RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 CABLES1Q8TDN4 633 aa43.89■■■■■ 4.62
TRAF3IP1-203ENST00000409739 MON2Q7Z3U7 1717 aa43.89■■■■■ 4.62
TRAF3IP1-203ENST00000409739 USP6P35125 1406 aa43.89■■■■■ 4.62
TRAF3IP1-203ENST00000409739 PHRF1Q9P1Y6 1649 aaKnown RBP43.88■■■■■ 4.62
TRAF3IP1-203ENST00000409739 NRKQ7Z2Y5 1582 aa43.87■■■■■ 4.61
TRAF3IP1-203ENST00000409739 PLEKHG5O94827 1062 aa43.85■■■■■ 4.61
TRAF3IP1-203ENST00000409739 ZNF772Q68DY9 489 aaPredicted RBP43.85■■■■■ 4.61
TRAF3IP1-203ENST00000409739 BRD4O60885 1362 aaPredicted RBP43.83■■■■■ 4.61
TRAF3IP1-203ENST00000409739 NGLY1Q96IV0 654 aa43.83■■■■■ 4.61
TRAF3IP1-203ENST00000409739 PLCH1Q4KWH8 1693 aa43.81■■■■■ 4.6
TRAF3IP1-203ENST00000409739 SLC24A1O60721 1099 aa43.81■■■■■ 4.6
TRAF3IP1-203ENST00000409739 HAP1P54257 671 aaPredicted RBP43.81■■■■■ 4.6
TRAF3IP1-203ENST00000409739 PUS7Q96PZ0 661 aaKnown RBP43.81■■■■■ 4.6
TRAF3IP1-203ENST00000409739 CPSF1Q10570 1443 aaKnown RBP43.81■■■■■ 4.6
TRAF3IP1-203ENST00000409739 SSH2Q76I76 1423 aa43.8■■■■■ 4.6
TRAF3IP1-203ENST00000409739 PIK3C2AO00443 1686 aa43.79■■■■■ 4.6
TRAF3IP1-203ENST00000409739 TNKS1BP1Q9C0C2 1729 aaKnown RBP43.79■■■■■ 4.6
TRAF3IP1-203ENST00000409739 CD163L1Q9NR16 1453 aa43.78■■■■■ 4.6
TRAF3IP1-203ENST00000409739 FNBP4Q8N3X1 1017 aaPredicted RBP43.75■■■■■ 4.59
TRAF3IP1-203ENST00000409739 NWD2Q9ULI1 1742 aa43.75■■■■■ 4.59
TRAF3IP1-203ENST00000409739 TMF1P82094 1093 aa43.73■■■■■ 4.59
TRAF3IP1-203ENST00000409739 NUTM2GQ5VZR2 741 aa43.73■■■■■ 4.59
TRAF3IP1-203ENST00000409739 ZNF692Q9BU19 519 aaPredicted RBP43.73■■■■■ 4.59
TRAF3IP1-203ENST00000409739 ABTB2Q8N961 1025 aa43.72■■■■■ 4.59
TRAF3IP1-203ENST00000409739 SLIT2O94813 1529 aa43.72■■■■■ 4.59
TRAF3IP1-203ENST00000409739 TMC1Q8TDI8 760 aa43.71■■■■■ 4.59
TRAF3IP1-203ENST00000409739 KTN1Q86UP2 1357 aaKnown RBP43.7■■■■■ 4.59
TRAF3IP1-203ENST00000409739 BCL9LQ86UU0 1499 aa43.7■■■■■ 4.59
TRAF3IP1-203ENST00000409739 COL14A1Q05707 1796 aaKnown RBP43.69■■■■■ 4.59
TRAF3IP1-203ENST00000409739 SLC12A5Q9H2X9 1139 aa43.69■■■■■ 4.58
TRAF3IP1-203ENST00000409739 USP21Q9UK80 565 aa43.69■■■■■ 4.58
TRAF3IP1-203ENST00000409739 NINLQ9Y2I6 1382 aa43.68■■■■■ 4.58
TRAF3IP1-203ENST00000409739 MYOM1P52179 1685 aa43.66■■■■■ 4.58
TRAF3IP1-203ENST00000409739 USP19O94966 1318 aa43.66■■■■■ 4.58
TRAF3IP1-203ENST00000409739 NRAPQ86VF7 1730 aa43.65■■■■■ 4.58
TRAF3IP1-203ENST00000409739 TTC21BQ7Z4L5 1316 aa43.64■■■■■ 4.58
TRAF3IP1-203ENST00000409739 EIF4G2P78344 907 aaKnown RBP eCLIP43.63■■■■■ 4.57
TRAF3IP1-203ENST00000409739 A0A1W2PP64 1363 aa43.63■■■■■ 4.57
TRAF3IP1-203ENST00000409739 ATRNO75882 1429 aa43.62■■■■■ 4.57
TRAF3IP1-203ENST00000409739 QTRT2Q9H974 415 aaKnown RBP43.61■■■■■ 4.57
TRAF3IP1-203ENST00000409739 SLIT3O75094 1523 aa43.61■■■■■ 4.57
TRAF3IP1-203ENST00000409739 USP54Q70EL1 1684 aa43.61■■■■■ 4.57
TRAF3IP1-203ENST00000409739 TTC21AQ8NDW8 1320 aa43.6■■■■■ 4.57
TRAF3IP1-203ENST00000409739 HSPA5P11021 654 aaKnown RBP43.6■■■■■ 4.57
TRAF3IP1-203ENST00000409739 NLRP13Q86W25 1043 aa43.6■■■■■ 4.57
TRAF3IP1-203ENST00000409739 HDGFL2Q7Z4V5 671 aaPredicted RBP43.59■■■■■ 4.57
TRAF3IP1-203ENST00000409739 FAM83GA6ND36 823 aa43.58■■■■■ 4.57
TRAF3IP1-203ENST00000409739 TERF2IPQ9NYB0 399 aa43.58■■■■■ 4.57
TRAF3IP1-203ENST00000409739 CDCA8Q53HL2 280 aa43.57■■■■■ 4.57
TRAF3IP1-203ENST00000409739 EDC4Q6P2E9 1401 aaKnown RBP43.56■■■■■ 4.56
TRAF3IP1-203ENST00000409739 RXRBP28702 533 aa43.56■■■■■ 4.56
TRAF3IP1-203ENST00000409739 TRPC5Q9UL62 973 aaPredicted RBP43.56■■■■■ 4.56
TRAF3IP1-203ENST00000409739 KIAA0232Q92628 1395 aa43.54■■■■■ 4.56
TRAF3IP1-203ENST00000409739 NLRP6P59044 892 aa43.54■■■■■ 4.56
TRAF3IP1-203ENST00000409739 CDK12Q9NYV4 1490 aaPredicted RBP43.53■■■■■ 4.56
TRAF3IP1-203ENST00000409739 UNC5CLQ8IV45 518 aa43.53■■■■■ 4.56
TRAF3IP1-203ENST00000409739 RBM6P78332 1123 aaKnown RBP43.51■■■■■ 4.56
TRAF3IP1-203ENST00000409739 PRDM11Q9NQV5 511 aa43.51■■■■■ 4.56
TRAF3IP1-203ENST00000409739 ANKRD36BQ8N2N9 1353 aa43.51■■■■■ 4.56
TRAF3IP1-203ENST00000409739 SOCS7O14512 581 aa43.49■■■■■ 4.55
TRAF3IP1-203ENST00000409739 ZC3H6P61129 1189 aaKnown RBP43.49■■■■■ 4.55
TRAF3IP1-203ENST00000409739 SUGP2Q8IX01 1082 aaKnown RBP eCLIP43.48■■■■■ 4.55
TRAF3IP1-203ENST00000409739 LMO7Q8WWI1 1683 aa43.48■■■■■ 4.55
TRAF3IP1-203ENST00000409739 GLI3P10071 1580 aa43.47■■■■■ 4.55
TRAF3IP1-203ENST00000409739 CPDO75976 1380 aa43.47■■■■■ 4.55
TRAF3IP1-203ENST00000409739 GCP02774 474 aa43.47■■■■■ 4.55
TRAF3IP1-203ENST00000409739 BTG4Q9NY30 223 aa43.44■■■■■ 4.54
TRAF3IP1-203ENST00000409739 RGS12O14924 1447 aa43.44■■■■■ 4.54
TRAF3IP1-203ENST00000409739 CHRNA2Q15822 529 aa43.43■■■■■ 4.54
TRAF3IP1-203ENST00000409739 USP31Q70CQ4 1352 aa43.42■■■■■ 4.54
TRAF3IP1-203ENST00000409739 NME9Q86XW9 330 aa43.42■■■■■ 4.54
TRAF3IP1-203ENST00000409739 NFAT5O94916 1531 aa43.42■■■■■ 4.54
TRAF3IP1-203ENST00000409739 KIF20BQ96Q89 1820 aa43.39■■■■■ 4.54
TRAF3IP1-203ENST00000409739 ZRANB1Q9UGI0 708 aa43.39■■■■■ 4.54
TRAF3IP1-203ENST00000409739 COL18A1P39060 1754 aa43.39■■■■■ 4.54
TRAF3IP1-203ENST00000409739 GJD4Q96KN9 370 aaPredicted RBP43.38■■■■■ 4.53
TRAF3IP1-203ENST00000409739 VPS72Q15906 364 aa43.37■■■■■ 4.53
TRAF3IP1-203ENST00000409739 CAMTA1Q9Y6Y1 1673 aa43.37■■■■■ 4.53
TRAF3IP1-203ENST00000409739 OVOS2A0A0J9YW53 1432 aa43.35■■■■■ 4.53
TRAF3IP1-203ENST00000409739 LTN1O94822 1766 aa43.35■■■■■ 4.53
TRAF3IP1-203ENST00000409739 OVOS2Q6IE36 1432 aa43.35■■■■■ 4.53
TRAF3IP1-203ENST00000409739 RGPD5Q99666 1765 aa43.34■■■■■ 4.53
TRAF3IP1-203ENST00000409739 KCNH5Q8NCM2 988 aa43.32■■■■■ 4.53
TRAF3IP1-203ENST00000409739 POLR3GLQ9BT43 218 aa43.31■■■■■ 4.52
TRAF3IP1-203ENST00000409739 SOX12O15370 315 aa43.28■■■■■ 4.52
TRAF3IP1-203ENST00000409739 CCDC9Q9Y3X0 531 aaKnown RBP43.28■■■■■ 4.52
TRAF3IP1-203ENST00000409739 BRWD3Q6RI45 1802 aa43.27■■■■■ 4.52
TRAF3IP1-203ENST00000409739 AATKQ6ZMQ8 1374 aa43.27■■■■■ 4.52
TRAF3IP1-203ENST00000409739 ZBTB7CA1YPR0 619 aa43.25■■■■■ 4.51
TRAF3IP1-203ENST00000409739 C11orf95C9JLR9 678 aaPredicted RBP43.25■■■■■ 4.51
TRAF3IP1-203ENST00000409739 COL5A2P05997 1499 aaPredicted RBP43.25■■■■■ 4.51
TRAF3IP1-203ENST00000409739 ARHGEF25Q86VW2 580 aa43.23■■■■■ 4.51
TRAF3IP1-203ENST00000409739 NSD3Q9BZ95 1437 aa43.22■■■■■ 4.51
TRAF3IP1-203ENST00000409739 ABCC6O95255 1503 aa43.22■■■■■ 4.51
TRAF3IP1-203ENST00000409739 STRN4Q9NRL3 753 aa43.21■■■■■ 4.51
TRAF3IP1-203ENST00000409739 SPATA31A5Q5VU36 1347 aa43.21■■■■■ 4.51
TRAF3IP1-203ENST00000409739 SPATA31A7Q8IWB4 1347 aa43.21■■■■■ 4.51
TRAF3IP1-203ENST00000409739 CARD14Q9BXL6 1004 aa43.2■■■■■ 4.51
TRAF3IP1-203ENST00000409739 COG3Q96JB2 828 aa43.16■■■■■ 4.5
TRAF3IP1-203ENST00000409739 THSD7AQ9UPZ6 1657 aa43.15■■■■■ 4.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms