RNA–Protein interactions for RNA: ENST00000407144.6

CUEDC1-202, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CUEDC1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-202ENST00000407144 WDR63Q8IWG1 891 aa27.61■■■□□ 2.01
CUEDC1-202ENST00000407144 ZNF710Q8N1W2 664 aa27.61■■■□□ 2.01
CUEDC1-202ENST00000407144 BCL11BQ9C0K0 894 aaPredicted RBP27.61■■■□□ 2.01
CUEDC1-202ENST00000407144 CDC42BPAQ5VT25 1732 aa27.61■■■□□ 2.01
CUEDC1-202ENST00000407144 NUCB2P80303 420 aa27.6■■■□□ 2.01
CUEDC1-202ENST00000407144 PHF23Q9BUL5 403 aaPredicted RBP27.6■■■□□ 2.01
CUEDC1-202ENST00000407144 TMEM51Q9NW97 253 aa27.6■■■□□ 2.01
CUEDC1-202ENST00000407144 IPO4Q8TEX9 1081 aaKnown RBP27.59■■■□□ 2.01
CUEDC1-202ENST00000407144 CBX1P83916 185 aa27.58■■■□□ 2
CUEDC1-202ENST00000407144 LRSAM1Q6UWE0 723 aa27.58■■■□□ 2
CUEDC1-202ENST00000407144 GAS2L2Q8NHY3 880 aa27.58■■■□□ 2
CUEDC1-202ENST00000407144 KIF16BQ96L93 1317 aa27.57■■■□□ 2
CUEDC1-202ENST00000407144 POLR3AO14802 1390 aaPredicted RBP27.56■■■□□ 2
CUEDC1-202ENST00000407144 CD2BP2O95400 341 aaKnown RBP27.56■■■□□ 2
CUEDC1-202ENST00000407144 IQGAP1P46940 1657 aa27.56■■■□□ 2
CUEDC1-202ENST00000407144 MYOM1P52179 1685 aa27.56■■■□□ 2
CUEDC1-202ENST00000407144 CYP2E1P05181 493 aaPredicted RBP27.56■■■□□ 2
CUEDC1-202ENST00000407144 ZKSCAN2Q63HK3 967 aa27.56■■■□□ 2
CUEDC1-202ENST00000407144 ZNF777Q9ULD5 760 aaPredicted RBP27.56■■■□□ 2
CUEDC1-202ENST00000407144 RGL3Q3MIN7 710 aa27.55■■■□□ 2
CUEDC1-202ENST00000407144 MCTP1Q6DN14 999 aa27.55■■■□□ 2
CUEDC1-202ENST00000407144 DZIP1LQ8IYY4 767 aaKnown RBP27.55■■■□□ 2
CUEDC1-202ENST00000407144 PLA2R1Q13018 1463 aa27.55■■■□□ 2
CUEDC1-202ENST00000407144 NCBP3Q53F19 620 aaKnown RBP27.53■■■□□ 2
CUEDC1-202ENST00000407144 IQSEC2Q5JU85 1478 aa27.53■■■□□ 2
CUEDC1-202ENST00000407144 BMP2KLQ5H9B9 411 aa27.53■■■□□ 2
CUEDC1-202ENST00000407144 FOXD4L1Q9NU39 408 aa27.53■■■□□ 2
CUEDC1-202ENST00000407144 ATP2B3Q16720 1220 aa27.52■■■□□ 2
CUEDC1-202ENST00000407144 CT47B1P0C2W7 299 aaPredicted RBP27.51■■□□□ 1.99
CUEDC1-202ENST00000407144 CCDC27Q2M243 656 aa27.51■■□□□ 1.99
CUEDC1-202ENST00000407144 NUCB1Q02818 461 aa27.5■■□□□ 1.99
CUEDC1-202ENST00000407144 FTSJ3Q8IY81 847 aaKnown RBP27.5■■□□□ 1.99
CUEDC1-202ENST00000407144 DDX19BQ9UMR2 479 aa27.5■■□□□ 1.99
CUEDC1-202ENST00000407144 CDC42BPBQ9Y5S2 1711 aa27.5■■□□□ 1.99
CUEDC1-202ENST00000407144 KIF3AQ9Y496 699 aa27.49■■□□□ 1.99
CUEDC1-202ENST00000407144 RUNDC1Q96C34 613 aa27.49■■□□□ 1.99
CUEDC1-202ENST00000407144 TSPY4P0CV99 314 aa27.48■■□□□ 1.99
CUEDC1-202ENST00000407144 TSPY10P0CW01 314 aa27.48■■□□□ 1.99
CUEDC1-202ENST00000407144 PIBF1Q8WXW3 757 aa27.48■■□□□ 1.99
CUEDC1-202ENST00000407144 CFAP74Q9C0B2 1584 aa27.48■■□□□ 1.99
CUEDC1-202ENST00000407144 BCL2L13Q9BXK5 485 aa27.47■■□□□ 1.99
CUEDC1-202ENST00000407144 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP27.47■■□□□ 1.99
CUEDC1-202ENST00000407144 PLCH2O75038 1416 aa27.47■■□□□ 1.99
CUEDC1-202ENST00000407144 DNTTIP2Q5QJE6 756 aaKnown RBP27.46■■□□□ 1.99
CUEDC1-202ENST00000407144 CWC22Q9HCG8 908 aaKnown RBP27.46■■□□□ 1.99
CUEDC1-202ENST00000407144 ARHGEF5Q12774 1597 aa27.46■■□□□ 1.99
CUEDC1-202ENST00000407144 PREX2Q70Z35 1606 aa27.45■■□□□ 1.99
CUEDC1-202ENST00000407144 FANCAO15360 1455 aa27.45■■□□□ 1.99
CUEDC1-202ENST00000407144 ATP10AO60312 1499 aa27.45■■□□□ 1.99
CUEDC1-202ENST00000407144 GPT2Q8TD30 523 aa27.45■■□□□ 1.99
CUEDC1-202ENST00000407144 SHPRHQ149N8 1683 aa27.43■■□□□ 1.98
CUEDC1-202ENST00000407144 PTMAP06454 111 aaKnown RBP27.43■■□□□ 1.98
CUEDC1-202ENST00000407144 ARHGAP5Q13017 1502 aa27.42■■□□□ 1.98
CUEDC1-202ENST00000407144 NOLC1Q14978 699 aaKnown RBP eCLIP27.42■■□□□ 1.98
CUEDC1-202ENST00000407144 FEZ1Q99689 392 aa27.42■■□□□ 1.98
CUEDC1-202ENST00000407144 CHMP4BQ9H444 224 aaKnown RBP27.42■■□□□ 1.98
CUEDC1-202ENST00000407144 UNC13BO14795 1591 aa27.41■■□□□ 1.98
CUEDC1-202ENST00000407144 REREQ9P2R6 1566 aa27.41■■□□□ 1.98
CUEDC1-202ENST00000407144 TAF7LQ5H9L4 462 aa27.41■■□□□ 1.98
CUEDC1-202ENST00000407144 PDCL2Q8N4E4 241 aa27.41■■□□□ 1.98
CUEDC1-202ENST00000407144 SCAF11Q99590 1463 aaKnown RBP27.41■■□□□ 1.98
CUEDC1-202ENST00000407144 RABEP1Q15276 862 aa27.41■■□□□ 1.98
CUEDC1-202ENST00000407144 CHD1LQ86WJ1 897 aa27.41■■□□□ 1.98
CUEDC1-202ENST00000407144 SPTLC3Q9NUV7 552 aa27.41■■□□□ 1.98
CUEDC1-202ENST00000407144 KDM5AP29375 1690 aaKnown RBP27.4■■□□□ 1.98
CUEDC1-202ENST00000407144 TMEM63CQ9P1W3 806 aa27.4■■□□□ 1.98
CUEDC1-202ENST00000407144 PRPF40AO75400 957 aaKnown RBP27.39■■□□□ 1.98
CUEDC1-202ENST00000407144 MBD3O95983 291 aa27.39■■□□□ 1.98
CUEDC1-202ENST00000407144 TCP11L2Q8N4U5 519 aa27.39■■□□□ 1.98
CUEDC1-202ENST00000407144 RBM42Q9BTD8 480 aaKnown RBP27.39■■□□□ 1.98
CUEDC1-202ENST00000407144 BCL2L12Q9HB09 334 aa27.39■■□□□ 1.98
CUEDC1-202ENST00000407144 RBM27Q9P2N5 1060 aaKnown RBP27.39■■□□□ 1.97
CUEDC1-202ENST00000407144 FKBP5Q13451 457 aaPredicted RBP27.38■■□□□ 1.97
CUEDC1-202ENST00000407144 SYCE3A1L190 88 aa27.38■■□□□ 1.97
CUEDC1-202ENST00000407144 ANKRD7Q92527 254 aa27.38■■□□□ 1.97
CUEDC1-202ENST00000407144 NEO1Q92859 1461 aa27.37■■□□□ 1.97
CUEDC1-202ENST00000407144 ARAP3Q8WWN8 1544 aa27.37■■□□□ 1.97
CUEDC1-202ENST00000407144 TSC1Q92574 1164 aa27.37■■□□□ 1.97
CUEDC1-202ENST00000407144 JARID2Q92833 1246 aaPredicted RBP27.37■■□□□ 1.97
CUEDC1-202ENST00000407144 ZBTB40Q9NUA8 1239 aa27.37■■□□□ 1.97
CUEDC1-202ENST00000407144 AK9Q5TCS8 1911 aa27.37■■□□□ 1.97
CUEDC1-202ENST00000407144 MADDQ8WXG6 1647 aa27.36■■□□□ 1.97
CUEDC1-202ENST00000407144 TBC1D9Q6ZT07 1266 aa27.36■■□□□ 1.97
CUEDC1-202ENST00000407144 YEATS2Q9ULM3 1422 aa27.36■■□□□ 1.97
CUEDC1-202ENST00000407144 TRIM27P14373 513 aa27.35■■□□□ 1.97
CUEDC1-202ENST00000407144 CEP152O94986 1710 aa27.35■■□□□ 1.97
CUEDC1-202ENST00000407144 GABPB1Q06547 395 aaPredicted RBP27.34■■□□□ 1.97
CUEDC1-202ENST00000407144 UVSSAQ2YD98 709 aa27.34■■□□□ 1.97
CUEDC1-202ENST00000407144 CFAP44Q96MT7 982 aa27.34■■□□□ 1.97
CUEDC1-202ENST00000407144 LNPKQ9C0E8 428 aa27.34■■□□□ 1.97
CUEDC1-202ENST00000407144 ITPRIPQ8IWB1 547 aa27.33■■□□□ 1.97
CUEDC1-202ENST00000407144 TSPY26PQ9H489 355 aa27.33■■□□□ 1.97
CUEDC1-202ENST00000407144 ATF7IPQ6VMQ6 1270 aa27.33■■□□□ 1.97
CUEDC1-202ENST00000407144 NEUROD2Q15784 382 aa27.32■■□□□ 1.96
CUEDC1-202ENST00000407144 OGFRQ9NZT2 677 aa27.32■■□□□ 1.96
CUEDC1-202ENST00000407144 IQGAP3Q86VI3 1631 aa27.32■■□□□ 1.96
CUEDC1-202ENST00000407144 EFCAB2Q5VUJ9 269 aa27.32■■□□□ 1.96
CUEDC1-202ENST00000407144 DIAPH3Q9NSV4 1193 aa27.32■■□□□ 1.96
CUEDC1-202ENST00000407144 RAPGEF3O95398 923 aa27.31■■□□□ 1.96
CUEDC1-202ENST00000407144 RRP7AQ9Y3A4 280 aaKnown RBP27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms