RNA–Protein interactions for RNA: ENST00000410092.7

SPIRE1-203, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-203ENST00000410092 CDK13Q14004 1512 aaKnown RBP29.54■■■□□ 2.32
SPIRE1-203ENST00000410092 KLHL34Q8N239 644 aa29.54■■■□□ 2.32
SPIRE1-203ENST00000410092 ERC1Q8IUD2 1116 aa29.54■■■□□ 2.32
SPIRE1-203ENST00000410092 LAMC3Q9Y6N6 1575 aa29.54■■■□□ 2.32
SPIRE1-203ENST00000410092 PSMA5P28066 241 aa29.54■■■□□ 2.32
SPIRE1-203ENST00000410092 TOM1L2Q6ZVM7 507 aa29.53■■■□□ 2.32
SPIRE1-203ENST00000410092 CABP4P57796 275 aa29.53■■■□□ 2.32
SPIRE1-203ENST00000410092 HDGFL1Q5TGJ6 251 aa29.53■■■□□ 2.32
SPIRE1-203ENST00000410092 ZNF530Q6P9A1 599 aaPredicted RBP29.52■■■□□ 2.32
SPIRE1-203ENST00000410092 CCDC141Q6ZP82 1450 aa29.52■■■□□ 2.32
SPIRE1-203ENST00000410092 GNAI2P04899 355 aa29.51■■■□□ 2.32
SPIRE1-203ENST00000410092 PDE3AQ14432 1141 aa29.5■■■□□ 2.31
SPIRE1-203ENST00000410092 FYB1O15117 783 aa29.5■■■□□ 2.31
SPIRE1-203ENST00000410092 MAGI1Q96QZ7 1491 aaPredicted RBP29.5■■■□□ 2.31
SPIRE1-203ENST00000410092 CT47B1P0C2W7 299 aaPredicted RBP29.5■■■□□ 2.31
SPIRE1-203ENST00000410092 HIP1O00291 1037 aa29.49■■■□□ 2.31
SPIRE1-203ENST00000410092 WDR63Q8IWG1 891 aa29.49■■■□□ 2.31
SPIRE1-203ENST00000410092 FAM177BA6PVY3 158 aa29.49■■■□□ 2.31
SPIRE1-203ENST00000410092 SLC4A2P04920 1241 aa29.49■■■□□ 2.31
SPIRE1-203ENST00000410092 GCC1Q96CN9 775 aa29.48■■■□□ 2.31
SPIRE1-203ENST00000410092 GSE1Q14687 1217 aa29.48■■■□□ 2.31
SPIRE1-203ENST00000410092 CCT4P50991 539 aaKnown RBP29.48■■■□□ 2.31
SPIRE1-203ENST00000410092 FANCIQ9NVI1 1328 aa29.47■■■□□ 2.31
SPIRE1-203ENST00000410092 NOB1Q9ULX3 412 aaKnown RBP29.47■■■□□ 2.31
SPIRE1-203ENST00000410092 PCMTD1Q96MG8 357 aaPredicted RBP29.46■■■□□ 2.31
SPIRE1-203ENST00000410092 TSR2Q969E8 191 aaKnown RBP29.46■■■□□ 2.31
SPIRE1-203ENST00000410092 ARHGEF11O15085 1522 aa29.46■■■□□ 2.31
SPIRE1-203ENST00000410092 PHF23Q9BUL5 403 aaPredicted RBP29.46■■■□□ 2.31
SPIRE1-203ENST00000410092 BRMS1Q9HCU9 246 aa29.46■■■□□ 2.31
SPIRE1-203ENST00000410092 CCDC73Q6ZRK6 1079 aa29.45■■■□□ 2.31
SPIRE1-203ENST00000410092 CCDC43Q96MW1 224 aaKnown RBP29.45■■■□□ 2.31
SPIRE1-203ENST00000410092 CD109Q6YHK3 1445 aa29.45■■■□□ 2.3
SPIRE1-203ENST00000410092 XBP1P17861 261 aa29.45■■■□□ 2.3
SPIRE1-203ENST00000410092 DNAJC2Q99543 621 aaKnown RBP29.45■■■□□ 2.3
SPIRE1-203ENST00000410092 SART3Q15020 963 aaKnown RBP29.44■■■□□ 2.3
SPIRE1-203ENST00000410092 IPO7O95373 1038 aaKnown RBP29.44■■■□□ 2.3
SPIRE1-203ENST00000410092 CWC22Q9HCG8 908 aaKnown RBP29.44■■■□□ 2.3
SPIRE1-203ENST00000410092 DDX54Q8TDD1 881 aaKnown RBP29.44■■■□□ 2.3
SPIRE1-203ENST00000410092 ZSCAN21Q9Y5A6 473 aaPredicted RBP29.44■■■□□ 2.3
SPIRE1-203ENST00000410092 PRDM11Q9NQV5 511 aa29.43■■■□□ 2.3
SPIRE1-203ENST00000410092 CUL7Q14999 1698 aa29.43■■■□□ 2.3
SPIRE1-203ENST00000410092 PRM3Q9NNZ6 103 aa29.43■■■□□ 2.3
SPIRE1-203ENST00000410092 ARID3AQ99856 593 aa29.42■■■□□ 2.3
SPIRE1-203ENST00000410092 CNNM1Q9NRU3 951 aa29.42■■■□□ 2.3
SPIRE1-203ENST00000410092 FOSBP53539 338 aa29.41■■■□□ 2.3
SPIRE1-203ENST00000410092 SRCIN1Q9C0H9 1055 aa29.41■■■□□ 2.3
SPIRE1-203ENST00000410092 CCDC158Q5M9N0 1113 aa29.41■■■□□ 2.3
SPIRE1-203ENST00000410092 SASS6Q6UVJ0 657 aa29.41■■■□□ 2.3
SPIRE1-203ENST00000410092 NUTM2BA6NNL0 878 aaPredicted RBP29.4■■■□□ 2.3
SPIRE1-203ENST00000410092 NUTM2EB1AL46 878 aaPredicted RBP29.4■■■□□ 2.3
SPIRE1-203ENST00000410092 NUTM2AQ8IVF1 878 aaPredicted RBP29.4■■■□□ 2.3
SPIRE1-203ENST00000410092 GNL3LQ9NVN8 582 aaKnown RBP29.4■■■□□ 2.3
SPIRE1-203ENST00000410092 NUDT16Q96DE0 195 aaKnown RBP29.4■■■□□ 2.3
SPIRE1-203ENST00000410092 PDZRN3Q9UPQ7 1066 aa29.39■■■□□ 2.3
SPIRE1-203ENST00000410092 CCDC61Q9Y6R9 512 aa29.39■■■□□ 2.3
SPIRE1-203ENST00000410092 FCHSD2O94868 740 aa29.38■■■□□ 2.29
SPIRE1-203ENST00000410092 SLC3A2P08195 630 aaKnown RBP29.38■■■□□ 2.29
SPIRE1-203ENST00000410092 TTC39AQ5SRH9 613 aa29.38■■■□□ 2.29
SPIRE1-203ENST00000410092 C1orf115Q9H7X2 142 aa29.38■■■□□ 2.29
SPIRE1-203ENST00000410092 NAIPQ13075 1403 aa29.38■■■□□ 2.29
SPIRE1-203ENST00000410092 CAMSAP2Q08AD1 1489 aa29.38■■■□□ 2.29
SPIRE1-203ENST00000410092 SAMD1Q6SPF0 538 aaPredicted RBP29.37■■■□□ 2.29
SPIRE1-203ENST00000410092 CCDC70Q6NSX1 233 aa29.37■■■□□ 2.29
SPIRE1-203ENST00000410092 RRS1Q15050 365 aaKnown RBP29.37■■■□□ 2.29
SPIRE1-203ENST00000410092 KIF14Q15058 1648 aa29.36■■■□□ 2.29
SPIRE1-203ENST00000410092 KCNH5Q8NCM2 988 aa29.35■■■□□ 2.29
SPIRE1-203ENST00000410092 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP29.35■■■□□ 2.29
SPIRE1-203ENST00000410092 GRIN2AQ12879 1464 aa29.34■■■□□ 2.29
SPIRE1-203ENST00000410092 PCF11O94913 1555 aaKnown RBP29.34■■■□□ 2.29
SPIRE1-203ENST00000410092 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.34■■■□□ 2.29
SPIRE1-203ENST00000410092 ADGRL1O94910 1474 aa29.34■■■□□ 2.29
SPIRE1-203ENST00000410092 NSD3Q9BZ95 1437 aa29.34■■■□□ 2.29
SPIRE1-203ENST00000410092 MCM2P49736 904 aa29.34■■■□□ 2.29
SPIRE1-203ENST00000410092 CCAR2Q8N163 923 aaKnown RBP29.34■■■□□ 2.29
SPIRE1-203ENST00000410092 BCAR3O75815 825 aa29.33■■■□□ 2.29
SPIRE1-203ENST00000410092 ATF7IPQ6VMQ6 1270 aa29.32■■■□□ 2.28
SPIRE1-203ENST00000410092 LRRCC1Q9C099 1032 aa29.32■■■□□ 2.28
SPIRE1-203ENST00000410092 PLB1Q6P1J6 1458 aa29.32■■■□□ 2.28
SPIRE1-203ENST00000410092 SF3B2Q13435 895 aaKnown RBP29.31■■■□□ 2.28
SPIRE1-203ENST00000410092 BTBD11A6QL63 1104 aa29.31■■■□□ 2.28
SPIRE1-203ENST00000410092 IKQ13123 557 aaPredicted RBP29.3■■■□□ 2.28
SPIRE1-203ENST00000410092 ZNF428Q96B54 188 aa29.3■■■□□ 2.28
SPIRE1-203ENST00000410092 MYL6BP14649 208 aa29.3■■■□□ 2.28
SPIRE1-203ENST00000410092 NFE2L2Q16236 605 aa29.29■■■□□ 2.28
SPIRE1-203ENST00000410092 RABEP1Q15276 862 aa29.28■■■□□ 2.28
SPIRE1-203ENST00000410092 MTMR7Q9Y216 660 aa29.28■■■□□ 2.28
SPIRE1-203ENST00000410092 NEK4P51957 841 aa29.28■■■□□ 2.28
SPIRE1-203ENST00000410092 XPCQ01831 940 aaPredicted RBP29.27■■■□□ 2.28
SPIRE1-203ENST00000410092 PDCP20941 246 aa29.27■■■□□ 2.28
SPIRE1-203ENST00000410092 MVPQ14764 893 aaKnown RBP29.27■■■□□ 2.28
SPIRE1-203ENST00000410092 CCDC57Q2TAC2 916 aa29.26■■■□□ 2.28
SPIRE1-203ENST00000410092 PTPN23Q9H3S7 1636 aa29.25■■■□□ 2.27
SPIRE1-203ENST00000410092 ABCC5O15440 1437 aa29.25■■■□□ 2.27
SPIRE1-203ENST00000410092 GNAT3A8MTJ3 354 aa29.25■■■□□ 2.27
SPIRE1-203ENST00000410092 OLFM4Q6UX06 510 aa29.25■■■□□ 2.27
SPIRE1-203ENST00000410092 NAT10Q9H0A0 1025 aaKnown RBP29.25■■■□□ 2.27
SPIRE1-203ENST00000410092 MPHOSPH8Q99549 860 aa29.24■■■□□ 2.27
SPIRE1-203ENST00000410092 SIL1Q9H173 461 aa29.24■■■□□ 2.27
SPIRE1-203ENST00000410092 ZC3H6P61129 1189 aaKnown RBP29.24■■■□□ 2.27
SPIRE1-203ENST00000410092 NACAP1Q9BZK3 213 aa29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms