RNA–Protein interactions for RNA: ENST00000409093.1

LRRTM4-202, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

APPRIS P3 TSL 2 BASIC

Gene LRRTM4, Length 2,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-202ENST00000409093 AMOTL2Q9Y2J4 779 aa13.17□□□□□ -0.3
LRRTM4-202ENST00000409093 CCDC61Q9Y6R9 512 aa13.17□□□□□ -0.3
LRRTM4-202ENST00000409093 RNF123Q5XPI4 1314 aa13.17□□□□□ -0.3
LRRTM4-202ENST00000409093 CPSF1Q10570 1443 aaKnown RBP13.17□□□□□ -0.3
LRRTM4-202ENST00000409093 PTCH1Q13635 1447 aa13.17□□□□□ -0.3
LRRTM4-202ENST00000409093 MSH5O43196 834 aa13.17□□□□□ -0.3
LRRTM4-202ENST00000409093 EDC4Q6P2E9 1401 aaKnown RBP13.17□□□□□ -0.3
LRRTM4-202ENST00000409093 APAF1O14727 1248 aa13.16□□□□□ -0.3
LRRTM4-202ENST00000409093 XRN1Q8IZH2 1706 aaKnown RBP13.16□□□□□ -0.3
LRRTM4-202ENST00000409093 RCAN3Q9UKA8 241 aa13.16□□□□□ -0.3
LRRTM4-202ENST00000409093 NCKAP5LQ9HCH0 1330 aa13.16□□□□□ -0.3
LRRTM4-202ENST00000409093 TOPAZ1Q8N9V7 1692 aa13.16□□□□□ -0.3
LRRTM4-202ENST00000409093 ZNF521Q96K83 1311 aa13.15□□□□□ -0.3
LRRTM4-202ENST00000409093 PRR36Q9H6K5 1346 aa13.15□□□□□ -0.3
LRRTM4-202ENST00000409093 GOLGA2Q08379 1002 aa13.14□□□□□ -0.31
LRRTM4-202ENST00000409093 PPP4R2Q9NY27 417 aa13.14□□□□□ -0.31
LRRTM4-202ENST00000409093 NGEFQ8N5V2 710 aa13.13□□□□□ -0.31
LRRTM4-202ENST00000409093 RUNDC1Q96C34 613 aa13.13□□□□□ -0.31
LRRTM4-202ENST00000409093 COL3A1P02461 1466 aaPredicted RBP13.13□□□□□ -0.31
LRRTM4-202ENST00000409093 FGD1P98174 961 aa13.12□□□□□ -0.31
LRRTM4-202ENST00000409093 ANKLE2Q86XL3 938 aa13.12□□□□□ -0.31
LRRTM4-202ENST00000409093 RBM19Q9Y4C8 960 aaKnown RBP13.12□□□□□ -0.31
LRRTM4-202ENST00000409093 PIK3R4Q99570 1358 aa13.12□□□□□ -0.31
LRRTM4-202ENST00000409093 MAP2P11137 1827 aaKnown RBP13.12□□□□□ -0.31
LRRTM4-202ENST00000409093 NUTM2FA1L443 756 aa13.12□□□□□ -0.31
LRRTM4-202ENST00000409093 U2AF1L5P0DN76 240 aaPredicted RBP13.12□□□□□ -0.31
LRRTM4-202ENST00000409093 U2AF1Q01081 240 aaKnown RBP eCLIP13.12□□□□□ -0.31
LRRTM4-202ENST00000409093 RRP1P56182 461 aaKnown RBP13.11□□□□□ -0.31
LRRTM4-202ENST00000409093 ZNF692Q9BU19 519 aaPredicted RBP13.11□□□□□ -0.31
LRRTM4-202ENST00000409093 IQSEC2Q5JU85 1478 aa13.11□□□□□ -0.31
LRRTM4-202ENST00000409093 NME9Q86XW9 330 aa13.11□□□□□ -0.31
LRRTM4-202ENST00000409093 NRKQ7Z2Y5 1582 aa13.1□□□□□ -0.31
LRRTM4-202ENST00000409093 DUSP27Q5VZP5 1158 aa13.1□□□□□ -0.31
LRRTM4-202ENST00000409093 NKTRP30414 1462 aaKnown RBP13.1□□□□□ -0.31
LRRTM4-202ENST00000409093 CHD2O14647 1828 aaKnown RBP13.1□□□□□ -0.31
LRRTM4-202ENST00000409093 U2SURPO15042 1029 aaKnown RBP13.09□□□□□ -0.31
LRRTM4-202ENST00000409093 KCNA6P17658 529 aa13.09□□□□□ -0.31
LRRTM4-202ENST00000409093 RGPD8O14715 1765 aaPredicted RBP13.09□□□□□ -0.31
LRRTM4-202ENST00000409093 SLFN5Q08AF3 891 aa13.09□□□□□ -0.31
LRRTM4-202ENST00000409093 ACEP12821 1306 aa13.09□□□□□ -0.31
LRRTM4-202ENST00000409093 A0A0U1RQG5 324 aaPredicted RBP13.08□□□□□ -0.32
LRRTM4-202ENST00000409093 TCP11L2Q8N4U5 519 aa13.08□□□□□ -0.32
LRRTM4-202ENST00000409093 COG3Q96JB2 828 aa13.08□□□□□ -0.32
LRRTM4-202ENST00000409093 PNPLA6Q8IY17 1366 aa13.08□□□□□ -0.32
LRRTM4-202ENST00000409093 PLEKHG3A1L390 1219 aa13.08□□□□□ -0.32
LRRTM4-202ENST00000409093 PPM1GO15355 546 aaPredicted RBP13.08□□□□□ -0.32
LRRTM4-202ENST00000409093 DIAPH1O60610 1272 aaKnown RBP13.08□□□□□ -0.32
LRRTM4-202ENST00000409093 NEUROD2Q15784 382 aa13.08□□□□□ -0.32
LRRTM4-202ENST00000409093 BCL11BQ9C0K0 894 aaPredicted RBP13.08□□□□□ -0.32
LRRTM4-202ENST00000409093 RRP7AQ9Y3A4 280 aaKnown RBP13.08□□□□□ -0.32
LRRTM4-202ENST00000409093 E9PSI1 815 aa13.07□□□□□ -0.32
LRRTM4-202ENST00000409093 WWC1Q8IX03 1113 aa13.07□□□□□ -0.32
LRRTM4-202ENST00000409093 ZMYND15Q9H091 742 aa13.07□□□□□ -0.32
LRRTM4-202ENST00000409093 POLKQ9UBT6 870 aa13.07□□□□□ -0.32
LRRTM4-202ENST00000409093 ZRANB1Q9UGI0 708 aa13.07□□□□□ -0.32
LRRTM4-202ENST00000409093 FBLN1P23142 703 aa13.07□□□□□ -0.32
LRRTM4-202ENST00000409093 ARXQ96QS3 562 aa13.07□□□□□ -0.32
LRRTM4-202ENST00000409093 USP6P35125 1406 aa13.06□□□□□ -0.32
LRRTM4-202ENST00000409093 B4GALNT3Q6L9W6 998 aa13.06□□□□□ -0.32
LRRTM4-202ENST00000409093 IL27Q8NEV9 243 aa13.06□□□□□ -0.32
LRRTM4-202ENST00000409093 SPINK5Q9NQ38 1064 aaPredicted RBP13.06□□□□□ -0.32
LRRTM4-202ENST00000409093 RTN4Q9NQC3 1192 aaKnown RBP13.06□□□□□ -0.32
LRRTM4-202ENST00000409093 AATKQ6ZMQ8 1374 aa13.06□□□□□ -0.32
LRRTM4-202ENST00000409093 TRMT2AQ8IZ69 625 aaKnown RBP13.05□□□□□ -0.32
LRRTM4-202ENST00000409093 FMN2Q9NZ56 1722 aa13.05□□□□□ -0.32
LRRTM4-202ENST00000409093 TTC21BQ7Z4L5 1316 aa13.05□□□□□ -0.32
LRRTM4-202ENST00000409093 NALCNQ8IZF0 1738 aa13.05□□□□□ -0.32
LRRTM4-202ENST00000409093 DMRT2Q9Y5R5 561 aa13.05□□□□□ -0.32
LRRTM4-202ENST00000409093 CDK12Q9NYV4 1490 aaPredicted RBP13.05□□□□□ -0.32
LRRTM4-202ENST00000409093 NPHP4O75161 1426 aaPredicted RBP13.04□□□□□ -0.32
LRRTM4-202ENST00000409093 EMILIN1Q9Y6C2 1016 aa13.04□□□□□ -0.32
LRRTM4-202ENST00000409093 MAPK8IP3Q9UPT6 1336 aa13.04□□□□□ -0.32
LRRTM4-202ENST00000409093 ANKARQ7Z5J8 1434 aa13.04□□□□□ -0.32
LRRTM4-202ENST00000409093 PMFBP1Q8TBY8 1022 aa13.04□□□□□ -0.32
LRRTM4-202ENST00000409093 CCDC27Q2M243 656 aa13.03□□□□□ -0.32
LRRTM4-202ENST00000409093 NGDNQ8NEJ9 315 aaKnown RBP13.03□□□□□ -0.32
LRRTM4-202ENST00000409093 PLEKHF1Q96S99 279 aa13.03□□□□□ -0.32
LRRTM4-202ENST00000409093 PHF23Q9BUL5 403 aaPredicted RBP13.03□□□□□ -0.32
LRRTM4-202ENST00000409093 OVOS2A0A0J9YW53 1432 aa13.02□□□□□ -0.32
LRRTM4-202ENST00000409093 OVOS2Q6IE36 1432 aa13.02□□□□□ -0.32
LRRTM4-202ENST00000409093 LRRC7Q96NW7 1537 aa13.02□□□□□ -0.32
LRRTM4-202ENST00000409093 PLIN1O60240 522 aa13.02□□□□□ -0.33
LRRTM4-202ENST00000409093 PNNQ9H307 717 aaKnown RBP13.02□□□□□ -0.33
LRRTM4-202ENST00000409093 RRS1Q15050 365 aaKnown RBP13.01□□□□□ -0.33
LRRTM4-202ENST00000409093 WDR63Q8IWG1 891 aa13.01□□□□□ -0.33
LRRTM4-202ENST00000409093 SSH2Q76I76 1423 aa13.01□□□□□ -0.33
LRRTM4-202ENST00000409093 TTC21AQ8NDW8 1320 aa13□□□□□ -0.33
LRRTM4-202ENST00000409093 EXOC6Q8TAG9 804 aa13□□□□□ -0.33
LRRTM4-202ENST00000409093 AAMPQ13685 434 aa13□□□□□ -0.33
LRRTM4-202ENST00000409093 FCHSD2O94868 740 aa12.99□□□□□ -0.33
LRRTM4-202ENST00000409093 TMPOP42166 694 aaKnown RBP12.99□□□□□ -0.33
LRRTM4-202ENST00000409093 NEFMP07197 916 aa12.98□□□□□ -0.33
LRRTM4-202ENST00000409093 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.98□□□□□ -0.33
LRRTM4-202ENST00000409093 ADGRL3Q9HAR2 1447 aa12.98□□□□□ -0.33
LRRTM4-202ENST00000409093 IL13P35225 146 aa12.98□□□□□ -0.33
LRRTM4-202ENST00000409093 RBM33Q96EV2 1170 aaKnown RBP12.98□□□□□ -0.33
LRRTM4-202ENST00000409093 RSPH6AQ9H0K4 717 aa12.98□□□□□ -0.33
LRRTM4-202ENST00000409093 PIK3C2AO00443 1686 aa12.98□□□□□ -0.33
LRRTM4-202ENST00000409093 PRKAR2BP31323 418 aa12.97□□□□□ -0.33
LRRTM4-202ENST00000409093 NWD1Q149M9 1564 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms