RNA–Protein interactions for RNA: ENST00000402685.6

PDZRN4-202, Transcript of PDZ domain containing ring finger 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PDZRN4, Length 3,347 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-202ENST00000402685 SHANK2Q9UPX8 1470 aa25.71■■□□□ 1.71
PDZRN4-202ENST00000402685 KLHL40Q2TBA0 621 aa25.71■■□□□ 1.71
PDZRN4-202ENST00000402685 BCL11BQ9C0K0 894 aaPredicted RBP25.71■■□□□ 1.71
PDZRN4-202ENST00000402685 PPP1R9BQ96SB3 815 aa25.7■■□□□ 1.71
PDZRN4-202ENST00000402685 CIZ1Q9ULV3 898 aaPredicted RBP25.7■■□□□ 1.71
PDZRN4-202ENST00000402685 NGEFQ8N5V2 710 aa25.7■■□□□ 1.7
PDZRN4-202ENST00000402685 TMPOP42166 694 aaKnown RBP25.7■■□□□ 1.7
PDZRN4-202ENST00000402685 STK26Q9P289 416 aa25.7■■□□□ 1.7
PDZRN4-202ENST00000402685 C17orf53Q8N3J3 647 aaPredicted RBP25.69■■□□□ 1.7
PDZRN4-202ENST00000402685 RSPH4AQ5TD94 716 aa25.69■■□□□ 1.7
PDZRN4-202ENST00000402685 ARHGAP5Q13017 1502 aa25.69■■□□□ 1.7
PDZRN4-202ENST00000402685 POLR3AO14802 1390 aaPredicted RBP25.68■■□□□ 1.7
PDZRN4-202ENST00000402685 AAMPQ13685 434 aa25.68■■□□□ 1.7
PDZRN4-202ENST00000402685 DTNBO60941 627 aa25.67■■□□□ 1.7
PDZRN4-202ENST00000402685 VIRMAQ69YN4 1812 aaKnown RBP25.67■■□□□ 1.7
PDZRN4-202ENST00000402685 GDPD2Q9HCC8 539 aa25.66■■□□□ 1.7
PDZRN4-202ENST00000402685 OTUD7AQ8TE49 926 aaPredicted RBP25.66■■□□□ 1.7
PDZRN4-202ENST00000402685 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.66■■□□□ 1.7
PDZRN4-202ENST00000402685 PRDM4Q9UKN5 801 aa25.66■■□□□ 1.7
PDZRN4-202ENST00000402685 IGSF3O75054 1194 aa25.65■■□□□ 1.7
PDZRN4-202ENST00000402685 TRIM35Q9UPQ4 493 aa25.65■■□□□ 1.7
PDZRN4-202ENST00000402685 GPT2Q8TD30 523 aa25.63■■□□□ 1.69
PDZRN4-202ENST00000402685 LMBRD1Q9NUN5 540 aa25.63■■□□□ 1.69
PDZRN4-202ENST00000402685 CLASP1Q7Z460 1538 aa25.63■■□□□ 1.69
PDZRN4-202ENST00000402685 IPO8O15397 1037 aaKnown RBP25.63■■□□□ 1.69
PDZRN4-202ENST00000402685 BMP2KLQ5H9B9 411 aa25.63■■□□□ 1.69
PDZRN4-202ENST00000402685 SMARCA5O60264 1052 aaPredicted RBP25.63■■□□□ 1.69
PDZRN4-202ENST00000402685 HMOX1P09601 288 aa25.63■■□□□ 1.69
PDZRN4-202ENST00000402685 CBX1P83916 185 aa25.62■■□□□ 1.69
PDZRN4-202ENST00000402685 PHF23Q9BUL5 403 aaPredicted RBP25.62■■□□□ 1.69
PDZRN4-202ENST00000402685 NUP160Q12769 1436 aa25.62■■□□□ 1.69
PDZRN4-202ENST00000402685 KIF16BQ96L93 1317 aa25.62■■□□□ 1.69
PDZRN4-202ENST00000402685 TSPYL6Q8N831 410 aa25.62■■□□□ 1.69
PDZRN4-202ENST00000402685 TMEM63CQ9P1W3 806 aa25.61■■□□□ 1.69
PDZRN4-202ENST00000402685 NOL7Q9UMY1 257 aaKnown RBP25.6■■□□□ 1.69
PDZRN4-202ENST00000402685 ERVK-7P63135 1459 aa25.6■■□□□ 1.69
PDZRN4-202ENST00000402685 NPC1L1Q9UHC9 1359 aa25.59■■□□□ 1.69
PDZRN4-202ENST00000402685 SPAG9O60271 1321 aaKnown RBP25.59■■□□□ 1.69
PDZRN4-202ENST00000402685 MYO5CQ9NQX4 1742 aa25.58■■□□□ 1.69
PDZRN4-202ENST00000402685 SAMD9LQ8IVG5 1584 aa25.58■■□□□ 1.69
PDZRN4-202ENST00000402685 SRPK2P78362 688 aaKnown RBP25.58■■□□□ 1.69
PDZRN4-202ENST00000402685 GSPT1P15170 499 aaKnown RBP25.58■■□□□ 1.68
PDZRN4-202ENST00000402685 SYNJ2O15056 1496 aa25.58■■□□□ 1.68
PDZRN4-202ENST00000402685 IFT140Q96RY7 1462 aa25.58■■□□□ 1.68
PDZRN4-202ENST00000402685 NCOA3Q9Y6Q9 1424 aa25.57■■□□□ 1.68
PDZRN4-202ENST00000402685 CDC45O75419 566 aa25.57■■□□□ 1.68
PDZRN4-202ENST00000402685 SIRT2Q8IXJ6 389 aa25.57■■□□□ 1.68
PDZRN4-202ENST00000402685 ZKSCAN5Q9Y2L8 839 aa25.57■■□□□ 1.68
PDZRN4-202ENST00000402685 EIF2AK4Q9P2K8 1649 aaKnown RBP25.56■■□□□ 1.68
PDZRN4-202ENST00000402685 SYNMO15061 1565 aa25.56■■□□□ 1.68
PDZRN4-202ENST00000402685 TSHZ3Q63HK5 1081 aa25.56■■□□□ 1.68
PDZRN4-202ENST00000402685 SPDYE4A6NLX3 237 aa25.54■■□□□ 1.68
PDZRN4-202ENST00000402685 PTMSP20962 102 aa25.53■■□□□ 1.68
PDZRN4-202ENST00000402685 NUCB2P80303 420 aa25.52■■□□□ 1.68
PDZRN4-202ENST00000402685 CCDC27Q2M243 656 aa25.52■■□□□ 1.68
PDZRN4-202ENST00000402685 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.52■■□□□ 1.68
PDZRN4-202ENST00000402685 TTC12Q9H892 705 aaPredicted RBP25.52■■□□□ 1.68
PDZRN4-202ENST00000402685 ZBTB7BO15156 539 aaPredicted RBP25.52■■□□□ 1.68
PDZRN4-202ENST00000402685 ZNF445P59923 1031 aa25.51■■□□□ 1.67
PDZRN4-202ENST00000402685 EFCAB2Q5VUJ9 269 aa25.51■■□□□ 1.67
PDZRN4-202ENST00000402685 UGGT1Q9NYU2 1555 aa25.5■■□□□ 1.67
PDZRN4-202ENST00000402685 ZDHHC9Q9Y397 364 aa25.5■■□□□ 1.67
PDZRN4-202ENST00000402685 PRKAR2BP31323 418 aa25.49■■□□□ 1.67
PDZRN4-202ENST00000402685 PPIP5K1Q6PFW1 1433 aa25.49■■□□□ 1.67
PDZRN4-202ENST00000402685 LARP6Q9BRS8 491 aaKnown RBP25.49■■□□□ 1.67
PDZRN4-202ENST00000402685 NEK4P51957 841 aa25.48■■□□□ 1.67
PDZRN4-202ENST00000402685 DCTN1Q14203 1278 aa25.48■■□□□ 1.67
PDZRN4-202ENST00000402685 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.48■■□□□ 1.67
PDZRN4-202ENST00000402685 RABEP1Q15276 862 aa25.47■■□□□ 1.67
PDZRN4-202ENST00000402685 GGT6Q6P531 493 aa25.47■■□□□ 1.67
PDZRN4-202ENST00000402685 USP25Q9UHP3 1055 aa25.47■■□□□ 1.67
PDZRN4-202ENST00000402685 PTPRTO14522 1441 aa25.47■■□□□ 1.67
PDZRN4-202ENST00000402685 PLEKHM2Q8IWE5 1019 aa25.46■■□□□ 1.67
PDZRN4-202ENST00000402685 ZMYM3Q14202 1370 aa25.46■■□□□ 1.67
PDZRN4-202ENST00000402685 ZNF500O60304 480 aaPredicted RBP25.46■■□□□ 1.67
PDZRN4-202ENST00000402685 SASS6Q6UVJ0 657 aa25.46■■□□□ 1.67
PDZRN4-202ENST00000402685 CD109Q6YHK3 1445 aa25.46■■□□□ 1.67
PDZRN4-202ENST00000402685 TRAPPC8Q9Y2L5 1435 aa25.46■■□□□ 1.67
PDZRN4-202ENST00000402685 GCC1Q96CN9 775 aa25.45■■□□□ 1.66
PDZRN4-202ENST00000402685 PHACTR3Q96KR7 559 aa25.45■■□□□ 1.66
PDZRN4-202ENST00000402685 CCDC39Q9UFE4 941 aa25.45■■□□□ 1.66
PDZRN4-202ENST00000402685 ST18O60284 1047 aa25.44■■□□□ 1.66
PDZRN4-202ENST00000402685 LRSAM1Q6UWE0 723 aa25.44■■□□□ 1.66
PDZRN4-202ENST00000402685 PLEKHF1Q96S99 279 aa25.44■■□□□ 1.66
PDZRN4-202ENST00000402685 MINK1Q8N4C8 1332 aaPredicted RBP25.44■■□□□ 1.66
PDZRN4-202ENST00000402685 FAM83GA6ND36 823 aa25.44■■□□□ 1.66
PDZRN4-202ENST00000402685 USP26Q9BXU7 913 aa25.44■■□□□ 1.66
PDZRN4-202ENST00000402685 KRT24Q2M2I5 525 aa25.43■■□□□ 1.66
PDZRN4-202ENST00000402685 DIAPH1O60610 1272 aaKnown RBP25.43■■□□□ 1.66
PDZRN4-202ENST00000402685 GADD45BO75293 160 aaPredicted RBP25.43■■□□□ 1.66
PDZRN4-202ENST00000402685 SDSP20132 328 aa25.42■■□□□ 1.66
PDZRN4-202ENST00000402685 MADDQ8WXG6 1647 aa25.42■■□□□ 1.66
PDZRN4-202ENST00000402685 PDLIM2Q96JY6 352 aa25.42■■□□□ 1.66
PDZRN4-202ENST00000402685 MAP7D2Q96T17 732 aa25.42■■□□□ 1.66
PDZRN4-202ENST00000402685 UPF3BQ9BZI7 483 aaKnown RBP25.42■■□□□ 1.66
PDZRN4-202ENST00000402685 DYNC1I1O14576 645 aa25.42■■□□□ 1.66
PDZRN4-202ENST00000402685 KIAA2012Q0VF49 1180 aa25.42■■□□□ 1.66
PDZRN4-202ENST00000402685 ABCA8O94911 1581 aa25.42■■□□□ 1.66
PDZRN4-202ENST00000402685 CSPP1Q1MSJ5 1256 aa25.41■■□□□ 1.66
PDZRN4-202ENST00000402685 ATP10AO60312 1499 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms