RNA–Protein interactions for RNA: ENST00000404548.5

HDAC11-205, Transcript of histone deacetylase 11, humanhuman

TSL 4 BASIC

Gene HDAC11, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-205ENST00000404548 CCDC9Q9Y3X0 531 aaKnown RBP28.31■■■□□ 2.12
HDAC11-205ENST00000404548 KIAA1210Q9ULL0 1709 aa28.31■■■□□ 2.12
HDAC11-205ENST00000404548 PLEKHG5O94827 1062 aa28.29■■■□□ 2.12
HDAC11-205ENST00000404548 KRT27Q7Z3Y8 459 aa28.29■■■□□ 2.12
HDAC11-205ENST00000404548 BTG4Q9NY30 223 aa28.29■■■□□ 2.12
HDAC11-205ENST00000404548 NUDT16Q96DE0 195 aaKnown RBP28.27■■■□□ 2.12
HDAC11-205ENST00000404548 SF3B2Q13435 895 aaKnown RBP28.25■■■□□ 2.11
HDAC11-205ENST00000404548 POLR3AO14802 1390 aaPredicted RBP28.24■■■□□ 2.11
HDAC11-205ENST00000404548 TOPAZ1Q8N9V7 1692 aa28.24■■■□□ 2.11
HDAC11-205ENST00000404548 PAK3O75914 559 aaPredicted RBP28.22■■■□□ 2.11
HDAC11-205ENST00000404548 SPATA31A5Q5VU36 1347 aa28.21■■■□□ 2.11
HDAC11-205ENST00000404548 SPATA31A7Q8IWB4 1347 aa28.21■■■□□ 2.11
HDAC11-205ENST00000404548 FAM98CQ17RN3 349 aaKnown RBP28.21■■■□□ 2.11
HDAC11-205ENST00000404548 CDK19Q9BWU1 502 aa28.21■■■□□ 2.11
HDAC11-205ENST00000404548 PRDM11Q9NQV5 511 aa28.2■■■□□ 2.1
HDAC11-205ENST00000404548 CCDC61Q9Y6R9 512 aa28.2■■■□□ 2.1
HDAC11-205ENST00000404548 DEFB132Q7Z7B7 95 aa28.19■■■□□ 2.1
HDAC11-205ENST00000404548 THSD7AQ9UPZ6 1657 aa28.19■■■□□ 2.1
HDAC11-205ENST00000404548 PHRF1Q9P1Y6 1649 aaKnown RBP28.18■■■□□ 2.1
HDAC11-205ENST00000404548 PLEKHG3A1L390 1219 aa28.18■■■□□ 2.1
HDAC11-205ENST00000404548 KIAA0232Q92628 1395 aa28.16■■■□□ 2.1
HDAC11-205ENST00000404548 A0A0G2JS52 829 aa28.16■■■□□ 2.1
HDAC11-205ENST00000404548 MYT1Q01538 1121 aa28.16■■■□□ 2.1
HDAC11-205ENST00000404548 ACEP12821 1306 aa28.15■■■□□ 2.1
HDAC11-205ENST00000404548 NBPF8Q3BBV2 869 aa28.14■■■□□ 2.1
HDAC11-205ENST00000404548 BAG6P46379 1132 aa28.12■■■□□ 2.09
HDAC11-205ENST00000404548 SPATA31A1Q5TZJ5 1347 aa28.12■■■□□ 2.09
HDAC11-205ENST00000404548 NBPF1Q3BBV0 1214 aa28.11■■■□□ 2.09
HDAC11-205ENST00000404548 BRD4O60885 1362 aaPredicted RBP28.11■■■□□ 2.09
HDAC11-205ENST00000404548 NRKQ7Z2Y5 1582 aa28.1■■■□□ 2.09
HDAC11-205ENST00000404548 DISP2A7MBM2 1401 aa28.09■■■□□ 2.09
HDAC11-205ENST00000404548 RGPD1P0DJD0 1748 aa28.09■■■□□ 2.09
HDAC11-205ENST00000404548 USP19O94966 1318 aa28.09■■■□□ 2.09
HDAC11-205ENST00000404548 CENPJQ9HC77 1338 aaPredicted RBP28.09■■■□□ 2.09
HDAC11-205ENST00000404548 CPDO75976 1380 aa28.09■■■□□ 2.09
HDAC11-205ENST00000404548 LRP5O75197 1615 aa28.05■■■□□ 2.08
HDAC11-205ENST00000404548 CHRNA2Q15822 529 aa28.05■■■□□ 2.08
HDAC11-205ENST00000404548 PPIP5K1Q6PFW1 1433 aa28.05■■■□□ 2.08
HDAC11-205ENST00000404548 SSH2Q76I76 1423 aa28.04■■■□□ 2.08
HDAC11-205ENST00000404548 ZC3H6P61129 1189 aaKnown RBP28.04■■■□□ 2.08
HDAC11-205ENST00000404548 ABTB2Q8N961 1025 aa28.04■■■□□ 2.08
HDAC11-205ENST00000404548 LMO7Q8WWI1 1683 aa28.03■■■□□ 2.08
HDAC11-205ENST00000404548 SRPK2P78362 688 aaKnown RBP28.03■■■□□ 2.08
HDAC11-205ENST00000404548 NUTM2GQ5VZR2 741 aa28.02■■■□□ 2.08
HDAC11-205ENST00000404548 BARGINQ6ZT62 677 aa28.02■■■□□ 2.08
HDAC11-205ENST00000404548 TNS1Q9HBL0 1735 aaKnown RBP28.01■■■□□ 2.07
HDAC11-205ENST00000404548 QRICH2Q9H0J4 1663 aa28.01■■■□□ 2.07
HDAC11-205ENST00000404548 STRN4Q9NRL3 753 aa28.01■■■□□ 2.07
HDAC11-205ENST00000404548 CAMTA1Q9Y6Y1 1673 aa28■■■□□ 2.07
HDAC11-205ENST00000404548 NLRP13Q86W25 1043 aa28■■■□□ 2.07
HDAC11-205ENST00000404548 FAM196AQ6ZSG2 479 aa27.99■■■□□ 2.07
HDAC11-205ENST00000404548 FAM182BQ5T319 152 aa27.98■■■□□ 2.07
HDAC11-205ENST00000404548 CABP2Q9NPB3 220 aa27.97■■■□□ 2.07
HDAC11-205ENST00000404548 USP6P35125 1406 aa27.97■■■□□ 2.07
HDAC11-205ENST00000404548 GCP02774 474 aa27.96■■■□□ 2.07
HDAC11-205ENST00000404548 EVA1CP58658 441 aa27.96■■■□□ 2.07
HDAC11-205ENST00000404548 EN1Q05925 392 aaPredicted RBP27.96■■■□□ 2.07
HDAC11-205ENST00000404548 L3MBTL2Q969R5 705 aa27.96■■■□□ 2.07
HDAC11-205ENST00000404548 THRAP3Q9Y2W1 955 aaKnown RBP27.95■■■□□ 2.06
HDAC11-205ENST00000404548 PARD3Q8TEW0 1356 aa27.95■■■□□ 2.06
HDAC11-205ENST00000404548 TRPM1Q7Z4N2 1603 aa27.93■■■□□ 2.06
HDAC11-205ENST00000404548 TCP11L2Q8N4U5 519 aa27.93■■■□□ 2.06
HDAC11-205ENST00000404548 COL5A2P05997 1499 aaPredicted RBP27.93■■■□□ 2.06
HDAC11-205ENST00000404548 SLIT3O75094 1523 aa27.92■■■□□ 2.06
HDAC11-205ENST00000404548 LARP1Q6PKG0 1096 aaKnown RBP27.92■■■□□ 2.06
HDAC11-205ENST00000404548 CABP1Q9NZU7 370 aa27.91■■■□□ 2.06
HDAC11-205ENST00000404548 EVC2Q86UK5 1308 aa27.91■■■□□ 2.06
HDAC11-205ENST00000404548 USP35Q9P2H5 1018 aa27.9■■■□□ 2.06
HDAC11-205ENST00000404548 AATKQ6ZMQ8 1374 aa27.89■■■□□ 2.06
HDAC11-205ENST00000404548 PSDA5PKW4 1024 aaPredicted RBP27.89■■■□□ 2.06
HDAC11-205ENST00000404548 PDE3BQ13370 1112 aa27.89■■■□□ 2.06
HDAC11-205ENST00000404548 CAMKK2Q96RR4 588 aa27.89■■■□□ 2.06
HDAC11-205ENST00000404548 TRIM37O94972 964 aa27.88■■■□□ 2.05
HDAC11-205ENST00000404548 PARP4Q9UKK3 1724 aaKnown RBP27.87■■■□□ 2.05
HDAC11-205ENST00000404548 CRB1P82279 1406 aa27.87■■■□□ 2.05
HDAC11-205ENST00000404548 C11orf95C9JLR9 678 aaPredicted RBP27.87■■■□□ 2.05
HDAC11-205ENST00000404548 EZH2Q15910 746 aaKnown RBP27.86■■■□□ 2.05
HDAC11-205ENST00000404548 ROCK2O75116 1388 aaKnown RBP27.86■■■□□ 2.05
HDAC11-205ENST00000404548 PIK3C2AO00443 1686 aa27.85■■■□□ 2.05
HDAC11-205ENST00000404548 NLRP6P59044 892 aa27.85■■■□□ 2.05
HDAC11-205ENST00000404548 ZNF692Q9BU19 519 aaPredicted RBP27.83■■■□□ 2.05
HDAC11-205ENST00000404548 APBA3O96018 575 aa27.82■■■□□ 2.04
HDAC11-205ENST00000404548 R3HDM1Q15032 1099 aaKnown RBP27.82■■■□□ 2.04
HDAC11-205ENST00000404548 RREB1Q92766 1687 aa27.81■■■□□ 2.04
HDAC11-205ENST00000404548 SIN3AQ96ST3 1273 aa27.81■■■□□ 2.04
HDAC11-205ENST00000404548 SBNO2Q9Y2G9 1366 aa27.8■■■□□ 2.04
HDAC11-205ENST00000404548 COL18A1P39060 1754 aa27.78■■■□□ 2.04
HDAC11-205ENST00000404548 CPSF1Q10570 1443 aaKnown RBP27.78■■■□□ 2.04
HDAC11-205ENST00000404548 TTC21AQ8NDW8 1320 aa27.78■■■□□ 2.04
HDAC11-205ENST00000404548 AKAP12Q02952 1782 aa27.78■■■□□ 2.04
HDAC11-205ENST00000404548 OVOS2A0A0G2JMS6 1433 aa27.77■■■□□ 2.04
HDAC11-205ENST00000404548 OVOS2A0A0J9YW53 1432 aa27.77■■■□□ 2.04
HDAC11-205ENST00000404548 OVOS2Q6IE36 1432 aa27.77■■■□□ 2.04
HDAC11-205ENST00000404548 TTC21BQ7Z4L5 1316 aa27.77■■■□□ 2.04
HDAC11-205ENST00000404548 KCNH5Q8NCM2 988 aa27.76■■■□□ 2.03
HDAC11-205ENST00000404548 PEAK1Q9H792 1746 aa27.75■■■□□ 2.03
HDAC11-205ENST00000404548 LRRC37A3O60309 1634 aa27.75■■■□□ 2.03
HDAC11-205ENST00000404548 WDR17Q8IZU2 1322 aa27.74■■■□□ 2.03
HDAC11-205ENST00000404548 ABCC6O95255 1503 aa27.74■■■□□ 2.03
HDAC11-205ENST00000404548 ARHGEF25Q86VW2 580 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms