RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 TNFRSF10AO00220 468 aa10.16□□□□□ -0.78
HMGB1P13-201ENST00000406019 GFRA3O60609 400 aa10.16□□□□□ -0.78
HMGB1P13-201ENST00000406019 ZNF511Q8NB15 262 aa10.16□□□□□ -0.78
HMGB1P13-201ENST00000406019 BAP1Q92560 729 aa10.16□□□□□ -0.78
HMGB1P13-201ENST00000406019 TOR4AQ9NXH8 423 aa10.16□□□□□ -0.78
HMGB1P13-201ENST00000406019 CTHP32929 405 aa10.15□□□□□ -0.78
HMGB1P13-201ENST00000406019 TMEM259Q4ZIN3 620 aa10.15□□□□□ -0.78
HMGB1P13-201ENST00000406019 EPS8L1Q8TE68 723 aa10.15□□□□□ -0.78
HMGB1P13-201ENST00000406019 TRIM34Q9BYJ4 488 aa10.15□□□□□ -0.78
HMGB1P13-201ENST00000406019 FOXC1Q12948 553 aa10.14□□□□□ -0.79
HMGB1P13-201ENST00000406019 LINC01559Q495D7 138 aa10.14□□□□□ -0.79
HMGB1P13-201ENST00000406019 RC3H1Q5TC82 1133 aaKnown RBP10.14□□□□□ -0.79
HMGB1P13-201ENST00000406019 MRGPRX2Q96LB1 330 aa10.14□□□□□ -0.79
HMGB1P13-201ENST00000406019 SIAH2O43255 324 aa10.13□□□□□ -0.79
HMGB1P13-201ENST00000406019 LAPTM4AQ15012 233 aa10.13□□□□□ -0.79
HMGB1P13-201ENST00000406019 NR6A1Q15406 480 aa10.13□□□□□ -0.79
HMGB1P13-201ENST00000406019 C4orf48Q5BLP8 95 aa10.13□□□□□ -0.79
HMGB1P13-201ENST00000406019 GJD4Q96KN9 370 aaPredicted RBP10.13□□□□□ -0.79
HMGB1P13-201ENST00000406019 SOCS7O14512 581 aa10.12□□□□□ -0.79
HMGB1P13-201ENST00000406019 GPR37L1O60883 481 aa10.12□□□□□ -0.79
HMGB1P13-201ENST00000406019 BANK1Q8NDB2 785 aa10.12□□□□□ -0.79
HMGB1P13-201ENST00000406019 SH3BP5LQ7L8J4 393 aa10.11□□□□□ -0.79
HMGB1P13-201ENST00000406019 SH3RF1Q7Z6J0 888 aa10.11□□□□□ -0.79
HMGB1P13-201ENST00000406019 ATP1B4Q9UN42 357 aaPredicted RBP10.11□□□□□ -0.79
HMGB1P13-201ENST00000406019 MTMR14Q8NCE2 650 aa10.1□□□□□ -0.79
HMGB1P13-201ENST00000406019 FOXJ1Q92949 421 aa10.1□□□□□ -0.79
HMGB1P13-201ENST00000406019 OCSTAMPQ9BR26 566 aa10.09□□□□□ -0.79
HMGB1P13-201ENST00000406019 C1QTNF2Q9BXJ5 285 aa10.09□□□□□ -0.79
HMGB1P13-201ENST00000406019 TIMELESSQ9UNS1 1208 aa10.09□□□□□ -0.79
HMGB1P13-201ENST00000406019 GTF3C3Q9Y5Q9 886 aa10.09□□□□□ -0.79
HMGB1P13-201ENST00000406019 TMEM132AQ24JP5 1023 aa10.08□□□□□ -0.8
HMGB1P13-201ENST00000406019 ARMC2Q8NEN0 867 aa10.08□□□□□ -0.8
HMGB1P13-201ENST00000406019 SNRKQ9NRH2 765 aa10.08□□□□□ -0.8
HMGB1P13-201ENST00000406019 FKBPLQ9UIM3 349 aa10.08□□□□□ -0.8
HMGB1P13-201ENST00000406019 SMPD1P17405 629 aa10.07□□□□□ -0.8
HMGB1P13-201ENST00000406019 GPKOWQ92917 476 aaPredicted RBP eCLIP10.07□□□□□ -0.8
HMGB1P13-201ENST00000406019 ZC3H4Q9UPT8 1303 aaKnown RBP10.07□□□□□ -0.8
HMGB1P13-201ENST00000406019 MPNDQ8N594 471 aa10.06□□□□□ -0.8
HMGB1P13-201ENST00000406019 SNIP1Q8TAD8 396 aaKnown RBP10.06□□□□□ -0.8
HMGB1P13-201ENST00000406019 J3QL48 77 aa10.05□□□□□ -0.8
HMGB1P13-201ENST00000406019 VARSP26640 1264 aaKnown RBP10.05□□□□□ -0.8
HMGB1P13-201ENST00000406019 NBPF14Q5TI25 921 aa10.05□□□□□ -0.8
HMGB1P13-201ENST00000406019 EHBP1Q8NDI1 1231 aa10.05□□□□□ -0.8
HMGB1P13-201ENST00000406019 DGAT1O75907 488 aa10.04□□□□□ -0.8
HMGB1P13-201ENST00000406019 PDXDC2PQ6P474 469 aa10.04□□□□□ -0.8
HMGB1P13-201ENST00000406019 CYP4X1Q8N118 509 aa10.04□□□□□ -0.8
HMGB1P13-201ENST00000406019 AVPP01185 164 aa10.03□□□□□ -0.8
HMGB1P13-201ENST00000406019 TLL2Q9Y6L7 1015 aa10.03□□□□□ -0.8
HMGB1P13-201ENST00000406019 BPHLQ86WA6 291 aaPredicted RBP10.02□□□□□ -0.81
HMGB1P13-201ENST00000406019 CDK15Q96Q40 435 aa10.02□□□□□ -0.81
HMGB1P13-201ENST00000406019 FAM187AA6NFU0 413 aa10.01□□□□□ -0.81
HMGB1P13-201ENST00000406019 MYT1Q01538 1121 aa10.01□□□□□ -0.81
HMGB1P13-201ENST00000406019 Q6ZNB5 142 aa10.01□□□□□ -0.81
HMGB1P13-201ENST00000406019 TRMT44Q8IYL2 757 aaKnown RBP10.01□□□□□ -0.81
HMGB1P13-201ENST00000406019 MCM6Q14566 821 aa10□□□□□ -0.81
HMGB1P13-201ENST00000406019 GPSM3Q9Y4H4 160 aa10□□□□□ -0.81
HMGB1P13-201ENST00000406019 TTC24A2A3L6 582 aaPredicted RBP9.99□□□□□ -0.81
HMGB1P13-201ENST00000406019 ERFEQ4G0M1 354 aa9.99□□□□□ -0.81
HMGB1P13-201ENST00000406019 CRIPAKQ8N1N5 446 aa9.99□□□□□ -0.81
HMGB1P13-201ENST00000406019 FAM174AQ8TBP5 190 aa9.99□□□□□ -0.81
HMGB1P13-201ENST00000406019 ERICH6Q7L0X2 663 aa9.98□□□□□ -0.81
HMGB1P13-201ENST00000406019 ALDH1A1P00352 501 aa9.97□□□□□ -0.81
HMGB1P13-201ENST00000406019 PKDCCQ504Y2 493 aa9.97□□□□□ -0.81
HMGB1P13-201ENST00000406019 TRAF7Q6Q0C0 670 aa9.97□□□□□ -0.81
HMGB1P13-201ENST00000406019 HPS1Q92902 700 aa9.97□□□□□ -0.81
HMGB1P13-201ENST00000406019 MAP4K5Q9Y4K4 846 aa9.97□□□□□ -0.81
HMGB1P13-201ENST00000406019 GRM5P41594 1212 aa9.96□□□□□ -0.82
HMGB1P13-201ENST00000406019 SMCPP49901 116 aaPredicted RBP9.96□□□□□ -0.82
HMGB1P13-201ENST00000406019 ARHGAP9Q9BRR9 750 aa9.96□□□□□ -0.82
HMGB1P13-201ENST00000406019 NDUFB9Q9Y6M9 179 aa9.95□□□□□ -0.82
HMGB1P13-201ENST00000406019 MAGEB6P1A0A0J9YX57 407 aa9.94□□□□□ -0.82
HMGB1P13-201ENST00000406019 ADH1CP00326 375 aa9.94□□□□□ -0.82
HMGB1P13-201ENST00000406019 PTK2Q05397 1052 aa9.94□□□□□ -0.82
HMGB1P13-201ENST00000406019 AGERQ15109 404 aa9.94□□□□□ -0.82
HMGB1P13-201ENST00000406019 ADAM32Q8TC27 787 aa9.94□□□□□ -0.82
HMGB1P13-201ENST00000406019 KLF16Q9BXK1 252 aaPredicted RBP9.94□□□□□ -0.82
HMGB1P13-201ENST00000406019 CARD14Q9BXL6 1004 aa9.94□□□□□ -0.82
HMGB1P13-201ENST00000406019 AAASQ9NRG9 546 aa9.94□□□□□ -0.82
HMGB1P13-201ENST00000406019 TBC1D2BQ9UPU7 963 aa9.94□□□□□ -0.82
HMGB1P13-201ENST00000406019 ST8SIA5O15466 376 aa9.93□□□□□ -0.82
HMGB1P13-201ENST00000406019 FBXO45P0C2W1 286 aa9.93□□□□□ -0.82
HMGB1P13-201ENST00000406019 IRF5Q13568 498 aa9.93□□□□□ -0.82
HMGB1P13-201ENST00000406019 NR3C2P08235 984 aa9.92□□□□□ -0.82
HMGB1P13-201ENST00000406019 PNMA1Q8ND90 353 aa9.92□□□□□ -0.82
HMGB1P13-201ENST00000406019 CTC1Q2NKJ3 1217 aa9.91□□□□□ -0.82
HMGB1P13-201ENST00000406019 ZBBXA8MT70 800 aa9.9□□□□□ -0.82
HMGB1P13-201ENST00000406019 NNTQ13423 1086 aa9.9□□□□□ -0.82
HMGB1P13-201ENST00000406019 DACH1Q9UI36 760 aa9.9□□□□□ -0.82
HMGB1P13-201ENST00000406019 APBB1O00213 710 aa9.89□□□□□ -0.83
HMGB1P13-201ENST00000406019 NR5A1Q13285 461 aa9.88□□□□□ -0.83
HMGB1P13-201ENST00000406019 ZBTB33Q86T24 672 aa9.88□□□□□ -0.83
HMGB1P13-201ENST00000406019 WASF2Q9Y6W5 498 aa9.88□□□□□ -0.83
HMGB1P13-201ENST00000406019 ESPNB1AK53 854 aa9.87□□□□□ -0.83
HMGB1P13-201ENST00000406019 TIMP2P16035 220 aa9.87□□□□□ -0.83
HMGB1P13-201ENST00000406019 FSHRP23945 695 aa9.87□□□□□ -0.83
HMGB1P13-201ENST00000406019 NR1H3Q13133 447 aa9.87□□□□□ -0.83
HMGB1P13-201ENST00000406019 COG6Q9Y2V7 657 aa9.87□□□□□ -0.83
HMGB1P13-201ENST00000406019 ARID5BQ14865 1188 aa9.86□□□□□ -0.83
HMGB1P13-201ENST00000406019 VASH1Q7L8A9 365 aaPredicted RBP9.86□□□□□ -0.83
HMGB1P13-201ENST00000406019 SLC10A4Q96EP9 437 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms