RNA–Protein interactions for RNA: ENST00000409248.8

C4orf48-201, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C4orf48, Length 433 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-201ENST00000409248 ZNF772Q68DY9 489 aaPredicted RBP29.14■■■□□ 2.26
C4orf48-201ENST00000409248 USP6P35125 1406 aa29.13■■■□□ 2.25
C4orf48-201ENST00000409248 AFF2P51816 1311 aa29.13■■■□□ 2.25
C4orf48-201ENST00000409248 CRYBG1Q9Y4K1 1723 aa29.12■■■□□ 2.25
C4orf48-201ENST00000409248 PUS7Q96PZ0 661 aaKnown RBP29.12■■■□□ 2.25
C4orf48-201ENST00000409248 ILDR2Q71H61 639 aa29.11■■■□□ 2.25
C4orf48-201ENST00000409248 NGLY1Q96IV0 654 aa29.1■■■□□ 2.25
C4orf48-201ENST00000409248 MON2Q7Z3U7 1717 aa29.08■■■□□ 2.25
C4orf48-201ENST00000409248 TMF1P82094 1093 aa29.08■■■□□ 2.25
C4orf48-201ENST00000409248 NINLQ9Y2I6 1382 aa29.08■■■□□ 2.25
C4orf48-201ENST00000409248 PHRF1Q9P1Y6 1649 aaKnown RBP29.08■■■□□ 2.25
C4orf48-201ENST00000409248 NRKQ7Z2Y5 1582 aa29.07■■■□□ 2.24
C4orf48-201ENST00000409248 CABLES1Q8TDN4 633 aa29.07■■■□□ 2.24
C4orf48-201ENST00000409248 CPSF1Q10570 1443 aaKnown RBP29.06■■■□□ 2.24
C4orf48-201ENST00000409248 PLEKHG5O94827 1062 aa29.06■■■□□ 2.24
C4orf48-201ENST00000409248 EIF4G2P78344 907 aaKnown RBP eCLIP29.06■■■□□ 2.24
C4orf48-201ENST00000409248 POTEAQ6S8J7 498 aa29.06■■■□□ 2.24
C4orf48-201ENST00000409248 ZNF692Q9BU19 519 aaPredicted RBP29.06■■■□□ 2.24
C4orf48-201ENST00000409248 CDCA8Q53HL2 280 aa29.03■■■□□ 2.24
C4orf48-201ENST00000409248 ABTB2Q8N961 1025 aa29.03■■■□□ 2.24
C4orf48-201ENST00000409248 TMC1Q8TDI8 760 aa29.03■■■□□ 2.24
C4orf48-201ENST00000409248 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.03■■■□□ 2.24
C4orf48-201ENST00000409248 SSH2Q76I76 1423 aa29.03■■■□□ 2.24
C4orf48-201ENST00000409248 PLCH1Q4KWH8 1693 aa29.02■■■□□ 2.24
C4orf48-201ENST00000409248 KTN1Q86UP2 1357 aaKnown RBP29.02■■■□□ 2.24
C4orf48-201ENST00000409248 FNBP4Q8N3X1 1017 aaPredicted RBP29.02■■■□□ 2.24
C4orf48-201ENST00000409248 NWD2Q9ULI1 1742 aa29.01■■■□□ 2.23
C4orf48-201ENST00000409248 PIK3C2AO00443 1686 aa29.01■■■□□ 2.23
C4orf48-201ENST00000409248 CD163L1Q9NR16 1453 aa29■■■□□ 2.23
C4orf48-201ENST00000409248 HDGFL2Q7Z4V5 671 aaPredicted RBP29■■■□□ 2.23
C4orf48-201ENST00000409248 USP21Q9UK80 565 aa29■■■□□ 2.23
C4orf48-201ENST00000409248 TERF2IPQ9NYB0 399 aa28.99■■■□□ 2.23
C4orf48-201ENST00000409248 SLIT2O94813 1529 aa28.99■■■□□ 2.23
C4orf48-201ENST00000409248 COL14A1Q05707 1796 aaKnown RBP28.98■■■□□ 2.23
C4orf48-201ENST00000409248 TTC21AQ8NDW8 1320 aa28.98■■■□□ 2.23
C4orf48-201ENST00000409248 HSPA5P11021 654 aaKnown RBP28.98■■■□□ 2.23
C4orf48-201ENST00000409248 NUTM2GQ5VZR2 741 aa28.98■■■□□ 2.23
C4orf48-201ENST00000409248 NLRP13Q86W25 1043 aa28.97■■■□□ 2.23
C4orf48-201ENST00000409248 USP19O94966 1318 aa28.96■■■□□ 2.23
C4orf48-201ENST00000409248 SLC12A5Q9H2X9 1139 aa28.96■■■□□ 2.23
C4orf48-201ENST00000409248 TTC21BQ7Z4L5 1316 aa28.95■■■□□ 2.23
C4orf48-201ENST00000409248 A0A1W2PP64 1363 aa28.95■■■□□ 2.22
C4orf48-201ENST00000409248 BCL9LQ86UU0 1499 aa28.95■■■□□ 2.22
C4orf48-201ENST00000409248 EDC4Q6P2E9 1401 aaKnown RBP28.94■■■□□ 2.22
C4orf48-201ENST00000409248 TRPC5Q9UL62 973 aaPredicted RBP28.94■■■□□ 2.22
C4orf48-201ENST00000409248 ATRNO75882 1429 aa28.94■■■□□ 2.22
C4orf48-201ENST00000409248 QTRT2Q9H974 415 aaKnown RBP28.93■■■□□ 2.22
C4orf48-201ENST00000409248 SLIT3O75094 1523 aa28.93■■■□□ 2.22
C4orf48-201ENST00000409248 RXRBP28702 533 aa28.92■■■□□ 2.22
C4orf48-201ENST00000409248 CDK12Q9NYV4 1490 aaPredicted RBP28.91■■■□□ 2.22
C4orf48-201ENST00000409248 MYOM1P52179 1685 aa28.91■■■□□ 2.22
C4orf48-201ENST00000409248 NLRP6P59044 892 aa28.91■■■□□ 2.22
C4orf48-201ENST00000409248 PRDM11Q9NQV5 511 aa28.91■■■□□ 2.22
C4orf48-201ENST00000409248 ANKRD36BQ8N2N9 1353 aa28.9■■■□□ 2.22
C4orf48-201ENST00000409248 USP54Q70EL1 1684 aa28.9■■■□□ 2.22
C4orf48-201ENST00000409248 NRAPQ86VF7 1730 aa28.9■■■□□ 2.22
C4orf48-201ENST00000409248 KIAA0232Q92628 1395 aa28.89■■■□□ 2.22
C4orf48-201ENST00000409248 RBM6P78332 1123 aaKnown RBP28.89■■■□□ 2.22
C4orf48-201ENST00000409248 UNC5CLQ8IV45 518 aa28.89■■■□□ 2.22
C4orf48-201ENST00000409248 FAM83GA6ND36 823 aa28.88■■■□□ 2.21
C4orf48-201ENST00000409248 CPDO75976 1380 aa28.87■■■□□ 2.21
C4orf48-201ENST00000409248 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.85■■■□□ 2.21
C4orf48-201ENST00000409248 SOCS7O14512 581 aa28.84■■■□□ 2.21
C4orf48-201ENST00000409248 GCP02774 474 aa28.84■■■□□ 2.21
C4orf48-201ENST00000409248 ZC3H6P61129 1189 aaKnown RBP28.84■■■□□ 2.21
C4orf48-201ENST00000409248 USP31Q70CQ4 1352 aa28.83■■■□□ 2.21
C4orf48-201ENST00000409248 BTG4Q9NY30 223 aa28.82■■■□□ 2.2
C4orf48-201ENST00000409248 LMO7Q8WWI1 1683 aa28.81■■■□□ 2.2
C4orf48-201ENST00000409248 KCNH5Q8NCM2 988 aa28.81■■■□□ 2.2
C4orf48-201ENST00000409248 RGS12O14924 1447 aa28.8■■■□□ 2.2
C4orf48-201ENST00000409248 VPS72Q15906 364 aa28.79■■■□□ 2.2
C4orf48-201ENST00000409248 NME9Q86XW9 330 aa28.79■■■□□ 2.2
C4orf48-201ENST00000409248 GLI3P10071 1580 aa28.79■■■□□ 2.2
C4orf48-201ENST00000409248 NFAT5O94916 1531 aa28.79■■■□□ 2.2
C4orf48-201ENST00000409248 CHRNA2Q15822 529 aa28.78■■■□□ 2.2
C4orf48-201ENST00000409248 GJD4Q96KN9 370 aaPredicted RBP28.78■■■□□ 2.2
C4orf48-201ENST00000409248 OVOS2A0A0J9YW53 1432 aa28.77■■■□□ 2.2
C4orf48-201ENST00000409248 OVOS2Q6IE36 1432 aa28.77■■■□□ 2.2
C4orf48-201ENST00000409248 POLR3GLQ9BT43 218 aa28.76■■■□□ 2.19
C4orf48-201ENST00000409248 CCDC9Q9Y3X0 531 aaKnown RBP28.76■■■□□ 2.19
C4orf48-201ENST00000409248 KIF20BQ96Q89 1820 aa28.76■■■□□ 2.19
C4orf48-201ENST00000409248 ABCC6O95255 1503 aa28.74■■■□□ 2.19
C4orf48-201ENST00000409248 CAMTA1Q9Y6Y1 1673 aa28.73■■■□□ 2.19
C4orf48-201ENST00000409248 AATKQ6ZMQ8 1374 aa28.73■■■□□ 2.19
C4orf48-201ENST00000409248 ZRANB1Q9UGI0 708 aa28.72■■■□□ 2.19
C4orf48-201ENST00000409248 ZBTB7CA1YPR0 619 aa28.71■■■□□ 2.19
C4orf48-201ENST00000409248 SOX12O15370 315 aa28.71■■■□□ 2.19
C4orf48-201ENST00000409248 NSD3Q9BZ95 1437 aa28.7■■■□□ 2.19
C4orf48-201ENST00000409248 LTN1O94822 1766 aa28.7■■■□□ 2.18
C4orf48-201ENST00000409248 COL18A1P39060 1754 aa28.7■■■□□ 2.18
C4orf48-201ENST00000409248 COL5A2P05997 1499 aaPredicted RBP28.69■■■□□ 2.18
C4orf48-201ENST00000409248 ARHGEF25Q86VW2 580 aa28.68■■■□□ 2.18
C4orf48-201ENST00000409248 COG3Q96JB2 828 aa28.68■■■□□ 2.18
C4orf48-201ENST00000409248 STRN4Q9NRL3 753 aa28.68■■■□□ 2.18
C4orf48-201ENST00000409248 EVA1CP58658 441 aa28.67■■■□□ 2.18
C4orf48-201ENST00000409248 C11orf95C9JLR9 678 aaPredicted RBP28.66■■■□□ 2.18
C4orf48-201ENST00000409248 SPATA31A5Q5VU36 1347 aa28.66■■■□□ 2.18
C4orf48-201ENST00000409248 SPATA31A7Q8IWB4 1347 aa28.66■■■□□ 2.18
C4orf48-201ENST00000409248 KIF7Q2M1P5 1343 aa28.65■■■□□ 2.18
C4orf48-201ENST00000409248 RGPD5Q99666 1765 aa28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms