RNA–Protein interactions for RNA: ENST00000409960.6

SERF2-210, Transcript of small EDRK-rich factor 2, humanhuman

TSL 1 (best) BASIC

Gene SERF2, Length 1,032 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF2-210ENST00000409960 TULP4Q9NRJ4 1543 aa17.26■□□□□ 0.35
SERF2-210ENST00000409960 RNF39Q9H2S5 420 aa17.26■□□□□ 0.35
SERF2-210ENST00000409960 TRAK1Q9UPV9 953 aa17.26■□□□□ 0.35
SERF2-210ENST00000409960 TRPM3Q9HCF6 1732 aaPredicted RBP17.26■□□□□ 0.35
SERF2-210ENST00000409960 DCAF11Q8TEB1 546 aa17.25■□□□□ 0.35
SERF2-210ENST00000409960 ALS2Q96Q42 1657 aa17.24■□□□□ 0.35
SERF2-210ENST00000409960 KRT27Q7Z3Y8 459 aa17.24■□□□□ 0.35
SERF2-210ENST00000409960 COL14A1Q05707 1796 aaKnown RBP17.24■□□□□ 0.35
SERF2-210ENST00000409960 FAM83GA6ND36 823 aa17.23■□□□□ 0.35
SERF2-210ENST00000409960 WASLO00401 505 aaPredicted RBP17.23■□□□□ 0.35
SERF2-210ENST00000409960 PLEKHG5O94827 1062 aa17.23■□□□□ 0.35
SERF2-210ENST00000409960 MYCNP04198 464 aaPredicted RBP17.23■□□□□ 0.35
SERF2-210ENST00000409960 HRCP23327 699 aa17.23■□□□□ 0.35
SERF2-210ENST00000409960 HIRIP3Q9BW71 556 aaPredicted RBP17.23■□□□□ 0.35
SERF2-210ENST00000409960 MINK1Q8N4C8 1332 aaPredicted RBP17.22■□□□□ 0.35
SERF2-210ENST00000409960 ITSN1Q15811 1721 aa17.22■□□□□ 0.35
SERF2-210ENST00000409960 NRAPQ86VF7 1730 aa17.22■□□□□ 0.35
SERF2-210ENST00000409960 KDM2AQ9Y2K7 1162 aa17.22■□□□□ 0.35
SERF2-210ENST00000409960 NGDNQ8NEJ9 315 aaKnown RBP17.21■□□□□ 0.35
SERF2-210ENST00000409960 A0A0G2JS52 829 aa17.2■□□□□ 0.34
SERF2-210ENST00000409960 MYT1Q01538 1121 aa17.2■□□□□ 0.34
SERF2-210ENST00000409960 BTG4Q9NY30 223 aa17.2■□□□□ 0.34
SERF2-210ENST00000409960 PRR36Q9H6K5 1346 aa17.2■□□□□ 0.34
SERF2-210ENST00000409960 ARHGEF28Q8N1W1 1705 aaKnown RBP17.19■□□□□ 0.34
SERF2-210ENST00000409960 DEFB132Q7Z7B7 95 aa17.18■□□□□ 0.34
SERF2-210ENST00000409960 PAK3O75914 559 aaPredicted RBP17.17■□□□□ 0.34
SERF2-210ENST00000409960 BAG6P46379 1132 aa17.17■□□□□ 0.34
SERF2-210ENST00000409960 FAM98CQ17RN3 349 aaKnown RBP17.17■□□□□ 0.34
SERF2-210ENST00000409960 CRYBG1Q9Y4K1 1723 aa17.17■□□□□ 0.34
SERF2-210ENST00000409960 PRDM11Q9NQV5 511 aa17.16■□□□□ 0.34
SERF2-210ENST00000409960 ATP7BP35670 1465 aa17.16■□□□□ 0.34
SERF2-210ENST00000409960 SPATA31A5Q5VU36 1347 aa17.15■□□□□ 0.34
SERF2-210ENST00000409960 SPATA31A7Q8IWB4 1347 aa17.15■□□□□ 0.34
SERF2-210ENST00000409960 RGPD1P0DJD0 1748 aa17.14■□□□□ 0.33
SERF2-210ENST00000409960 NUDT16Q96DE0 195 aaKnown RBP17.14■□□□□ 0.33
SERF2-210ENST00000409960 KIAA1210Q9ULL0 1709 aa17.13■□□□□ 0.33
SERF2-210ENST00000409960 LRP5O75197 1615 aa17.12■□□□□ 0.33
SERF2-210ENST00000409960 THSD7AQ9UPZ6 1657 aa17.11■□□□□ 0.33
SERF2-210ENST00000409960 POLR3AO14802 1390 aaPredicted RBP17.11■□□□□ 0.33
SERF2-210ENST00000409960 PHRF1Q9P1Y6 1649 aaKnown RBP17.1■□□□□ 0.33
SERF2-210ENST00000409960 TOPAZ1Q8N9V7 1692 aa17.1■□□□□ 0.33
SERF2-210ENST00000409960 CDK19Q9BWU1 502 aa17.1■□□□□ 0.33
SERF2-210ENST00000409960 CCDC61Q9Y6R9 512 aa17.1■□□□□ 0.33
SERF2-210ENST00000409960 KIAA0232Q92628 1395 aa17.09■□□□□ 0.33
SERF2-210ENST00000409960 DISP2A7MBM2 1401 aa17.09■□□□□ 0.33
SERF2-210ENST00000409960 SPATA31A1Q5TZJ5 1347 aa17.08■□□□□ 0.32
SERF2-210ENST00000409960 PLEKHG3A1L390 1219 aa17.07■□□□□ 0.32
SERF2-210ENST00000409960 ACEP12821 1306 aa17.06■□□□□ 0.32
SERF2-210ENST00000409960 NBPF8Q3BBV2 869 aa17.06■□□□□ 0.32
SERF2-210ENST00000409960 C1QBPQ07021 282 aaKnown RBP17.05■□□□□ 0.32
SERF2-210ENST00000409960 FAM196AQ6ZSG2 479 aa17.05■□□□□ 0.32
SERF2-210ENST00000409960 STRN4Q9NRL3 753 aa17.05■□□□□ 0.32
SERF2-210ENST00000409960 TNS1Q9HBL0 1735 aaKnown RBP17.04■□□□□ 0.32
SERF2-210ENST00000409960 BRD4O60885 1362 aaPredicted RBP17.04■□□□□ 0.32
SERF2-210ENST00000409960 EVA1CP58658 441 aa17.04■□□□□ 0.32
SERF2-210ENST00000409960 ZC3H6P61129 1189 aaKnown RBP17.04■□□□□ 0.32
SERF2-210ENST00000409960 EN1Q05925 392 aaPredicted RBP17.04■□□□□ 0.32
SERF2-210ENST00000409960 CHRNA2Q15822 529 aa17.04■□□□□ 0.32
SERF2-210ENST00000409960 ABTB2Q8N961 1025 aa17.04■□□□□ 0.32
SERF2-210ENST00000409960 CPDO75976 1380 aa17.03■□□□□ 0.32
SERF2-210ENST00000409960 NRKQ7Z2Y5 1582 aa17.03■□□□□ 0.32
SERF2-210ENST00000409960 BARGINQ6ZT62 677 aa17.03■□□□□ 0.32
SERF2-210ENST00000409960 SSH2Q76I76 1423 aa17.03■□□□□ 0.32
SERF2-210ENST00000409960 PARD3Q8TEW0 1356 aa17.02■□□□□ 0.32
SERF2-210ENST00000409960 PSDA5PKW4 1024 aaPredicted RBP17.02■□□□□ 0.32
SERF2-210ENST00000409960 FAM182BQ5T319 152 aa17.02■□□□□ 0.32
SERF2-210ENST00000409960 NLRP13Q86W25 1043 aa17.02■□□□□ 0.32
SERF2-210ENST00000409960 USP19O94966 1318 aa17.01■□□□□ 0.31
SERF2-210ENST00000409960 CENPJQ9HC77 1338 aaPredicted RBP17.01■□□□□ 0.31
SERF2-210ENST00000409960 SRPK2P78362 688 aaKnown RBP17.01■□□□□ 0.31
SERF2-210ENST00000409960 NUTM2GQ5VZR2 741 aa17.01■□□□□ 0.31
SERF2-210ENST00000409960 PDE3BQ13370 1112 aa17■□□□□ 0.31
SERF2-210ENST00000409960 PPIP5K1Q6PFW1 1433 aa17■□□□□ 0.31
SERF2-210ENST00000409960 THRAP3Q9Y2W1 955 aaKnown RBP17■□□□□ 0.31
SERF2-210ENST00000409960 LMO7Q8WWI1 1683 aa17■□□□□ 0.31
SERF2-210ENST00000409960 C11orf95C9JLR9 678 aaPredicted RBP16.99■□□□□ 0.31
SERF2-210ENST00000409960 NBPF1Q3BBV0 1214 aa16.99■□□□□ 0.31
SERF2-210ENST00000409960 SAMD1Q6SPF0 538 aaPredicted RBP16.99■□□□□ 0.31
SERF2-210ENST00000409960 TCP11L2Q8N4U5 519 aa16.99■□□□□ 0.31
SERF2-210ENST00000409960 USP35Q9P2H5 1018 aa16.99■□□□□ 0.31
SERF2-210ENST00000409960 CAMTA1Q9Y6Y1 1673 aa16.98■□□□□ 0.31
SERF2-210ENST00000409960 TRIM37O94972 964 aa16.98■□□□□ 0.31
SERF2-210ENST00000409960 QRICH2Q9H0J4 1663 aa16.97■□□□□ 0.31
SERF2-210ENST00000409960 GCP02774 474 aa16.97■□□□□ 0.31
SERF2-210ENST00000409960 EZH2Q15910 746 aaKnown RBP16.97■□□□□ 0.31
SERF2-210ENST00000409960 CAMKK2Q96RR4 588 aa16.97■□□□□ 0.31
SERF2-210ENST00000409960 APBA3O96018 575 aa16.96■□□□□ 0.31
SERF2-210ENST00000409960 R3HDM1Q15032 1099 aaKnown RBP16.96■□□□□ 0.31
SERF2-210ENST00000409960 LARP1Q6PKG0 1096 aaKnown RBP16.96■□□□□ 0.31
SERF2-210ENST00000409960 COL5A2P05997 1499 aaPredicted RBP16.94■□□□□ 0.3
SERF2-210ENST00000409960 PARP4Q9UKK3 1724 aaKnown RBP16.94■□□□□ 0.3
SERF2-210ENST00000409960 CABP2Q9NPB3 220 aa16.94■□□□□ 0.3
SERF2-210ENST00000409960 USP6P35125 1406 aa16.94■□□□□ 0.3
SERF2-210ENST00000409960 RREB1Q92766 1687 aa16.93■□□□□ 0.3
SERF2-210ENST00000409960 CRB1P82279 1406 aa16.93■□□□□ 0.3
SERF2-210ENST00000409960 NLRP6P59044 892 aa16.92■□□□□ 0.3
SERF2-210ENST00000409960 NBPF14Q5TI25 921 aa16.92■□□□□ 0.3
SERF2-210ENST00000409960 EVC2Q86UK5 1308 aa16.92■□□□□ 0.3
SERF2-210ENST00000409960 SLIT3O75094 1523 aa16.91■□□□□ 0.3
SERF2-210ENST00000409960 AATKQ6ZMQ8 1374 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms