RNA–Protein interactions for RNA: ENST00000405600.5

CGREF1-206, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS P2 TSL 4 BASIC

Gene CGREF1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-206ENST00000405600 UNC5CLQ8IV45 518 aa23.2■■□□□ 1.3
CGREF1-206ENST00000405600 CCDC9Q9Y3X0 531 aaKnown RBP23.2■■□□□ 1.3
CGREF1-206ENST00000405600 ATRNO75882 1429 aa23.19■■□□□ 1.3
CGREF1-206ENST00000405600 GJD4Q96KN9 370 aaPredicted RBP23.18■■□□□ 1.3
CGREF1-206ENST00000405600 NUTM2GQ5VZR2 741 aa23.17■■□□□ 1.3
CGREF1-206ENST00000405600 CABP2Q9NPB3 220 aa23.17■■□□□ 1.3
CGREF1-206ENST00000405600 ATP7BP35670 1465 aa23.17■■□□□ 1.3
CGREF1-206ENST00000405600 ITSN1Q15811 1721 aa23.17■■□□□ 1.3
CGREF1-206ENST00000405600 CCDC61Q9Y6R9 512 aa23.16■■□□□ 1.3
CGREF1-206ENST00000405600 TRPM3Q9HCF6 1732 aaPredicted RBP23.15■■□□□ 1.3
CGREF1-206ENST00000405600 ACEP12821 1306 aa23.15■■□□□ 1.3
CGREF1-206ENST00000405600 EVC2Q86UK5 1308 aa23.15■■□□□ 1.3
CGREF1-206ENST00000405600 FAM83GA6ND36 823 aa23.14■■□□□ 1.3
CGREF1-206ENST00000405600 SLIT2O94813 1529 aa23.13■■□□□ 1.29
CGREF1-206ENST00000405600 SBNO2Q9Y2G9 1366 aa23.13■■□□□ 1.29
CGREF1-206ENST00000405600 ABCA3Q99758 1704 aa23.12■■□□□ 1.29
CGREF1-206ENST00000405600 QRICH2Q9H0J4 1663 aa23.11■■□□□ 1.29
CGREF1-206ENST00000405600 DDX10Q13206 875 aaKnown RBP23.1■■□□□ 1.29
CGREF1-206ENST00000405600 BTG4Q9NY30 223 aa23.1■■□□□ 1.29
CGREF1-206ENST00000405600 ALS2Q96Q42 1657 aa23.1■■□□□ 1.29
CGREF1-206ENST00000405600 A0A0G2JS52 829 aa23.09■■□□□ 1.29
CGREF1-206ENST00000405600 SLC24A1O60721 1099 aa23.09■■□□□ 1.29
CGREF1-206ENST00000405600 MYT1Q01538 1121 aa23.09■■□□□ 1.29
CGREF1-206ENST00000405600 PLCH1Q4KWH8 1693 aa23.09■■□□□ 1.29
CGREF1-206ENST00000405600 PLEKHG3A1L390 1219 aa23.08■■□□□ 1.29
CGREF1-206ENST00000405600 ATAD2Q6PL18 1390 aa23.08■■□□□ 1.29
CGREF1-206ENST00000405600 PPIP5K1Q6PFW1 1433 aa23.08■■□□□ 1.29
CGREF1-206ENST00000405600 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.08■■□□□ 1.29
CGREF1-206ENST00000405600 ABTB2Q8N961 1025 aa23.08■■□□□ 1.28
CGREF1-206ENST00000405600 PRDM11Q9NQV5 511 aa23.08■■□□□ 1.28
CGREF1-206ENST00000405600 CCDC7Q96M83 1385 aa23.07■■□□□ 1.28
CGREF1-206ENST00000405600 VPS72Q15906 364 aa23.07■■□□□ 1.28
CGREF1-206ENST00000405600 CABP1Q9NZU7 370 aa23.07■■□□□ 1.28
CGREF1-206ENST00000405600 POLR3AO14802 1390 aaPredicted RBP23.06■■□□□ 1.28
CGREF1-206ENST00000405600 WASHC2AQ641Q2 1341 aa23.06■■□□□ 1.28
CGREF1-206ENST00000405600 ZC3H6P61129 1189 aaKnown RBP23.06■■□□□ 1.28
CGREF1-206ENST00000405600 TOPAZ1Q8N9V7 1692 aa23.05■■□□□ 1.28
CGREF1-206ENST00000405600 ST20-MTHFSA0A0A6YYL1 179 aa23.05■■□□□ 1.28
CGREF1-206ENST00000405600 CHRNA2Q15822 529 aa23.05■■□□□ 1.28
CGREF1-206ENST00000405600 GLI3P10071 1580 aa23.04■■□□□ 1.28
CGREF1-206ENST00000405600 SEPT12Q8IYM1 358 aa23.04■■□□□ 1.28
CGREF1-206ENST00000405600 NWD2Q9ULI1 1742 aa23.02■■□□□ 1.28
CGREF1-206ENST00000405600 ZBTB7CA1YPR0 619 aa23.01■■□□□ 1.27
CGREF1-206ENST00000405600 STRN4Q9NRL3 753 aa23.01■■□□□ 1.27
CGREF1-206ENST00000405600 COL14A1Q05707 1796 aaKnown RBP23■■□□□ 1.27
CGREF1-206ENST00000405600 BRD4O60885 1362 aaPredicted RBP23■■□□□ 1.27
CGREF1-206ENST00000405600 KIAA0232Q92628 1395 aa23■■□□□ 1.27
CGREF1-206ENST00000405600 KIF7Q2M1P5 1343 aa23■■□□□ 1.27
CGREF1-206ENST00000405600 FAM98CQ17RN3 349 aaKnown RBP23■■□□□ 1.27
CGREF1-206ENST00000405600 MIER1Q8N108 512 aa22.99■■□□□ 1.27
CGREF1-206ENST00000405600 NLRP13Q86W25 1043 aa22.98■■□□□ 1.27
CGREF1-206ENST00000405600 PUS7Q96PZ0 661 aaKnown RBP22.98■■□□□ 1.27
CGREF1-206ENST00000405600 CRYBG1Q9Y4K1 1723 aa22.97■■□□□ 1.27
CGREF1-206ENST00000405600 EVA1CP58658 441 aa22.96■■□□□ 1.27
CGREF1-206ENST00000405600 TMF1P82094 1093 aa22.96■■□□□ 1.27
CGREF1-206ENST00000405600 PHRF1Q9P1Y6 1649 aaKnown RBP22.95■■□□□ 1.26
CGREF1-206ENST00000405600 BRWD3Q6RI45 1802 aa22.95■■□□□ 1.26
CGREF1-206ENST00000405600 C11orf95C9JLR9 678 aaPredicted RBP22.95■■□□□ 1.26
CGREF1-206ENST00000405600 ANP32CO43423 234 aa22.95■■□□□ 1.26
CGREF1-206ENST00000405600 NLRP6P59044 892 aa22.95■■□□□ 1.26
CGREF1-206ENST00000405600 CDCA8Q53HL2 280 aa22.95■■□□□ 1.26
CGREF1-206ENST00000405600 TESK2Q96S53 571 aa22.95■■□□□ 1.26
CGREF1-206ENST00000405600 USP35Q9P2H5 1018 aa22.95■■□□□ 1.26
CGREF1-206ENST00000405600 NRAPQ86VF7 1730 aa22.94■■□□□ 1.26
CGREF1-206ENST00000405600 KRT27Q7Z3Y8 459 aa22.94■■□□□ 1.26
CGREF1-206ENST00000405600 ZNF692Q9BU19 519 aaPredicted RBP22.94■■□□□ 1.26
CGREF1-206ENST00000405600 ONECUT3O60422 494 aaPredicted RBP22.91■■□□□ 1.26
CGREF1-206ENST00000405600 GCP02774 474 aa22.91■■□□□ 1.26
CGREF1-206ENST00000405600 TMC1Q8TDI8 760 aa22.91■■□□□ 1.26
CGREF1-206ENST00000405600 USP6P35125 1406 aa22.91■■□□□ 1.26
CGREF1-206ENST00000405600 SPATA31A5Q5VU36 1347 aa22.91■■□□□ 1.26
CGREF1-206ENST00000405600 SPATA31A7Q8IWB4 1347 aa22.91■■□□□ 1.26
CGREF1-206ENST00000405600 NINLQ9Y2I6 1382 aa22.9■■□□□ 1.26
CGREF1-206ENST00000405600 SF3B2Q13435 895 aaKnown RBP22.9■■□□□ 1.26
CGREF1-206ENST00000405600 SOX12O15370 315 aa22.89■■□□□ 1.26
CGREF1-206ENST00000405600 CCDC125Q86Z20 511 aa22.89■■□□□ 1.26
CGREF1-206ENST00000405600 POLR3GLQ9BT43 218 aa22.89■■□□□ 1.26
CGREF1-206ENST00000405600 FAM182BQ5T319 152 aa22.88■■□□□ 1.25
CGREF1-206ENST00000405600 USP19O94966 1318 aa22.87■■□□□ 1.25
CGREF1-206ENST00000405600 HDGFL2Q7Z4V5 671 aaPredicted RBP22.86■■□□□ 1.25
CGREF1-206ENST00000405600 NRKQ7Z2Y5 1582 aa22.86■■□□□ 1.25
CGREF1-206ENST00000405600 CPSF1Q10570 1443 aaKnown RBP22.86■■□□□ 1.25
CGREF1-206ENST00000405600 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.85■■□□□ 1.25
CGREF1-206ENST00000405600 TERF2IPQ9NYB0 399 aa22.85■■□□□ 1.25
CGREF1-206ENST00000405600 SPATA31A1Q5TZJ5 1347 aa22.85■■□□□ 1.25
CGREF1-206ENST00000405600 TTC21BQ7Z4L5 1316 aa22.85■■□□□ 1.25
CGREF1-206ENST00000405600 KTN1Q86UP2 1357 aaKnown RBP22.85■■□□□ 1.25
CGREF1-206ENST00000405600 LARP1Q6PKG0 1096 aaKnown RBP22.84■■□□□ 1.25
CGREF1-206ENST00000405600 TTC21AQ8NDW8 1320 aa22.84■■□□□ 1.25
CGREF1-206ENST00000405600 DEFB132Q7Z7B7 95 aa22.83■■□□□ 1.25
CGREF1-206ENST00000405600 EP400Q96L91 3159 aa22.83■■□□□ 1.25
CGREF1-206ENST00000405600 SSH2Q76I76 1423 aa22.83■■□□□ 1.25
CGREF1-206ENST00000405600 BLMP54132 1417 aaPredicted RBP22.82■■□□□ 1.24
CGREF1-206ENST00000405600 CAMTA1Q9Y6Y1 1673 aa22.82■■□□□ 1.24
CGREF1-206ENST00000405600 CPDO75976 1380 aa22.82■■□□□ 1.24
CGREF1-206ENST00000405600 SLC12A5Q9H2X9 1139 aa22.81■■□□□ 1.24
CGREF1-206ENST00000405600 ZRANB1Q9UGI0 708 aa22.81■■□□□ 1.24
CGREF1-206ENST00000405600 AKAP12Q02952 1782 aa22.8■■□□□ 1.24
CGREF1-206ENST00000405600 PIK3C2AO00443 1686 aa22.8■■□□□ 1.24
CGREF1-206ENST00000405600 CCER2I3L3R5 266 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms