RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 TJAP1Q5JTD0 557 aa9.55□□□□□ -0.88
LSM5-206ENST00000409987 ZNF516Q92618 1163 aa9.55□□□□□ -0.88
LSM5-206ENST00000409987 CTHP32929 405 aa9.54□□□□□ -0.88
LSM5-206ENST00000409987 NUDT12Q9BQG2 462 aa9.54□□□□□ -0.88
LSM5-206ENST00000409987 EVA1BQ9NVM1 165 aa9.54□□□□□ -0.88
LSM5-206ENST00000409987 FBXO45P0C2W1 286 aa9.53□□□□□ -0.88
LSM5-206ENST00000409987 NR1H3Q13133 447 aa9.53□□□□□ -0.88
LSM5-206ENST00000409987 IL21Q9HBE4 155 aa9.53□□□□□ -0.88
LSM5-206ENST00000409987 SOX11P35716 441 aa9.52□□□□□ -0.89
LSM5-206ENST00000409987 KCNH2Q12809 1159 aa9.52□□□□□ -0.89
LSM5-206ENST00000409987 ZC3H4Q9UPT8 1303 aaKnown RBP9.52□□□□□ -0.89
LSM5-206ENST00000409987 ZBBXA8MT70 800 aa9.51□□□□□ -0.89
LSM5-206ENST00000409987 MYT1LQ9UL68 1186 aa9.51□□□□□ -0.89
LSM5-206ENST00000409987 CFAP70Q5T0N1 1121 aa9.5□□□□□ -0.89
LSM5-206ENST00000409987 UCN2Q96RP3 112 aa9.5□□□□□ -0.89
LSM5-206ENST00000409987 EIF4G2P78344 907 aaKnown RBP eCLIP9.49□□□□□ -0.89
LSM5-206ENST00000409987 SEMA3FQ13275 785 aa9.49□□□□□ -0.89
LSM5-206ENST00000409987 NKX2-3Q8TAU0 364 aa9.49□□□□□ -0.89
LSM5-206ENST00000409987 PPP1R12CQ9BZL4 782 aa9.49□□□□□ -0.89
LSM5-206ENST00000409987 SLC6A16Q9GZN6 736 aa9.49□□□□□ -0.89
LSM5-206ENST00000409987 PTCRAQ6ISU1 281 aaPredicted RBP9.48□□□□□ -0.89
LSM5-206ENST00000409987 RNF166Q96A37 237 aaPredicted RBP9.48□□□□□ -0.89
LSM5-206ENST00000409987 ARMC2Q8NEN0 867 aa9.47□□□□□ -0.89
LSM5-206ENST00000409987 OCSTAMPQ9BR26 566 aa9.47□□□□□ -0.89
LSM5-206ENST00000409987 PALM3A6NDB9 673 aaPredicted RBP9.46□□□□□ -0.9
LSM5-206ENST00000409987 PPP1R15AO75807 674 aaPredicted RBP9.46□□□□□ -0.9
LSM5-206ENST00000409987 RFX1P22670 979 aa9.46□□□□□ -0.9
LSM5-206ENST00000409987 PDXDC2PQ6P474 469 aa9.46□□□□□ -0.9
LSM5-206ENST00000409987 CCDC24Q8N4L8 307 aa9.46□□□□□ -0.9
LSM5-206ENST00000409987 GPKOWQ92917 476 aaPredicted RBP eCLIP9.46□□□□□ -0.9
LSM5-206ENST00000409987 UNC93B1Q9H1C4 597 aa9.46□□□□□ -0.9
LSM5-206ENST00000409987 S1PR4O95977 384 aa9.45□□□□□ -0.9
LSM5-206ENST00000409987 TFIP11Q9UBB9 837 aaKnown RBP9.45□□□□□ -0.9
LSM5-206ENST00000409987 GPSM3Q9Y4H4 160 aa9.45□□□□□ -0.9
LSM5-206ENST00000409987 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.44□□□□□ -0.9
LSM5-206ENST00000409987 SRPK2P78362 688 aaKnown RBP9.44□□□□□ -0.9
LSM5-206ENST00000409987 PTK2Q05397 1052 aa9.44□□□□□ -0.9
LSM5-206ENST00000409987 NBPF14Q5TI25 921 aa9.44□□□□□ -0.9
LSM5-206ENST00000409987 RETREG2Q8NC44 543 aa9.44□□□□□ -0.9
LSM5-206ENST00000409987 PDIA4P13667 645 aaKnown RBP9.43□□□□□ -0.9
LSM5-206ENST00000409987 TBC1D9Q6ZT07 1266 aa9.43□□□□□ -0.9
LSM5-206ENST00000409987 PBXIP1Q96AQ6 731 aa9.43□□□□□ -0.9
LSM5-206ENST00000409987 PIK3CDO00329 1044 aa9.42□□□□□ -0.9
LSM5-206ENST00000409987 LMOD1P29536 600 aaPredicted RBP9.42□□□□□ -0.9
LSM5-206ENST00000409987 FCF1Q9Y324 198 aaKnown RBP9.42□□□□□ -0.9
LSM5-206ENST00000409987 SH3BP5LQ7L8J4 393 aa9.41□□□□□ -0.9
LSM5-206ENST00000409987 MAFBQ9Y5Q3 323 aaPredicted RBP9.41□□□□□ -0.9
LSM5-206ENST00000409987 ATP9BO43861 1147 aa9.4□□□□□ -0.9
LSM5-206ENST00000409987 ADAM32Q8TC27 787 aa9.4□□□□□ -0.9
LSM5-206ENST00000409987 ARHGAP9Q9BRR9 750 aa9.4□□□□□ -0.9
LSM5-206ENST00000409987 TRIM26Q12899 539 aaPredicted RBP9.39□□□□□ -0.91
LSM5-206ENST00000409987 BAP1Q92560 729 aa9.39□□□□□ -0.91
LSM5-206ENST00000409987 HCSTQ9UBK5 93 aa9.39□□□□□ -0.91
LSM5-206ENST00000409987 ITGBL1O95965 494 aaPredicted RBP9.38□□□□□ -0.91
LSM5-206ENST00000409987 FAM174AQ8TBP5 190 aa9.38□□□□□ -0.91
LSM5-206ENST00000409987 TRAIPQ9BWF2 469 aa9.38□□□□□ -0.91
LSM5-206ENST00000409987 CEP126Q9P2H0 1117 aa9.38□□□□□ -0.91
LSM5-206ENST00000409987 PCDHB9Q9Y5E1 797 aa9.38□□□□□ -0.91
LSM5-206ENST00000409987 ACIN1Q9UKV3 1341 aaKnown RBP9.37□□□□□ -0.91
LSM5-206ENST00000409987 PPEF1O14829 653 aaPredicted RBP9.37□□□□□ -0.91
LSM5-206ENST00000409987 KCNC4Q03721 635 aa9.37□□□□□ -0.91
LSM5-206ENST00000409987 LINC01559Q495D7 138 aa9.37□□□□□ -0.91
LSM5-206ENST00000409987 SH3RF1Q7Z6J0 888 aa9.37□□□□□ -0.91
LSM5-206ENST00000409987 NFATC2IPQ8NCF5 419 aa9.37□□□□□ -0.91
LSM5-206ENST00000409987 CDCA8Q53HL2 280 aa9.36□□□□□ -0.91
LSM5-206ENST00000409987 ZBTB33Q86T24 672 aa9.36□□□□□ -0.91
LSM5-206ENST00000409987 ZNF511Q8NB15 262 aa9.36□□□□□ -0.91
LSM5-206ENST00000409987 FOXJ1Q92949 421 aa9.36□□□□□ -0.91
LSM5-206ENST00000409987 CARD14Q9BXL6 1004 aa9.36□□□□□ -0.91
LSM5-206ENST00000409987 MAGEB6P1A0A0J9YX57 407 aa9.35□□□□□ -0.91
LSM5-206ENST00000409987 SKIP12755 728 aa9.35□□□□□ -0.91
LSM5-206ENST00000409987 MCCD1P59942 119 aaPredicted RBP9.35□□□□□ -0.91
LSM5-206ENST00000409987 C4orf48Q5BLP8 95 aa9.35□□□□□ -0.91
LSM5-206ENST00000409987 PHTF2Q8N3S3 785 aa9.35□□□□□ -0.91
LSM5-206ENST00000409987 ZNF592Q92610 1267 aa9.35□□□□□ -0.91
LSM5-206ENST00000409987 RNF223E7ERA6 249 aa9.34□□□□□ -0.91
LSM5-206ENST00000409987 USP17L3A6NCW0 530 aa9.33□□□□□ -0.92
LSM5-206ENST00000409987 USP17L4A6NCW7 530 aa9.33□□□□□ -0.92
LSM5-206ENST00000409987 USP17L5A8MUK1 530 aa9.33□□□□□ -0.92
LSM5-206ENST00000409987 SLFNL1Q499Z3 407 aa9.33□□□□□ -0.92
LSM5-206ENST00000409987 ERFEQ4G0M1 354 aa9.33□□□□□ -0.92
LSM5-206ENST00000409987 PLA2G2CQ5R387 149 aa9.33□□□□□ -0.92
LSM5-206ENST00000409987 KANK4Q5T7N3 995 aaPredicted RBP9.33□□□□□ -0.92
LSM5-206ENST00000409987 USP17L2Q6R6M4 530 aa9.33□□□□□ -0.92
LSM5-206ENST00000409987 USP17L1Q7RTZ2 530 aa9.33□□□□□ -0.92
LSM5-206ENST00000409987 BPHLQ86WA6 291 aaPredicted RBP9.33□□□□□ -0.92
LSM5-206ENST00000409987 SH3BP2P78314 561 aa9.32□□□□□ -0.92
LSM5-206ENST00000409987 AGERQ15109 404 aa9.32□□□□□ -0.92
LSM5-206ENST00000409987 DZIP3Q86Y13 1208 aaKnown RBP9.32□□□□□ -0.92
LSM5-206ENST00000409987 RNF135Q8IUD6 432 aa9.32□□□□□ -0.92
LSM5-206ENST00000409987 PLEKHM2Q8IWE5 1019 aa9.32□□□□□ -0.92
LSM5-206ENST00000409987 ATG7O95352 703 aa9.31□□□□□ -0.92
LSM5-206ENST00000409987 DEPDC4Q8N2C3 294 aa9.31□□□□□ -0.92
LSM5-206ENST00000409987 C1QTNF2Q9BXJ5 285 aa9.31□□□□□ -0.92
LSM5-206ENST00000409987 ANKLE1Q8NAG6 615 aa9.3□□□□□ -0.92
LSM5-206ENST00000409987 PLPP7Q8NBV4 271 aa9.3□□□□□ -0.92
LSM5-206ENST00000409987 VRTNQ9H8Y1 702 aa9.3□□□□□ -0.92
LSM5-206ENST00000409987 CHIC2Q9UKJ5 165 aa9.3□□□□□ -0.92
LSM5-206ENST00000409987 CSB-PGBD3P0DP91 1061 aa9.29□□□□□ -0.92
LSM5-206ENST00000409987 TSGA10IPQ3SY00 556 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms