RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 PRDM11Q9NQV5 511 aa20.85■□□□□ 0.93
MCF2L-210ENST00000409954 ZRANB1Q9UGI0 708 aa20.85■□□□□ 0.93
MCF2L-210ENST00000409954 NEUROD1Q13562 356 aa20.84■□□□□ 0.93
MCF2L-210ENST00000409954 ATP7BP35670 1465 aa20.83■□□□□ 0.93
MCF2L-210ENST00000409954 SF3B2Q13435 895 aaKnown RBP20.83■□□□□ 0.93
MCF2L-210ENST00000409954 KIAA1210Q9ULL0 1709 aa20.83■□□□□ 0.92
MCF2L-210ENST00000409954 GLI3P10071 1580 aa20.82■□□□□ 0.92
MCF2L-210ENST00000409954 ABTB2Q8N961 1025 aa20.82■□□□□ 0.92
MCF2L-210ENST00000409954 FAM98CQ17RN3 349 aaKnown RBP20.81■□□□□ 0.92
MCF2L-210ENST00000409954 NLRP13Q86W25 1043 aa20.81■□□□□ 0.92
MCF2L-210ENST00000409954 CABP2Q9NPB3 220 aa20.81■□□□□ 0.92
MCF2L-210ENST00000409954 A0A0G2JS52 829 aa20.8■□□□□ 0.92
MCF2L-210ENST00000409954 MYT1Q01538 1121 aa20.8■□□□□ 0.92
MCF2L-210ENST00000409954 ARHGEF28Q8N1W1 1705 aaKnown RBP20.8■□□□□ 0.92
MCF2L-210ENST00000409954 TRPM3Q9HCF6 1732 aaPredicted RBP20.8■□□□□ 0.92
MCF2L-210ENST00000409954 BRD4O60885 1362 aaPredicted RBP20.8■□□□□ 0.92
MCF2L-210ENST00000409954 SPATA31A5Q5VU36 1347 aa20.79■□□□□ 0.92
MCF2L-210ENST00000409954 SPATA31A7Q8IWB4 1347 aa20.79■□□□□ 0.92
MCF2L-210ENST00000409954 BLMP54132 1417 aaPredicted RBP20.79■□□□□ 0.92
MCF2L-210ENST00000409954 ZC3H6P61129 1189 aaKnown RBP20.79■□□□□ 0.92
MCF2L-210ENST00000409954 NUTM2GQ5VZR2 741 aa20.79■□□□□ 0.92
MCF2L-210ENST00000409954 NWD2Q9ULI1 1742 aa20.78■□□□□ 0.92
MCF2L-210ENST00000409954 CABP1Q9NZU7 370 aa20.78■□□□□ 0.92
MCF2L-210ENST00000409954 EVC2Q86UK5 1308 aa20.78■□□□□ 0.92
MCF2L-210ENST00000409954 ALS2Q96Q42 1657 aa20.77■□□□□ 0.92
MCF2L-210ENST00000409954 EVA1CP58658 441 aa20.77■□□□□ 0.92
MCF2L-210ENST00000409954 KIAA0232Q92628 1395 aa20.76■□□□□ 0.91
MCF2L-210ENST00000409954 CHRNA2Q15822 529 aa20.76■□□□□ 0.91
MCF2L-210ENST00000409954 ZNF692Q9BU19 519 aaPredicted RBP20.75■□□□□ 0.91
MCF2L-210ENST00000409954 GCP02774 474 aa20.74■□□□□ 0.91
MCF2L-210ENST00000409954 PPIP5K1Q6PFW1 1433 aa20.74■□□□□ 0.91
MCF2L-210ENST00000409954 COL14A1Q05707 1796 aaKnown RBP20.74■□□□□ 0.91
MCF2L-210ENST00000409954 ITSN1Q15811 1721 aa20.73■□□□□ 0.91
MCF2L-210ENST00000409954 STRN4Q9NRL3 753 aa20.73■□□□□ 0.91
MCF2L-210ENST00000409954 SPATA31A1Q5TZJ5 1347 aa20.73■□□□□ 0.91
MCF2L-210ENST00000409954 ROCK2O75116 1388 aaKnown RBP20.72■□□□□ 0.91
MCF2L-210ENST00000409954 PLCH1Q4KWH8 1693 aa20.71■□□□□ 0.91
MCF2L-210ENST00000409954 ABCA3Q99758 1704 aa20.71■□□□□ 0.91
MCF2L-210ENST00000409954 NLRP6P59044 892 aa20.71■□□□□ 0.91
MCF2L-210ENST00000409954 DEFB132Q7Z7B7 95 aa20.71■□□□□ 0.91
MCF2L-210ENST00000409954 USP19O94966 1318 aa20.71■□□□□ 0.91
MCF2L-210ENST00000409954 BAG6P46379 1132 aa20.7■□□□□ 0.9
MCF2L-210ENST00000409954 CPDO75976 1380 aa20.7■□□□□ 0.9
MCF2L-210ENST00000409954 BARGINQ6ZT62 677 aa20.69■□□□□ 0.9
MCF2L-210ENST00000409954 FAM196AQ6ZSG2 479 aa20.67■□□□□ 0.9
MCF2L-210ENST00000409954 THRAP3Q9Y2W1 955 aaKnown RBP20.67■□□□□ 0.9
MCF2L-210ENST00000409954 USP6P35125 1406 aa20.65■□□□□ 0.9
MCF2L-210ENST00000409954 PDE3BQ13370 1112 aa20.65■□□□□ 0.9
MCF2L-210ENST00000409954 TCP11L2Q8N4U5 519 aa20.65■□□□□ 0.9
MCF2L-210ENST00000409954 CARD11Q9BXL7 1154 aa20.65■□□□□ 0.9
MCF2L-210ENST00000409954 USP35Q9P2H5 1018 aa20.65■□□□□ 0.9
MCF2L-210ENST00000409954 LARP1Q6PKG0 1096 aaKnown RBP20.64■□□□□ 0.89
MCF2L-210ENST00000409954 TOPAZ1Q8N9V7 1692 aa20.64■□□□□ 0.89
MCF2L-210ENST00000409954 BRWD3Q6RI45 1802 aa20.63■□□□□ 0.89
MCF2L-210ENST00000409954 KCNH5Q8NCM2 988 aa20.63■□□□□ 0.89
MCF2L-210ENST00000409954 NRAPQ86VF7 1730 aa20.63■□□□□ 0.89
MCF2L-210ENST00000409954 FAM182BQ5T319 152 aa20.62■□□□□ 0.89
MCF2L-210ENST00000409954 SSH2Q76I76 1423 aa20.61■□□□□ 0.89
MCF2L-210ENST00000409954 CRYBG1Q9Y4K1 1723 aa20.61■□□□□ 0.89
MCF2L-210ENST00000409954 TTC21BQ7Z4L5 1316 aa20.61■□□□□ 0.89
MCF2L-210ENST00000409954 TTC21AQ8NDW8 1320 aa20.61■□□□□ 0.89
MCF2L-210ENST00000409954 C11orf95C9JLR9 678 aaPredicted RBP20.61■□□□□ 0.89
MCF2L-210ENST00000409954 TRIM26Q12899 539 aaPredicted RBP20.6■□□□□ 0.89
MCF2L-210ENST00000409954 AATKQ6ZMQ8 1374 aa20.59■□□□□ 0.89
MCF2L-210ENST00000409954 TONSLQ96HA7 1378 aa20.59■□□□□ 0.89
MCF2L-210ENST00000409954 EP400Q96L91 3159 aa20.59■□□□□ 0.89
MCF2L-210ENST00000409954 CAMTA1Q9Y6Y1 1673 aa20.59■□□□□ 0.89
MCF2L-210ENST00000409954 SLC24A1O60721 1099 aa20.59■□□□□ 0.89
MCF2L-210ENST00000409954 EN1Q05925 392 aaPredicted RBP20.59■□□□□ 0.89
MCF2L-210ENST00000409954 TRPM1Q7Z4N2 1603 aa20.59■□□□□ 0.89
MCF2L-210ENST00000409954 ZBTB7CA1YPR0 619 aa20.58■□□□□ 0.89
MCF2L-210ENST00000409954 PUS7Q96PZ0 661 aaKnown RBP20.58■□□□□ 0.89
MCF2L-210ENST00000409954 SBNO2Q9Y2G9 1366 aa20.58■□□□□ 0.88
MCF2L-210ENST00000409954 QRICH2Q9H0J4 1663 aa20.58■□□□□ 0.88
MCF2L-210ENST00000409954 PHRF1Q9P1Y6 1649 aaKnown RBP20.56■□□□□ 0.88
MCF2L-210ENST00000409954 TRIM37O94972 964 aa20.56■□□□□ 0.88
MCF2L-210ENST00000409954 ARHGEF25Q86VW2 580 aa20.56■□□□□ 0.88
MCF2L-210ENST00000409954 CPSF1Q10570 1443 aaKnown RBP20.55■□□□□ 0.88
MCF2L-210ENST00000409954 KTN1Q86UP2 1357 aaKnown RBP20.55■□□□□ 0.88
MCF2L-210ENST00000409954 APBA3O96018 575 aa20.54■□□□□ 0.88
MCF2L-210ENST00000409954 TOM1L2Q6ZVM7 507 aa20.54■□□□□ 0.88
MCF2L-210ENST00000409954 HDGFL2Q7Z4V5 671 aaPredicted RBP20.53■□□□□ 0.88
MCF2L-210ENST00000409954 TMC1Q8TDI8 760 aa20.53■□□□□ 0.88
MCF2L-210ENST00000409954 CAMKK2Q96RR4 588 aa20.53■□□□□ 0.88
MCF2L-210ENST00000409954 AXIN2Q9Y2T1 843 aa20.53■□□□□ 0.88
MCF2L-210ENST00000409954 NRKQ7Z2Y5 1582 aa20.53■□□□□ 0.88
MCF2L-210ENST00000409954 THSD7AQ9UPZ6 1657 aa20.53■□□□□ 0.88
MCF2L-210ENST00000409954 CRB1P82279 1406 aa20.53■□□□□ 0.88
MCF2L-210ENST00000409954 CDCA7Q9BWT1 371 aaPredicted RBP20.52■□□□□ 0.88
MCF2L-210ENST00000409954 DISP2A7MBM2 1401 aa20.52■□□□□ 0.87
MCF2L-210ENST00000409954 COL5A2P05997 1499 aaPredicted RBP20.51■□□□□ 0.87
MCF2L-210ENST00000409954 EZH2Q15910 746 aaKnown RBP20.51■□□□□ 0.87
MCF2L-210ENST00000409954 TERF2IPQ9NYB0 399 aa20.51■□□□□ 0.87
MCF2L-210ENST00000409954 SLIT3O75094 1523 aa20.5■□□□□ 0.87
MCF2L-210ENST00000409954 SLC12A5Q9H2X9 1139 aa20.5■□□□□ 0.87
MCF2L-210ENST00000409954 WDR17Q8IZU2 1322 aa20.5■□□□□ 0.87
MCF2L-210ENST00000409954 LMO7Q8WWI1 1683 aa20.49■□□□□ 0.87
MCF2L-210ENST00000409954 DDB1Q16531 1140 aa20.49■□□□□ 0.87
MCF2L-210ENST00000409954 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.49■□□□□ 0.87
MCF2L-210ENST00000409954 CARD10Q9BWT7 1032 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms