RNA–Protein interactions for RNA: ENST00000407263.2

TSPAN9-202, Transcript of tetraspanin 9, humanhuman

TSL 5 BASIC

Gene TSPAN9, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-202ENST00000407263 ARHGEF10O15013 1369 aa14.47□□□□□ -0.09
TSPAN9-202ENST00000407263 PAK3O75914 559 aaPredicted RBP14.46□□□□□ -0.09
TSPAN9-202ENST00000407263 NRAPQ86VF7 1730 aa14.46□□□□□ -0.1
TSPAN9-202ENST00000407263 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.46□□□□□ -0.1
TSPAN9-202ENST00000407263 USP54Q70EL1 1684 aa14.46□□□□□ -0.1
TSPAN9-202ENST00000407263 CD163L1Q9NR16 1453 aa14.45□□□□□ -0.1
TSPAN9-202ENST00000407263 MYT1Q01538 1121 aa14.45□□□□□ -0.1
TSPAN9-202ENST00000407263 CABP1Q9NZU7 370 aa14.45□□□□□ -0.1
TSPAN9-202ENST00000407263 NWD2Q9ULI1 1742 aa14.44□□□□□ -0.1
TSPAN9-202ENST00000407263 PLEKHG3A1L390 1219 aa14.44□□□□□ -0.1
TSPAN9-202ENST00000407263 ADAMTS2O95450 1211 aa14.44□□□□□ -0.1
TSPAN9-202ENST00000407263 LTN1O94822 1766 aa14.43□□□□□ -0.1
TSPAN9-202ENST00000407263 COL14A1Q05707 1796 aaKnown RBP14.43□□□□□ -0.1
TSPAN9-202ENST00000407263 TMC1Q8TDI8 760 aa14.43□□□□□ -0.1
TSPAN9-202ENST00000407263 CABLES1Q8TDN4 633 aa14.43□□□□□ -0.1
TSPAN9-202ENST00000407263 HSPA5P11021 654 aaKnown RBP14.42□□□□□ -0.1
TSPAN9-202ENST00000407263 HAP1P54257 671 aaPredicted RBP14.42□□□□□ -0.1
TSPAN9-202ENST00000407263 TMF1P82094 1093 aa14.42□□□□□ -0.1
TSPAN9-202ENST00000407263 NUTM2GQ5VZR2 741 aa14.42□□□□□ -0.1
TSPAN9-202ENST00000407263 C8orf37Q96NL8 207 aa14.42□□□□□ -0.1
TSPAN9-202ENST00000407263 CPSF1Q10570 1443 aaKnown RBP14.41□□□□□ -0.1
TSPAN9-202ENST00000407263 EIF4G2P78344 907 aaKnown RBP eCLIP14.41□□□□□ -0.1
TSPAN9-202ENST00000407263 A0A1W2PP64 1363 aa14.41□□□□□ -0.1
TSPAN9-202ENST00000407263 KTN1Q86UP2 1357 aaKnown RBP14.41□□□□□ -0.1
TSPAN9-202ENST00000407263 RGPD5Q99666 1765 aa14.4□□□□□ -0.1
TSPAN9-202ENST00000407263 SLIT3O75094 1523 aa14.4□□□□□ -0.1
TSPAN9-202ENST00000407263 SSH2Q76I76 1423 aa14.4□□□□□ -0.1
TSPAN9-202ENST00000407263 AFF2P51816 1311 aa14.4□□□□□ -0.1
TSPAN9-202ENST00000407263 ANKRD26Q9UPS8 1709 aa14.38□□□□□ -0.11
TSPAN9-202ENST00000407263 NINLQ9Y2I6 1382 aa14.38□□□□□ -0.11
TSPAN9-202ENST00000407263 POLR3GLQ9BT43 218 aa14.38□□□□□ -0.11
TSPAN9-202ENST00000407263 SLC12A5Q9H2X9 1139 aa14.38□□□□□ -0.11
TSPAN9-202ENST00000407263 RGS17Q9UGC6 210 aaPredicted RBP14.38□□□□□ -0.11
TSPAN9-202ENST00000407263 LMO7Q8WWI1 1683 aa14.37□□□□□ -0.11
TSPAN9-202ENST00000407263 BRD4O60885 1362 aaPredicted RBP14.36□□□□□ -0.11
TSPAN9-202ENST00000407263 EDC4Q6P2E9 1401 aaKnown RBP14.36□□□□□ -0.11
TSPAN9-202ENST00000407263 ABTB2Q8N961 1025 aa14.36□□□□□ -0.11
TSPAN9-202ENST00000407263 ANKRD36BQ8N2N9 1353 aa14.35□□□□□ -0.11
TSPAN9-202ENST00000407263 HDGFL2Q7Z4V5 671 aaPredicted RBP14.35□□□□□ -0.11
TSPAN9-202ENST00000407263 NGLY1Q96IV0 654 aa14.35□□□□□ -0.11
TSPAN9-202ENST00000407263 TTC21BQ7Z4L5 1316 aa14.35□□□□□ -0.11
TSPAN9-202ENST00000407263 SLIT2O94813 1529 aa14.35□□□□□ -0.11
TSPAN9-202ENST00000407263 NFAT5O94916 1531 aa14.35□□□□□ -0.11
TSPAN9-202ENST00000407263 WNK3Q9BYP7 1800 aa14.34□□□□□ -0.11
TSPAN9-202ENST00000407263 POTEAQ6S8J7 498 aa14.34□□□□□ -0.11
TSPAN9-202ENST00000407263 ILDR2Q71H61 639 aa14.34□□□□□ -0.11
TSPAN9-202ENST00000407263 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.34□□□□□ -0.11
TSPAN9-202ENST00000407263 USP19O94966 1318 aa14.34□□□□□ -0.11
TSPAN9-202ENST00000407263 COL18A1P39060 1754 aa14.34□□□□□ -0.11
TSPAN9-202ENST00000407263 CDCA8Q53HL2 280 aa14.33□□□□□ -0.12
TSPAN9-202ENST00000407263 PUS7Q96PZ0 661 aaKnown RBP14.33□□□□□ -0.12
TSPAN9-202ENST00000407263 TERF2IPQ9NYB0 399 aa14.33□□□□□ -0.12
TSPAN9-202ENST00000407263 GLI3P10071 1580 aa14.33□□□□□ -0.12
TSPAN9-202ENST00000407263 TTC21AQ8NDW8 1320 aa14.33□□□□□ -0.12
TSPAN9-202ENST00000407263 KIAA0232Q92628 1395 aa14.33□□□□□ -0.12
TSPAN9-202ENST00000407263 BCL9LQ86UU0 1499 aa14.32□□□□□ -0.12
TSPAN9-202ENST00000407263 BRWD3Q6RI45 1802 aa14.32□□□□□ -0.12
TSPAN9-202ENST00000407263 ZNF692Q9BU19 519 aaPredicted RBP14.32□□□□□ -0.12
TSPAN9-202ENST00000407263 SOX12O15370 315 aa14.31□□□□□ -0.12
TSPAN9-202ENST00000407263 NLRP6P59044 892 aa14.31□□□□□ -0.12
TSPAN9-202ENST00000407263 ZNF772Q68DY9 489 aaPredicted RBP14.31□□□□□ -0.12
TSPAN9-202ENST00000407263 NME9Q86XW9 330 aa14.31□□□□□ -0.12
TSPAN9-202ENST00000407263 USP21Q9UK80 565 aa14.31□□□□□ -0.12
TSPAN9-202ENST00000407263 OVOS2A0A0J9YW53 1432 aa14.31□□□□□ -0.12
TSPAN9-202ENST00000407263 ATRNO75882 1429 aa14.31□□□□□ -0.12
TSPAN9-202ENST00000407263 OVOS2Q6IE36 1432 aa14.31□□□□□ -0.12
TSPAN9-202ENST00000407263 NSD3Q9BZ95 1437 aa14.31□□□□□ -0.12
TSPAN9-202ENST00000407263 ZBTB7CA1YPR0 619 aa14.3□□□□□ -0.12
TSPAN9-202ENST00000407263 NLRP13Q86W25 1043 aa14.3□□□□□ -0.12
TSPAN9-202ENST00000407263 ZRANB1Q9UGI0 708 aa14.3□□□□□ -0.12
TSPAN9-202ENST00000407263 ZC3H6P61129 1189 aaKnown RBP14.29□□□□□ -0.12
TSPAN9-202ENST00000407263 CHRNA2Q15822 529 aa14.29□□□□□ -0.12
TSPAN9-202ENST00000407263 PRDM11Q9NQV5 511 aa14.29□□□□□ -0.12
TSPAN9-202ENST00000407263 RGS12O14924 1447 aa14.28□□□□□ -0.12
TSPAN9-202ENST00000407263 CAMTA1Q9Y6Y1 1673 aa14.28□□□□□ -0.12
TSPAN9-202ENST00000407263 RGPD2P0DJD1 1756 aa14.27□□□□□ -0.12
TSPAN9-202ENST00000407263 KIF7Q2M1P5 1343 aa14.27□□□□□ -0.12
TSPAN9-202ENST00000407263 C11orf95C9JLR9 678 aaPredicted RBP14.27□□□□□ -0.13
TSPAN9-202ENST00000407263 FNBP4Q8N3X1 1017 aaPredicted RBP14.27□□□□□ -0.13
TSPAN9-202ENST00000407263 MAP2P11137 1827 aaKnown RBP14.27□□□□□ -0.13
TSPAN9-202ENST00000407263 FAM208AQ9UK61 1670 aaKnown RBP14.26□□□□□ -0.13
TSPAN9-202ENST00000407263 CPDO75976 1380 aa14.26□□□□□ -0.13
TSPAN9-202ENST00000407263 USP31Q70CQ4 1352 aa14.26□□□□□ -0.13
TSPAN9-202ENST00000407263 FAM83GA6ND36 823 aa14.26□□□□□ -0.13
TSPAN9-202ENST00000407263 PEAK1Q9H792 1746 aa14.26□□□□□ -0.13
TSPAN9-202ENST00000407263 ABCC6O95255 1503 aa14.25□□□□□ -0.13
TSPAN9-202ENST00000407263 GCP02774 474 aa14.25□□□□□ -0.13
TSPAN9-202ENST00000407263 BTG4Q9NY30 223 aa14.25□□□□□ -0.13
TSPAN9-202ENST00000407263 COL5A2P05997 1499 aaPredicted RBP14.25□□□□□ -0.13
TSPAN9-202ENST00000407263 THSD7AQ9UPZ6 1657 aa14.24□□□□□ -0.13
TSPAN9-202ENST00000407263 UNC5CLQ8IV45 518 aa14.24□□□□□ -0.13
TSPAN9-202ENST00000407263 QTRT2Q9H974 415 aaKnown RBP14.24□□□□□ -0.13
TSPAN9-202ENST00000407263 TRPC5Q9UL62 973 aaPredicted RBP14.24□□□□□ -0.13
TSPAN9-202ENST00000407263 CDK12Q9NYV4 1490 aaPredicted RBP14.24□□□□□ -0.13
TSPAN9-202ENST00000407263 CCDC7Q96M83 1385 aa14.23□□□□□ -0.13
TSPAN9-202ENST00000407263 CCDC9Q9Y3X0 531 aaKnown RBP14.23□□□□□ -0.13
TSPAN9-202ENST00000407263 RXRBP28702 533 aa14.22□□□□□ -0.13
TSPAN9-202ENST00000407263 CARD14Q9BXL6 1004 aa14.22□□□□□ -0.13
TSPAN9-202ENST00000407263 GGNBP2Q9H3C7 697 aa14.22□□□□□ -0.13
TSPAN9-202ENST00000407263 STRN4Q9NRL3 753 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms