RNA–Protein interactions for RNA: ENST00000407067.1

MDK-206, Transcript of midkine, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene MDK, Length 1,026 nt, Biotype protein coding, Subcellular localisation Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDK-206ENST00000407067 HAP1P54257 671 aaPredicted RBP33.81■■■■□ 3
MDK-206ENST00000407067 PHRF1Q9P1Y6 1649 aaKnown RBP33.81■■■■□ 3
MDK-206ENST00000407067 CDK12Q9NYV4 1490 aaPredicted RBP33.8■■■■□ 3
MDK-206ENST00000407067 PAK3O75914 559 aaPredicted RBP33.79■■■■□ 3
MDK-206ENST00000407067 CABLES1Q8TDN4 633 aa33.79■■■■□ 3
MDK-206ENST00000407067 BRD4O60885 1362 aaPredicted RBP33.78■■■■□ 3
MDK-206ENST00000407067 ATAD2Q6PL18 1390 aa33.78■■■■□ 3
MDK-206ENST00000407067 CCER1Q8TC90 406 aaPredicted RBP33.78■■■■□ 3
MDK-206ENST00000407067 USP21Q9UK80 565 aa33.78■■■■□ 3
MDK-206ENST00000407067 SLIT2O94813 1529 aa33.78■■■■□ 3
MDK-206ENST00000407067 RXRBP28702 533 aa33.77■■■■□ 3
MDK-206ENST00000407067 BCL9LQ86UU0 1499 aa33.76■■■□□ 2.99
MDK-206ENST00000407067 QTRT2Q9H974 415 aaKnown RBP33.75■■■□□ 2.99
MDK-206ENST00000407067 CABP1Q9NZU7 370 aa33.75■■■□□ 2.99
MDK-206ENST00000407067 ATRNO75882 1429 aa33.75■■■□□ 2.99
MDK-206ENST00000407067 COL14A1Q05707 1796 aaKnown RBP33.73■■■□□ 2.99
MDK-206ENST00000407067 USP6P35125 1406 aa33.73■■■□□ 2.99
MDK-206ENST00000407067 RBM6P78332 1123 aaKnown RBP33.72■■■□□ 2.99
MDK-206ENST00000407067 TRPC5Q9UL62 973 aaPredicted RBP33.72■■■□□ 2.99
MDK-206ENST00000407067 MON2Q7Z3U7 1717 aa33.71■■■□□ 2.99
MDK-206ENST00000407067 PLEKHG5O94827 1062 aa33.71■■■□□ 2.99
MDK-206ENST00000407067 NRKQ7Z2Y5 1582 aa33.69■■■□□ 2.98
MDK-206ENST00000407067 NRAPQ86VF7 1730 aa33.69■■■□□ 2.98
MDK-206ENST00000407067 USP47Q96K76 1375 aa33.67■■■□□ 2.98
MDK-206ENST00000407067 PIK3C2AO00443 1686 aa33.65■■■□□ 2.98
MDK-206ENST00000407067 RGS12O14924 1447 aa33.65■■■□□ 2.98
MDK-206ENST00000407067 SSH2Q76I76 1423 aa33.65■■■□□ 2.98
MDK-206ENST00000407067 ST20-MTHFSA0A0A6YYL1 179 aa33.65■■■□□ 2.98
MDK-206ENST00000407067 SLC24A1O60721 1099 aa33.65■■■□□ 2.98
MDK-206ENST00000407067 CPSF1Q10570 1443 aaKnown RBP33.64■■■□□ 2.98
MDK-206ENST00000407067 UNC5CLQ8IV45 518 aa33.64■■■□□ 2.98
MDK-206ENST00000407067 PUS7Q96PZ0 661 aaKnown RBP33.64■■■□□ 2.98
MDK-206ENST00000407067 TESK2Q96S53 571 aa33.64■■■□□ 2.98
MDK-206ENST00000407067 ABTB2Q8N961 1025 aa33.63■■■□□ 2.97
MDK-206ENST00000407067 ZNF692Q9BU19 519 aaPredicted RBP33.63■■■□□ 2.97
MDK-206ENST00000407067 USP19O94966 1318 aa33.6■■■□□ 2.97
MDK-206ENST00000407067 GLI3P10071 1580 aa33.6■■■□□ 2.97
MDK-206ENST00000407067 NUTM2GQ5VZR2 741 aa33.59■■■□□ 2.97
MDK-206ENST00000407067 FAM83GA6ND36 823 aa33.58■■■□□ 2.97
MDK-206ENST00000407067 NLRP13Q86W25 1043 aa33.57■■■□□ 2.96
MDK-206ENST00000407067 SLIT3O75094 1523 aa33.57■■■□□ 2.96
MDK-206ENST00000407067 CD163L1Q9NR16 1453 aa33.56■■■□□ 2.96
MDK-206ENST00000407067 KTN1Q86UP2 1357 aaKnown RBP33.56■■■□□ 2.96
MDK-206ENST00000407067 GJD4Q96KN9 370 aaPredicted RBP33.55■■■□□ 2.96
MDK-206ENST00000407067 USP54Q70EL1 1684 aa33.55■■■□□ 2.96
MDK-206ENST00000407067 KIAA0232Q92628 1395 aa33.54■■■□□ 2.96
MDK-206ENST00000407067 NINLQ9Y2I6 1382 aa33.54■■■□□ 2.96
MDK-206ENST00000407067 TTC21AQ8NDW8 1320 aa33.53■■■□□ 2.96
MDK-206ENST00000407067 PRDM11Q9NQV5 511 aa33.53■■■□□ 2.96
MDK-206ENST00000407067 TTC21BQ7Z4L5 1316 aa33.53■■■□□ 2.96
MDK-206ENST00000407067 VPS72Q15906 364 aa33.52■■■□□ 2.96
MDK-206ENST00000407067 LMO7Q8WWI1 1683 aa33.51■■■□□ 2.95
MDK-206ENST00000407067 CPDO75976 1380 aa33.5■■■□□ 2.95
MDK-206ENST00000407067 TMC1Q8TDI8 760 aa33.5■■■□□ 2.95
MDK-206ENST00000407067 BTG4Q9NY30 223 aa33.5■■■□□ 2.95
MDK-206ENST00000407067 TMF1P82094 1093 aa33.49■■■□□ 2.95
MDK-206ENST00000407067 NLRP6P59044 892 aa33.48■■■□□ 2.95
MDK-206ENST00000407067 ZC3H6P61129 1189 aaKnown RBP33.47■■■□□ 2.95
MDK-206ENST00000407067 HDGFL2Q7Z4V5 671 aaPredicted RBP33.47■■■□□ 2.95
MDK-206ENST00000407067 SLC12A5Q9H2X9 1139 aa33.47■■■□□ 2.95
MDK-206ENST00000407067 GCP02774 474 aa33.46■■■□□ 2.95
MDK-206ENST00000407067 BRWD3Q6RI45 1802 aa33.46■■■□□ 2.95
MDK-206ENST00000407067 TERF2IPQ9NYB0 399 aa33.45■■■□□ 2.95
MDK-206ENST00000407067 A0A1W2PP64 1363 aa33.45■■■□□ 2.94
MDK-206ENST00000407067 EDC4Q6P2E9 1401 aaKnown RBP33.45■■■□□ 2.94
MDK-206ENST00000407067 CHRNA2Q15822 529 aa33.42■■■□□ 2.94
MDK-206ENST00000407067 CCDC9Q9Y3X0 531 aaKnown RBP33.41■■■□□ 2.94
MDK-206ENST00000407067 MYOM1P52179 1685 aa33.41■■■□□ 2.94
MDK-206ENST00000407067 CAMTA1Q9Y6Y1 1673 aa33.4■■■□□ 2.94
MDK-206ENST00000407067 CDCA8Q53HL2 280 aa33.4■■■□□ 2.94
MDK-206ENST00000407067 COL18A1P39060 1754 aa33.39■■■□□ 2.94
MDK-206ENST00000407067 USP31Q70CQ4 1352 aa33.39■■■□□ 2.94
MDK-206ENST00000407067 NFAT5O94916 1531 aa33.37■■■□□ 2.93
MDK-206ENST00000407067 ANKRD36BQ8N2N9 1353 aa33.36■■■□□ 2.93
MDK-206ENST00000407067 KCNH5Q8NCM2 988 aa33.36■■■□□ 2.93
MDK-206ENST00000407067 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.35■■■□□ 2.93
MDK-206ENST00000407067 SPATA31A5Q5VU36 1347 aa33.34■■■□□ 2.93
MDK-206ENST00000407067 SPATA31A7Q8IWB4 1347 aa33.34■■■□□ 2.93
MDK-206ENST00000407067 UPF1Q92900 1129 aaKnown RBP eCLIP33.34■■■□□ 2.93
MDK-206ENST00000407067 THSD7AQ9UPZ6 1657 aa33.33■■■□□ 2.93
MDK-206ENST00000407067 ONECUT3O60422 494 aaPredicted RBP33.33■■■□□ 2.93
MDK-206ENST00000407067 RGPD5Q99666 1765 aa33.33■■■□□ 2.93
MDK-206ENST00000407067 AATKQ6ZMQ8 1374 aa33.33■■■□□ 2.93
MDK-206ENST00000407067 LTN1O94822 1766 aa33.32■■■□□ 2.92
MDK-206ENST00000407067 ABCC6O95255 1503 aa33.32■■■□□ 2.92
MDK-206ENST00000407067 COL5A2P05997 1499 aaPredicted RBP33.31■■■□□ 2.92
MDK-206ENST00000407067 EIF4G2P78344 907 aaKnown RBP eCLIP33.31■■■□□ 2.92
MDK-206ENST00000407067 NME9Q86XW9 330 aa33.3■■■□□ 2.92
MDK-206ENST00000407067 STRN4Q9NRL3 753 aa33.3■■■□□ 2.92
MDK-206ENST00000407067 OVOS2A0A0J9YW53 1432 aa33.29■■■□□ 2.92
MDK-206ENST00000407067 OVOS2Q6IE36 1432 aa33.29■■■□□ 2.92
MDK-206ENST00000407067 SEPT12Q8IYM1 358 aa33.29■■■□□ 2.92
MDK-206ENST00000407067 KIF20BQ96Q89 1820 aa33.28■■■□□ 2.92
MDK-206ENST00000407067 SPATA31A1Q5TZJ5 1347 aa33.28■■■□□ 2.92
MDK-206ENST00000407067 EVA1CP58658 441 aa33.26■■■□□ 2.91
MDK-206ENST00000407067 ARHGEF25Q86VW2 580 aa33.26■■■□□ 2.91
MDK-206ENST00000407067 ZRANB1Q9UGI0 708 aa33.26■■■□□ 2.91
MDK-206ENST00000407067 ZBTB7CA1YPR0 619 aa33.25■■■□□ 2.91
MDK-206ENST00000407067 FAM98CQ17RN3 349 aaKnown RBP33.25■■■□□ 2.91
MDK-206ENST00000407067 HSPA5P11021 654 aaKnown RBP33.24■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms