RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 TNFRSF10AO00220 468 aa10.16□□□□□ -0.78
HMGB1P13-201ENST00000406019 GFRA3O60609 400 aa10.16□□□□□ -0.78
HMGB1P13-201ENST00000406019 ZNF511Q8NB15 262 aa10.16□□□□□ -0.78
HMGB1P13-201ENST00000406019 BAP1Q92560 729 aa10.16□□□□□ -0.78
HMGB1P13-201ENST00000406019 TOR4AQ9NXH8 423 aa10.16□□□□□ -0.78
HMGB1P13-201ENST00000406019 CTHP32929 405 aa10.15□□□□□ -0.78
HMGB1P13-201ENST00000406019 TMEM259Q4ZIN3 620 aa10.15□□□□□ -0.78
HMGB1P13-201ENST00000406019 EPS8L1Q8TE68 723 aa10.15□□□□□ -0.78
HMGB1P13-201ENST00000406019 TRIM34Q9BYJ4 488 aa10.15□□□□□ -0.78
HMGB1P13-201ENST00000406019 FOXC1Q12948 553 aa10.14□□□□□ -0.79
HMGB1P13-201ENST00000406019 LINC01559Q495D7 138 aa10.14□□□□□ -0.79
HMGB1P13-201ENST00000406019 RC3H1Q5TC82 1133 aaKnown RBP10.14□□□□□ -0.79
HMGB1P13-201ENST00000406019 MRGPRX2Q96LB1 330 aa10.14□□□□□ -0.79
HMGB1P13-201ENST00000406019 SIAH2O43255 324 aa10.13□□□□□ -0.79
HMGB1P13-201ENST00000406019 LAPTM4AQ15012 233 aa10.13□□□□□ -0.79
HMGB1P13-201ENST00000406019 NR6A1Q15406 480 aa10.13□□□□□ -0.79
HMGB1P13-201ENST00000406019 C4orf48Q5BLP8 95 aa10.13□□□□□ -0.79
HMGB1P13-201ENST00000406019 GJD4Q96KN9 370 aaPredicted RBP10.13□□□□□ -0.79
HMGB1P13-201ENST00000406019 SOCS7O14512 581 aa10.12□□□□□ -0.79
HMGB1P13-201ENST00000406019 GPR37L1O60883 481 aa10.12□□□□□ -0.79
HMGB1P13-201ENST00000406019 BANK1Q8NDB2 785 aa10.12□□□□□ -0.79
HMGB1P13-201ENST00000406019 SH3BP5LQ7L8J4 393 aa10.11□□□□□ -0.79
HMGB1P13-201ENST00000406019 SH3RF1Q7Z6J0 888 aa10.11□□□□□ -0.79
HMGB1P13-201ENST00000406019 ATP1B4Q9UN42 357 aaPredicted RBP10.11□□□□□ -0.79
HMGB1P13-201ENST00000406019 MTMR14Q8NCE2 650 aa10.1□□□□□ -0.79
HMGB1P13-201ENST00000406019 FOXJ1Q92949 421 aa10.1□□□□□ -0.79
HMGB1P13-201ENST00000406019 OCSTAMPQ9BR26 566 aa10.09□□□□□ -0.79
HMGB1P13-201ENST00000406019 C1QTNF2Q9BXJ5 285 aa10.09□□□□□ -0.79
HMGB1P13-201ENST00000406019 TIMELESSQ9UNS1 1208 aa10.09□□□□□ -0.79
HMGB1P13-201ENST00000406019 GTF3C3Q9Y5Q9 886 aa10.09□□□□□ -0.79
HMGB1P13-201ENST00000406019 TMEM132AQ24JP5 1023 aa10.08□□□□□ -0.8
HMGB1P13-201ENST00000406019 ARMC2Q8NEN0 867 aa10.08□□□□□ -0.8
HMGB1P13-201ENST00000406019 SNRKQ9NRH2 765 aa10.08□□□□□ -0.8
HMGB1P13-201ENST00000406019 FKBPLQ9UIM3 349 aa10.08□□□□□ -0.8
HMGB1P13-201ENST00000406019 SMPD1P17405 629 aa10.07□□□□□ -0.8
HMGB1P13-201ENST00000406019 GPKOWQ92917 476 aaPredicted RBP eCLIP10.07□□□□□ -0.8
HMGB1P13-201ENST00000406019 ZC3H4Q9UPT8 1303 aaKnown RBP10.07□□□□□ -0.8
HMGB1P13-201ENST00000406019 MPNDQ8N594 471 aa10.06□□□□□ -0.8
HMGB1P13-201ENST00000406019 SNIP1Q8TAD8 396 aaKnown RBP10.06□□□□□ -0.8
HMGB1P13-201ENST00000406019 J3QL48 77 aa10.05□□□□□ -0.8
HMGB1P13-201ENST00000406019 VARSP26640 1264 aaKnown RBP10.05□□□□□ -0.8
HMGB1P13-201ENST00000406019 NBPF14Q5TI25 921 aa10.05□□□□□ -0.8
HMGB1P13-201ENST00000406019 EHBP1Q8NDI1 1231 aa10.05□□□□□ -0.8
HMGB1P13-201ENST00000406019 DGAT1O75907 488 aa10.04□□□□□ -0.8
HMGB1P13-201ENST00000406019 PDXDC2PQ6P474 469 aa10.04□□□□□ -0.8
HMGB1P13-201ENST00000406019 CYP4X1Q8N118 509 aa10.04□□□□□ -0.8
HMGB1P13-201ENST00000406019 AVPP01185 164 aa10.03□□□□□ -0.8
HMGB1P13-201ENST00000406019 TLL2Q9Y6L7 1015 aa10.03□□□□□ -0.8
HMGB1P13-201ENST00000406019 BPHLQ86WA6 291 aaPredicted RBP10.02□□□□□ -0.81
HMGB1P13-201ENST00000406019 CDK15Q96Q40 435 aa10.02□□□□□ -0.81
HMGB1P13-201ENST00000406019 FAM187AA6NFU0 413 aa10.01□□□□□ -0.81
HMGB1P13-201ENST00000406019 MYT1Q01538 1121 aa10.01□□□□□ -0.81
HMGB1P13-201ENST00000406019 Q6ZNB5 142 aa10.01□□□□□ -0.81
HMGB1P13-201ENST00000406019 TRMT44Q8IYL2 757 aaKnown RBP10.01□□□□□ -0.81
HMGB1P13-201ENST00000406019 MCM6Q14566 821 aa10□□□□□ -0.81
HMGB1P13-201ENST00000406019 GPSM3Q9Y4H4 160 aa10□□□□□ -0.81
HMGB1P13-201ENST00000406019 TTC24A2A3L6 582 aaPredicted RBP9.99□□□□□ -0.81
HMGB1P13-201ENST00000406019 ERFEQ4G0M1 354 aa9.99□□□□□ -0.81
HMGB1P13-201ENST00000406019 CRIPAKQ8N1N5 446 aa9.99□□□□□ -0.81
HMGB1P13-201ENST00000406019 FAM174AQ8TBP5 190 aa9.99□□□□□ -0.81
HMGB1P13-201ENST00000406019 ERICH6Q7L0X2 663 aa9.98□□□□□ -0.81
HMGB1P13-201ENST00000406019 ALDH1A1P00352 501 aa9.97□□□□□ -0.81
HMGB1P13-201ENST00000406019 PKDCCQ504Y2 493 aa9.97□□□□□ -0.81
HMGB1P13-201ENST00000406019 TRAF7Q6Q0C0 670 aa9.97□□□□□ -0.81
HMGB1P13-201ENST00000406019 HPS1Q92902 700 aa9.97□□□□□ -0.81
HMGB1P13-201ENST00000406019 MAP4K5Q9Y4K4 846 aa9.97□□□□□ -0.81
HMGB1P13-201ENST00000406019 GRM5P41594 1212 aa9.96□□□□□ -0.82
HMGB1P13-201ENST00000406019 SMCPP49901 116 aaPredicted RBP9.96□□□□□ -0.82
HMGB1P13-201ENST00000406019 ARHGAP9Q9BRR9 750 aa9.96□□□□□ -0.82
HMGB1P13-201ENST00000406019 NDUFB9Q9Y6M9 179 aa9.95□□□□□ -0.82
HMGB1P13-201ENST00000406019 MAGEB6P1A0A0J9YX57 407 aa9.94□□□□□ -0.82
HMGB1P13-201ENST00000406019 ADH1CP00326 375 aa9.94□□□□□ -0.82
HMGB1P13-201ENST00000406019 PTK2Q05397 1052 aa9.94□□□□□ -0.82
HMGB1P13-201ENST00000406019 AGERQ15109 404 aa9.94□□□□□ -0.82
HMGB1P13-201ENST00000406019 ADAM32Q8TC27 787 aa9.94□□□□□ -0.82
HMGB1P13-201ENST00000406019 KLF16Q9BXK1 252 aaPredicted RBP9.94□□□□□ -0.82
HMGB1P13-201ENST00000406019 CARD14Q9BXL6 1004 aa9.94□□□□□ -0.82
HMGB1P13-201ENST00000406019 AAASQ9NRG9 546 aa9.94□□□□□ -0.82
HMGB1P13-201ENST00000406019 TBC1D2BQ9UPU7 963 aa9.94□□□□□ -0.82
HMGB1P13-201ENST00000406019 ST8SIA5O15466 376 aa9.93□□□□□ -0.82
HMGB1P13-201ENST00000406019 FBXO45P0C2W1 286 aa9.93□□□□□ -0.82
HMGB1P13-201ENST00000406019 IRF5Q13568 498 aa9.93□□□□□ -0.82
HMGB1P13-201ENST00000406019 NR3C2P08235 984 aa9.92□□□□□ -0.82
HMGB1P13-201ENST00000406019 PNMA1Q8ND90 353 aa9.92□□□□□ -0.82
HMGB1P13-201ENST00000406019 CTC1Q2NKJ3 1217 aa9.91□□□□□ -0.82
HMGB1P13-201ENST00000406019 ZBBXA8MT70 800 aa9.9□□□□□ -0.82
HMGB1P13-201ENST00000406019 NNTQ13423 1086 aa9.9□□□□□ -0.82
HMGB1P13-201ENST00000406019 DACH1Q9UI36 760 aa9.9□□□□□ -0.82
HMGB1P13-201ENST00000406019 APBB1O00213 710 aa9.89□□□□□ -0.83
HMGB1P13-201ENST00000406019 NR5A1Q13285 461 aa9.88□□□□□ -0.83
HMGB1P13-201ENST00000406019 ZBTB33Q86T24 672 aa9.88□□□□□ -0.83
HMGB1P13-201ENST00000406019 WASF2Q9Y6W5 498 aa9.88□□□□□ -0.83
HMGB1P13-201ENST00000406019 ESPNB1AK53 854 aa9.87□□□□□ -0.83
HMGB1P13-201ENST00000406019 TIMP2P16035 220 aa9.87□□□□□ -0.83
HMGB1P13-201ENST00000406019 FSHRP23945 695 aa9.87□□□□□ -0.83
HMGB1P13-201ENST00000406019 NR1H3Q13133 447 aa9.87□□□□□ -0.83
HMGB1P13-201ENST00000406019 COG6Q9Y2V7 657 aa9.87□□□□□ -0.83
HMGB1P13-201ENST00000406019 ARID5BQ14865 1188 aa9.86□□□□□ -0.83
HMGB1P13-201ENST00000406019 VASH1Q7L8A9 365 aaPredicted RBP9.86□□□□□ -0.83
HMGB1P13-201ENST00000406019 SLC10A4Q96EP9 437 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms