIP24.01■■□□□ 1.437e-6■■■■□ 20
CXXC1-202ENST00000412036 TRPM3Q9HCF6 1732 aaPredicted RBP24.01■■□□□ 1.43
CXXC1-202ENST00000412036 CDK12Q9NYV4 1490 aaPredicted RBP24■■□□□ 1.43
CXXC1-202ENST00000412036 U2SURPO15042 1029 aaKnown RBP24■■□□□ 1.43
CXXC1-202ENST00000412036 MSH6P52701 1360 aa23.99■■□□□ 1.43
CXXC1-202ENST00000412036 DMRT2Q9Y5R5 561 aa23.99■■□□□ 1.43
CXXC1-202ENST00000412036 USP54Q70EL1 1684 aa23.99■■□□□ 1.43
CXXC1-202ENST00000412036 MAP3K19Q56UN5 1328 aa23.99■■□□□ 1.43
CXXC1-202ENST00000412036 DIAPH1O60610 1272 aaKnown RBP23.99■■□□□ 1.43
CXXC1-202ENST00000412036 IL13P35225 146 aa23.99■■□□□ 1.43
CXXC1-202ENST00000412036 IQSEC2Q5JU85 1478 aa23.98■■□□□ 1.43
CXXC1-202ENST00000412036 ZNF521Q96K83 1311 aa23.98■■□□□ 1.43
CXXC1-202ENST00000412036 RRP7AQ9Y3A4 280 aaKnown RBP23.98■■□□□ 1.43
CXXC1-202ENST00000412036 HSP90AB2PQ58FF8 381 aa23.97■■□□□ 1.43
CXXC1-202ENST00000412036 CADPS2Q86UW7 1296 aa23.97■■□□□ 1.43
CXXC1-202ENST00000412036 PLEKHG5O94827 1062 aa23.96■■□□□ 1.43
CXXC1-202ENST00000412036 PLEKHF1Q96S99 279 aa23.96■■□□□ 1.43
CXXC1-202ENST00000412036 KIF1AQ12756 1690 aa23.95■■□□□ 1.43
CXXC1-202ENST00000412036 KRT28Q7Z3Y7 464 aa23.95■■□□□ 1.43
CXXC1-202ENST00000412036 SPINK5Q9NQ38 1064 aaPredicted RBP23.95■■□□□ 1.42
CXXC1-202ENST00000412036 BRINP3Q76B58 766 aa23.93■■□□□ 1.42
CXXC1-202ENST00000412036 TCP11L2Q8N4U5 519 aa23.93■■□□□ 1.42
CXXC1-202ENST00000412036 HMOX1P09601 288 aa23.92■■□□□ 1.42
CXXC1-202ENST00000412036 EIF4A2Q14240 407 aaKnown RBP23.92■■□□□ 1.42
CXXC1-202ENST00000412036 RUNDC1Q96C34 613 aa23.92■■□□□ 1.42
CXXC1-202ENST00000412036 NFAT5O94916 1531 aa23.92■■□□□ 1.42
CXXC1-202ENST00000412036 NEUROD2Q15784 382 aa23.91■■□□□ 1.42
CXXC1-202ENST00000412036 NUDCQ9Y266 331 aa23.91■■□□□ 1.42
CXXC1-202ENST00000412036 SUPT16HQ9Y5B9 1047 aaKnown RBP23.91■■□□□ 1.42
CXXC1-202ENST00000412036 ALS2Q96Q42 1657 aa23.9■■□□□ 1.42
CXXC1-202ENST00000412036 RSPH6AQ9H0K4 717 aa23.9■■□□□ 1.42
CXXC1-202ENST00000412036 PXDNQ92626 1479 aa23.89■■□□□ 1.41
CXXC1-202ENST00000412036 LTBP4Q8N2S1 1624 aa23.89■■□□□ 1.41
CXXC1-202ENST00000412036 AEBP1Q8IUX7 1158 aa23.89■■□□□ 1.41
CXXC1-202ENST00000412036 SLAIN2Q9P270 581 aa23.89■■□□□ 1.41
CXXC1-202ENST00000412036 LMOD2Q6P5Q4 547 aa23.88■■□□□ 1.41
CXXC1-202ENST00000412036 PHACTR3Q96KR7 559 aa23.87■■□□□ 1.41
CXXC1-202ENST00000412036 LTN1O94822 1766 aa23.86■■□□□ 1.41
CXXC1-202ENST00000412036 MED1Q15648 1581 aaPredicted RBP23.86■■□□□ 1.41
CXXC1-202ENST00000412036 SBNO1A3KN83 1393 aa23.86■■□□□ 1.41
CXXC1-202ENST00000412036 RGPD1P0DJD0 1748 aa23.86■■□□□ 1.41
CXXC1-202ENST00000412036 PRKAR2BP31323 418 aa23.85■■□□□ 1.41
CXXC1-202ENST00000412036 PHF23Q9BUL5 403 aaPredicted RBP23.85■■□□□ 1.41
CXXC1-202ENST00000412036 WWC1Q8IX03 1113 aa23.85■■□□□ 1.41
CXXC1-202ENST00000412036 HOXC9P31274 260 aa23.84■■□□□ 1.41
CXXC1-202ENST00000412036 SLIT3O75094 1523 aa23.84■■□□□ 1.41
CXXC1-202ENST00000412036 FLT4P35916 1363 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms