RNA–Protein interactions for RNA: ENST00000402096.5

ATG4B-204, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 1,685 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-204ENST00000402096 MSH6P52701 1360 aa27.6■■■□□ 2.01
ATG4B-204ENST00000402096 NME9Q86XW9 330 aa27.59■■■□□ 2.01
ATG4B-204ENST00000402096 DCCP43146 1447 aa27.59■■■□□ 2.01
ATG4B-204ENST00000402096 TTC21BQ7Z4L5 1316 aa27.58■■■□□ 2.01
ATG4B-204ENST00000402096 PNISRQ8TF01 805 aaKnown RBP27.57■■■□□ 2
ATG4B-204ENST00000402096 C1orf167Q5SNV9 1468 aa27.54■■■□□ 2
ATG4B-204ENST00000402096 CADPS2Q86UW7 1296 aa27.54■■■□□ 2
ATG4B-204ENST00000402096 KIF1AQ12756 1690 aa27.54■■■□□ 2
ATG4B-204ENST00000402096 COG3Q96JB2 828 aa27.53■■■□□ 2
ATG4B-204ENST00000402096 ORAI2Q96SN7 254 aa27.53■■■□□ 2
ATG4B-204ENST00000402096 MST1RQ04912 1400 aa27.53■■■□□ 2
ATG4B-204ENST00000402096 CENPBP07199 599 aaPredicted RBP27.52■■■□□ 2
ATG4B-204ENST00000402096 ZRANB1Q9UGI0 708 aa27.52■■■□□ 2
ATG4B-204ENST00000402096 SSH2Q76I76 1423 aa27.52■■■□□ 2
ATG4B-204ENST00000402096 TTC21AQ8NDW8 1320 aa27.52■■■□□ 2
ATG4B-204ENST00000402096 MAP2P11137 1827 aaKnown RBP27.49■■□□□ 1.99
ATG4B-204ENST00000402096 MTHFSP49914 203 aa27.49■■□□□ 1.99
ATG4B-204ENST00000402096 HNRNPUQ00839 825 aaKnown RBP eCLIP27.49■■□□□ 1.99
ATG4B-204ENST00000402096 PSME1Q06323 249 aa27.49■■□□□ 1.99
ATG4B-204ENST00000402096 PAK3O75914 559 aaPredicted RBP27.48■■□□□ 1.99
ATG4B-204ENST00000402096 AEBP2Q6ZN18 517 aaPredicted RBP27.48■■□□□ 1.99
ATG4B-204ENST00000402096 PIK3C2AO00443 1686 aa27.48■■□□□ 1.99
ATG4B-204ENST00000402096 WDR43Q15061 677 aaKnown RBP eCLIP27.46■■□□□ 1.99
ATG4B-204ENST00000402096 CFAP53Q96M91 514 aa27.46■■□□□ 1.99
ATG4B-204ENST00000402096 FOXO3O43524 673 aa27.45■■□□□ 1.98
ATG4B-204ENST00000402096 OVOS2A0A0J9YW53 1432 aa27.44■■□□□ 1.98
ATG4B-204ENST00000402096 OVOS2Q6IE36 1432 aa27.44■■□□□ 1.98
ATG4B-204ENST00000402096 SCAF1Q9H7N4 1312 aaKnown RBP27.44■■□□□ 1.98
ATG4B-204ENST00000402096 FBLN1P23142 703 aa27.41■■□□□ 1.98
ATG4B-204ENST00000402096 XPCQ01831 940 aaPredicted RBP27.41■■□□□ 1.98
ATG4B-204ENST00000402096 SHPRHQ149N8 1683 aa27.41■■□□□ 1.98
ATG4B-204ENST00000402096 ABTB2Q8N961 1025 aa27.4■■□□□ 1.98
ATG4B-204ENST00000402096 NLRP6P59044 892 aa27.39■■□□□ 1.97
ATG4B-204ENST00000402096 NUTM2GQ5VZR2 741 aa27.39■■□□□ 1.97
ATG4B-204ENST00000402096 PPM1GO15355 546 aaPredicted RBP27.38■■□□□ 1.97
ATG4B-204ENST00000402096 USP31Q70CQ4 1352 aa27.38■■□□□ 1.97
ATG4B-204ENST00000402096 USP54Q70EL1 1684 aa27.38■■□□□ 1.97
ATG4B-204ENST00000402096 TRPM3Q9HCF6 1732 aaPredicted RBP27.38■■□□□ 1.97
ATG4B-204ENST00000402096 MARF1Q9Y4F3 1742 aaKnown RBP27.38■■□□□ 1.97
ATG4B-204ENST00000402096 AATKQ6ZMQ8 1374 aa27.37■■□□□ 1.97
ATG4B-204ENST00000402096 LTBP4Q8N2S1 1624 aa27.37■■□□□ 1.97
ATG4B-204ENST00000402096 KRT28Q7Z3Y7 464 aa27.36■■□□□ 1.97
ATG4B-204ENST00000402096 POLKQ9UBT6 870 aa27.36■■□□□ 1.97
ATG4B-204ENST00000402096 ADAMTS8Q9UP79 889 aa27.36■■□□□ 1.97
ATG4B-204ENST00000402096 SOX12O15370 315 aa27.36■■□□□ 1.97
ATG4B-204ENST00000402096 SLAIN2Q9P270 581 aa27.35■■□□□ 1.97
ATG4B-204ENST00000402096 RRS1Q15050 365 aaKnown RBP27.34■■□□□ 1.97
ATG4B-204ENST00000402096 EMILIN1Q9Y6C2 1016 aa27.34■■□□□ 1.97
ATG4B-204ENST00000402096 LMOD2Q6P5Q4 547 aa27.32■■□□□ 1.96
ATG4B-204ENST00000402096 DDX17Q92841 729 aaKnown RBP27.32■■□□□ 1.96
ATG4B-204ENST00000402096 BLMP54132 1417 aaPredicted RBP27.32■■□□□ 1.96
ATG4B-204ENST00000402096 NPHP3Q7Z494 1330 aa27.31■■□□□ 1.96
ATG4B-204ENST00000402096 COL3A1P02461 1466 aaPredicted RBP27.31■■□□□ 1.96
ATG4B-204ENST00000402096 SENP3-EIF4A1A0A087X0R7 540 aa27.31■■□□□ 1.96
ATG4B-204ENST00000402096 SMG6Q86US8 1419 aaKnown RBP27.31■■□□□ 1.96
ATG4B-204ENST00000402096 INSRP06213 1382 aa27.31■■□□□ 1.96
ATG4B-204ENST00000402096 BRINP3Q76B58 766 aa27.3■■□□□ 1.96
ATG4B-204ENST00000402096 CDK12Q9NYV4 1490 aaPredicted RBP27.3■■□□□ 1.96
ATG4B-204ENST00000402096 NUDCQ9Y266 331 aa27.29■■□□□ 1.96
ATG4B-204ENST00000402096 PNPLA6Q8IY17 1366 aa27.28■■□□□ 1.96
ATG4B-204ENST00000402096 ALS2Q96Q42 1657 aa27.28■■□□□ 1.96
ATG4B-204ENST00000402096 DIAPH1O60610 1272 aaKnown RBP27.27■■□□□ 1.96
ATG4B-204ENST00000402096 ZBED9Q6R2W3 1325 aa27.26■■□□□ 1.95
ATG4B-204ENST00000402096 U2SURPO15042 1029 aaKnown RBP27.26■■□□□ 1.95
ATG4B-204ENST00000402096 PEAK1Q9H792 1746 aa27.25■■□□□ 1.95
ATG4B-204ENST00000402096 PLEKHG5O94827 1062 aa27.24■■□□□ 1.95
ATG4B-204ENST00000402096 U2AF1L5P0DN76 240 aaPredicted RBP27.24■■□□□ 1.95
ATG4B-204ENST00000402096 U2AF1Q01081 240 aaKnown RBP eCLIP27.24■■□□□ 1.95
ATG4B-204ENST00000402096 PXDNQ92626 1479 aa27.24■■□□□ 1.95
ATG4B-204ENST00000402096 CCDC146Q8IYE0 955 aa27.24■■□□□ 1.95
ATG4B-204ENST00000402096 LTN1O94822 1766 aa27.23■■□□□ 1.95
ATG4B-204ENST00000402096 SBNO1A3KN83 1393 aa27.22■■□□□ 1.95
ATG4B-204ENST00000402096 MAP3K19Q56UN5 1328 aa27.22■■□□□ 1.95
ATG4B-204ENST00000402096 SALL2Q9Y467 1007 aaPredicted RBP27.21■■□□□ 1.95
ATG4B-204ENST00000402096 TNS3Q68CZ2 1445 aa27.2■■□□□ 1.94
ATG4B-204ENST00000402096 NHSL1Q5SYE7 1610 aa27.19■■□□□ 1.94
ATG4B-204ENST00000402096 AMPHP49418 695 aa27.19■■□□□ 1.94
ATG4B-204ENST00000402096 KCNH5Q8NCM2 988 aa27.19■■□□□ 1.94
ATG4B-204ENST00000402096 SLIT3O75094 1523 aa27.17■■□□□ 1.94
ATG4B-204ENST00000402096 NFAT5O94916 1531 aa27.17■■□□□ 1.94
ATG4B-204ENST00000402096 ROBO1Q9Y6N7 1651 aa27.17■■□□□ 1.94
ATG4B-204ENST00000402096 FLT4P35916 1363 aa27.17■■□□□ 1.94
ATG4B-204ENST00000402096 IL13P35225 146 aa27.15■■□□□ 1.94
ATG4B-204ENST00000402096 SPATA31A3Q5VYP0 1347 aa27.15■■□□□ 1.94
ATG4B-204ENST00000402096 ZBTB7CA1YPR0 619 aa27.14■■□□□ 1.94
ATG4B-204ENST00000402096 HSP90AB2PQ58FF8 381 aa27.14■■□□□ 1.94
ATG4B-204ENST00000402096 RUNDC1Q96C34 613 aa27.14■■□□□ 1.94
ATG4B-204ENST00000402096 USP19O94966 1318 aa27.14■■□□□ 1.93
ATG4B-204ENST00000402096 PHRF1Q9P1Y6 1649 aaKnown RBP27.13■■□□□ 1.93
ATG4B-204ENST00000402096 ARHGEF10O15013 1369 aa27.13■■□□□ 1.93
ATG4B-204ENST00000402096 GCP02774 474 aa27.13■■□□□ 1.93
ATG4B-204ENST00000402096 MED1Q15648 1581 aaPredicted RBP27.13■■□□□ 1.93
ATG4B-204ENST00000402096 SOS2Q07890 1332 aaPredicted RBP27.12■■□□□ 1.93
ATG4B-204ENST00000402096 APAF1O14727 1248 aa27.12■■□□□ 1.93
ATG4B-204ENST00000402096 KIF24Q5T7B8 1368 aa27.12■■□□□ 1.93
ATG4B-204ENST00000402096 EIF4A2Q14240 407 aaKnown RBP27.11■■□□□ 1.93
ATG4B-204ENST00000402096 HOXC9P31274 260 aa27.1■■□□□ 1.93
ATG4B-204ENST00000402096 CRYBG1Q9Y4K1 1723 aa27.09■■□□□ 1.93
ATG4B-204ENST00000402096 RTL1A6NKG5 1358 aa27.09■■□□□ 1.93
ATG4B-204ENST00000402096 PNNQ9H307 717 aaKnown RBP27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms