RNA–Protein interactions for RNA: ENST00000409760.1

VAMP8-202, Transcript of vesicle associated membrane protein 8, humanhuman

TSL 3 BASIC

Gene VAMP8, Length 805 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP8-202ENST00000409760 COL14A1Q05707 1796 aaKnown RBP13.73□□□□□ -0.21
VAMP8-202ENST00000409760 KIAA1210Q9ULL0 1709 aa13.73□□□□□ -0.21
VAMP8-202ENST00000409760 GPRASP1Q5JY77 1395 aa13.73□□□□□ -0.21
VAMP8-202ENST00000409760 HAP1P54257 671 aaPredicted RBP13.73□□□□□ -0.21
VAMP8-202ENST00000409760 SIN3AQ96ST3 1273 aa13.73□□□□□ -0.21
VAMP8-202ENST00000409760 ITSN1Q15811 1721 aa13.72□□□□□ -0.21
VAMP8-202ENST00000409760 CLSPNQ9HAW4 1339 aa13.71□□□□□ -0.21
VAMP8-202ENST00000409760 NUDT16Q96DE0 195 aaKnown RBP13.71□□□□□ -0.21
VAMP8-202ENST00000409760 POLR3AO14802 1390 aaPredicted RBP13.71□□□□□ -0.22
VAMP8-202ENST00000409760 TONSLQ96HA7 1378 aa13.71□□□□□ -0.22
VAMP8-202ENST00000409760 BTG4Q9NY30 223 aa13.7□□□□□ -0.22
VAMP8-202ENST00000409760 PHRF1Q9P1Y6 1649 aaKnown RBP13.7□□□□□ -0.22
VAMP8-202ENST00000409760 THSD7AQ9UPZ6 1657 aa13.69□□□□□ -0.22
VAMP8-202ENST00000409760 NBPF1Q3BBV0 1214 aa13.69□□□□□ -0.22
VAMP8-202ENST00000409760 NGDNQ8NEJ9 315 aaKnown RBP13.69□□□□□ -0.22
VAMP8-202ENST00000409760 DEFB132Q7Z7B7 95 aa13.68□□□□□ -0.22
VAMP8-202ENST00000409760 CDK19Q9BWU1 502 aa13.68□□□□□ -0.22
VAMP8-202ENST00000409760 SPATA31A5Q5VU36 1347 aa13.67□□□□□ -0.22
VAMP8-202ENST00000409760 SPATA31A7Q8IWB4 1347 aa13.67□□□□□ -0.22
VAMP8-202ENST00000409760 KRT27Q7Z3Y8 459 aa13.67□□□□□ -0.22
VAMP8-202ENST00000409760 ZRANB1Q9UGI0 708 aa13.67□□□□□ -0.22
VAMP8-202ENST00000409760 TIMELESSQ9UNS1 1208 aa13.67□□□□□ -0.22
VAMP8-202ENST00000409760 PLEKHG3A1L390 1219 aa13.66□□□□□ -0.22
VAMP8-202ENST00000409760 FAM98CQ17RN3 349 aaKnown RBP13.66□□□□□ -0.22
VAMP8-202ENST00000409760 CCDC9Q9Y3X0 531 aaKnown RBP13.66□□□□□ -0.22
VAMP8-202ENST00000409760 KIAA0232Q92628 1395 aa13.66□□□□□ -0.22
VAMP8-202ENST00000409760 NRKQ7Z2Y5 1582 aa13.66□□□□□ -0.22
VAMP8-202ENST00000409760 ACEP12821 1306 aa13.65□□□□□ -0.22
VAMP8-202ENST00000409760 PAK3O75914 559 aaPredicted RBP13.65□□□□□ -0.22
VAMP8-202ENST00000409760 NBPF8Q3BBV2 869 aa13.65□□□□□ -0.22
VAMP8-202ENST00000409760 PRDM11Q9NQV5 511 aa13.64□□□□□ -0.23
VAMP8-202ENST00000409760 CCDC61Q9Y6R9 512 aa13.64□□□□□ -0.23
VAMP8-202ENST00000409760 USP19O94966 1318 aa13.64□□□□□ -0.23
VAMP8-202ENST00000409760 LMO7Q8WWI1 1683 aa13.63□□□□□ -0.23
VAMP8-202ENST00000409760 ROCK2O75116 1388 aaKnown RBP13.63□□□□□ -0.23
VAMP8-202ENST00000409760 CHRNA2Q15822 529 aa13.63□□□□□ -0.23
VAMP8-202ENST00000409760 SPATA31A1Q5TZJ5 1347 aa13.63□□□□□ -0.23
VAMP8-202ENST00000409760 CENPJQ9HC77 1338 aaPredicted RBP13.63□□□□□ -0.23
VAMP8-202ENST00000409760 NUTM2GQ5VZR2 741 aa13.62□□□□□ -0.23
VAMP8-202ENST00000409760 CAMTA1Q9Y6Y1 1673 aa13.62□□□□□ -0.23
VAMP8-202ENST00000409760 CPDO75976 1380 aa13.61□□□□□ -0.23
VAMP8-202ENST00000409760 QRICH2Q9H0J4 1663 aa13.61□□□□□ -0.23
VAMP8-202ENST00000409760 FAM182BQ5T319 152 aa13.61□□□□□ -0.23
VAMP8-202ENST00000409760 DISP2A7MBM2 1401 aa13.61□□□□□ -0.23
VAMP8-202ENST00000409760 PPIP5K1Q6PFW1 1433 aa13.61□□□□□ -0.23
VAMP8-202ENST00000409760 TNS1Q9HBL0 1735 aaKnown RBP13.61□□□□□ -0.23
VAMP8-202ENST00000409760 SLC24A1O60721 1099 aa13.6□□□□□ -0.23
VAMP8-202ENST00000409760 ZC3H6P61129 1189 aaKnown RBP13.6□□□□□ -0.23
VAMP8-202ENST00000409760 SSH2Q76I76 1423 aa13.6□□□□□ -0.23
VAMP8-202ENST00000409760 TRPM1Q7Z4N2 1603 aa13.6□□□□□ -0.23
VAMP8-202ENST00000409760 RGPD1P0DJD0 1748 aa13.59□□□□□ -0.23
VAMP8-202ENST00000409760 CABP2Q9NPB3 220 aa13.59□□□□□ -0.23
VAMP8-202ENST00000409760 LRP5O75197 1615 aa13.58□□□□□ -0.24
VAMP8-202ENST00000409760 A0A0G2JS52 829 aa13.58□□□□□ -0.24
VAMP8-202ENST00000409760 MYT1Q01538 1121 aa13.58□□□□□ -0.24
VAMP8-202ENST00000409760 SF3B2Q13435 895 aaKnown RBP13.58□□□□□ -0.24
VAMP8-202ENST00000409760 CARD11Q9BXL7 1154 aa13.58□□□□□ -0.24
VAMP8-202ENST00000409760 USP6P35125 1406 aa13.57□□□□□ -0.24
VAMP8-202ENST00000409760 SLIT3O75094 1523 aa13.57□□□□□ -0.24
VAMP8-202ENST00000409760 BRD4O60885 1362 aaPredicted RBP13.57□□□□□ -0.24
VAMP8-202ENST00000409760 BAG6P46379 1132 aa13.56□□□□□ -0.24
VAMP8-202ENST00000409760 SRPK2P78362 688 aaKnown RBP13.56□□□□□ -0.24
VAMP8-202ENST00000409760 LARP1Q6PKG0 1096 aaKnown RBP13.56□□□□□ -0.24
VAMP8-202ENST00000409760 BARGINQ6ZT62 677 aa13.56□□□□□ -0.24
VAMP8-202ENST00000409760 ABTB2Q8N961 1025 aa13.56□□□□□ -0.24
VAMP8-202ENST00000409760 CCER1Q8TC90 406 aaPredicted RBP13.56□□□□□ -0.24
VAMP8-202ENST00000409760 STRN4Q9NRL3 753 aa13.56□□□□□ -0.24
VAMP8-202ENST00000409760 EVC2Q86UK5 1308 aa13.56□□□□□ -0.24
VAMP8-202ENST00000409760 COL5A2P05997 1499 aaPredicted RBP13.55□□□□□ -0.24
VAMP8-202ENST00000409760 GCP02774 474 aa13.55□□□□□ -0.24
VAMP8-202ENST00000409760 EN1Q05925 392 aaPredicted RBP13.55□□□□□ -0.24
VAMP8-202ENST00000409760 CABP1Q9NZU7 370 aa13.55□□□□□ -0.24
VAMP8-202ENST00000409760 PIK3C2AO00443 1686 aa13.55□□□□□ -0.24
VAMP8-202ENST00000409760 SBNO2Q9Y2G9 1366 aa13.55□□□□□ -0.24
VAMP8-202ENST00000409760 COL18A1P39060 1754 aa13.53□□□□□ -0.24
VAMP8-202ENST00000409760 NLRP13Q86W25 1043 aa13.53□□□□□ -0.24
VAMP8-202ENST00000409760 PSDA5PKW4 1024 aaPredicted RBP13.52□□□□□ -0.25
VAMP8-202ENST00000409760 CAMKK2Q96RR4 588 aa13.52□□□□□ -0.25
VAMP8-202ENST00000409760 PARP4Q9UKK3 1724 aaKnown RBP13.52□□□□□ -0.25
VAMP8-202ENST00000409760 AATKQ6ZMQ8 1374 aa13.51□□□□□ -0.25
VAMP8-202ENST00000409760 EZH2Q15910 746 aaKnown RBP13.51□□□□□ -0.25
VAMP8-202ENST00000409760 FAM196AQ6ZSG2 479 aa13.51□□□□□ -0.25
VAMP8-202ENST00000409760 TCP11L2Q8N4U5 519 aa13.51□□□□□ -0.25
VAMP8-202ENST00000409760 USP35Q9P2H5 1018 aa13.51□□□□□ -0.25
VAMP8-202ENST00000409760 AKAP12Q02952 1782 aa13.5□□□□□ -0.25
VAMP8-202ENST00000409760 PEAK1Q9H792 1746 aa13.5□□□□□ -0.25
VAMP8-202ENST00000409760 RREB1Q92766 1687 aa13.5□□□□□ -0.25
VAMP8-202ENST00000409760 CRB1P82279 1406 aa13.5□□□□□ -0.25
VAMP8-202ENST00000409760 CPSF1Q10570 1443 aaKnown RBP13.5□□□□□ -0.25
VAMP8-202ENST00000409760 TRIM37O94972 964 aa13.5□□□□□ -0.25
VAMP8-202ENST00000409760 PUS7Q96PZ0 661 aaKnown RBP13.5□□□□□ -0.25
VAMP8-202ENST00000409760 EVA1CP58658 441 aa13.49□□□□□ -0.25
VAMP8-202ENST00000409760 THRAP3Q9Y2W1 955 aaKnown RBP13.49□□□□□ -0.25
VAMP8-202ENST00000409760 LRRC37A3O60309 1634 aa13.49□□□□□ -0.25
VAMP8-202ENST00000409760 NLRP6P59044 892 aa13.48□□□□□ -0.25
VAMP8-202ENST00000409760 NFAT5O94916 1531 aa13.48□□□□□ -0.25
VAMP8-202ENST00000409760 NUP188Q5SRE5 1749 aa13.47□□□□□ -0.25
VAMP8-202ENST00000409760 PARD3Q8TEW0 1356 aa13.47□□□□□ -0.25
VAMP8-202ENST00000409760 TTC21BQ7Z4L5 1316 aa13.47□□□□□ -0.25
VAMP8-202ENST00000409760 R3HDM1Q15032 1099 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms