RNA–Protein interactions for RNA: ENST00000401959.5

SNU13-203, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNU13, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-203ENST00000401959 PLEKHG3A1L390 1219 aa17.26■□□□□ 0.35
SNU13-203ENST00000401959 NRKQ7Z2Y5 1582 aa17.25■□□□□ 0.35
SNU13-203ENST00000401959 COL3A1P02461 1466 aaPredicted RBP17.25■□□□□ 0.35
SNU13-203ENST00000401959 MAP2P11137 1827 aaKnown RBP17.25■□□□□ 0.35
SNU13-203ENST00000401959 APAF1O14727 1248 aa17.25■□□□□ 0.35
SNU13-203ENST00000401959 RUNDC1Q96C34 613 aa17.25■□□□□ 0.35
SNU13-203ENST00000401959 CDCA7LQ96GN5 454 aa17.25■□□□□ 0.35
SNU13-203ENST00000401959 IRX6P78412 446 aaPredicted RBP17.24■□□□□ 0.35
SNU13-203ENST00000401959 KCNA6P17658 529 aa17.23■□□□□ 0.35
SNU13-203ENST00000401959 GOLGA2Q08379 1002 aa17.23■□□□□ 0.35
SNU13-203ENST00000401959 RCAN3Q9UKA8 241 aa17.23■□□□□ 0.35
SNU13-203ENST00000401959 FMN2Q9NZ56 1722 aa17.23■□□□□ 0.35
SNU13-203ENST00000401959 ANKARQ7Z5J8 1434 aa17.22■□□□□ 0.35
SNU13-203ENST00000401959 RGPD8O14715 1765 aaPredicted RBP17.22■□□□□ 0.35
SNU13-203ENST00000401959 NKTRP30414 1462 aaKnown RBP17.22■□□□□ 0.35
SNU13-203ENST00000401959 IQSEC2Q5JU85 1478 aa17.22■□□□□ 0.35
SNU13-203ENST00000401959 PNPLA6Q8IY17 1366 aa17.22■□□□□ 0.35
SNU13-203ENST00000401959 ACEP12821 1306 aa17.21■□□□□ 0.35
SNU13-203ENST00000401959 AATKQ6ZMQ8 1374 aa17.21■□□□□ 0.35
SNU13-203ENST00000401959 USP6P35125 1406 aa17.2■□□□□ 0.34
SNU13-203ENST00000401959 NME9Q86XW9 330 aa17.2■□□□□ 0.34
SNU13-203ENST00000401959 COG3Q96JB2 828 aa17.2■□□□□ 0.34
SNU13-203ENST00000401959 PPP4R2Q9NY27 417 aa17.2■□□□□ 0.34
SNU13-203ENST00000401959 U2AF1L5P0DN76 240 aaPredicted RBP17.2■□□□□ 0.34
SNU13-203ENST00000401959 U2AF1Q01081 240 aaKnown RBP eCLIP17.2■□□□□ 0.34
SNU13-203ENST00000401959 NCBP3Q53F19 620 aaKnown RBP17.2■□□□□ 0.34
SNU13-203ENST00000401959 NALCNQ8IZF0 1738 aa17.19■□□□□ 0.34
SNU13-203ENST00000401959 TSHZ2Q9NRE2 1034 aa17.19■□□□□ 0.34
SNU13-203ENST00000401959 TTC21BQ7Z4L5 1316 aa17.18■□□□□ 0.34
SNU13-203ENST00000401959 NUTM2FA1L443 756 aa17.18■□□□□ 0.34
SNU13-203ENST00000401959 DIAPH1O60610 1272 aaKnown RBP17.18■□□□□ 0.34
SNU13-203ENST00000401959 SLFN5Q08AF3 891 aa17.18■□□□□ 0.34
SNU13-203ENST00000401959 CDK12Q9NYV4 1490 aaPredicted RBP17.17■□□□□ 0.34
SNU13-203ENST00000401959 DUSP27Q5VZP5 1158 aa17.17■□□□□ 0.34
SNU13-203ENST00000401959 ANP32EQ9BTT0 268 aa17.17■□□□□ 0.34
SNU13-203ENST00000401959 POLKQ9UBT6 870 aa17.17■□□□□ 0.34
SNU13-203ENST00000401959 RRP1P56182 461 aaKnown RBP17.16■□□□□ 0.34
SNU13-203ENST00000401959 TCP11L2Q8N4U5 519 aa17.16■□□□□ 0.34
SNU13-203ENST00000401959 PNNQ9H307 717 aaKnown RBP17.16■□□□□ 0.34
SNU13-203ENST00000401959 DMRT2Q9Y5R5 561 aa17.16■□□□□ 0.34
SNU13-203ENST00000401959 STRCP1A6NGW2 1772 aa17.16■□□□□ 0.34
SNU13-203ENST00000401959 E9PSI1 815 aa17.16■□□□□ 0.34
SNU13-203ENST00000401959 U2SURPO15042 1029 aaKnown RBP17.16■□□□□ 0.34
SNU13-203ENST00000401959 TRMT2AQ8IZ69 625 aaKnown RBP17.16■□□□□ 0.34
SNU13-203ENST00000401959 NWD1Q149M9 1564 aa17.16■□□□□ 0.34
SNU13-203ENST00000401959 TTC21AQ8NDW8 1320 aa17.15■□□□□ 0.34
SNU13-203ENST00000401959 CCDC27Q2M243 656 aa17.15■□□□□ 0.34
SNU13-203ENST00000401959 SSH2Q76I76 1423 aa17.15■□□□□ 0.34
SNU13-203ENST00000401959 OVOS2A0A0J9YW53 1432 aa17.14■□□□□ 0.33
SNU13-203ENST00000401959 OVOS2Q6IE36 1432 aa17.14■□□□□ 0.33
SNU13-203ENST00000401959 WWC1Q8IX03 1113 aa17.14■□□□□ 0.33
SNU13-203ENST00000401959 ZRANB1Q9UGI0 708 aa17.14■□□□□ 0.33
SNU13-203ENST00000401959 ZNF335Q9H4Z2 1342 aaPredicted RBP17.14■□□□□ 0.33
SNU13-203ENST00000401959 ADGRL3Q9HAR2 1447 aa17.13■□□□□ 0.33
SNU13-203ENST00000401959 NGDNQ8NEJ9 315 aaKnown RBP17.13■□□□□ 0.33
SNU13-203ENST00000401959 PHF23Q9BUL5 403 aaPredicted RBP17.13■□□□□ 0.33
SNU13-203ENST00000401959 PPM1GO15355 546 aaPredicted RBP17.12■□□□□ 0.33
SNU13-203ENST00000401959 WDR63Q8IWG1 891 aa17.11■□□□□ 0.33
SNU13-203ENST00000401959 PMFBP1Q8TBY8 1022 aa17.11■□□□□ 0.33
SNU13-203ENST00000401959 PLEKHF1Q96S99 279 aa17.11■□□□□ 0.33
SNU13-203ENST00000401959 MAPK8IP3Q9UPT6 1336 aa17.11■□□□□ 0.33
SNU13-203ENST00000401959 EMILIN1Q9Y6C2 1016 aa17.1■□□□□ 0.33
SNU13-203ENST00000401959 FCHSD2O94868 740 aa17.1■□□□□ 0.33
SNU13-203ENST00000401959 FBLN1P23142 703 aa17.1■□□□□ 0.33
SNU13-203ENST00000401959 NEUROD2Q15784 382 aa17.1■□□□□ 0.33
SNU13-203ENST00000401959 RBM33Q96EV2 1170 aaKnown RBP17.1■□□□□ 0.33
SNU13-203ENST00000401959 RRP7AQ9Y3A4 280 aaKnown RBP17.1■□□□□ 0.33
SNU13-203ENST00000401959 USP31Q70CQ4 1352 aa17.1■□□□□ 0.33
SNU13-203ENST00000401959 USP54Q70EL1 1684 aa17.09■□□□□ 0.33
SNU13-203ENST00000401959 LRRC7Q96NW7 1537 aa17.09■□□□□ 0.33
SNU13-203ENST00000401959 PIK3C2AO00443 1686 aa17.08■□□□□ 0.32
SNU13-203ENST00000401959 SPINK5Q9NQ38 1064 aaPredicted RBP17.08■□□□□ 0.32
SNU13-203ENST00000401959 NEFMP07197 916 aa17.07■□□□□ 0.32
SNU13-203ENST00000401959 IL13P35225 146 aa17.07■□□□□ 0.32
SNU13-203ENST00000401959 TMPOP42166 694 aaKnown RBP17.07■□□□□ 0.32
SNU13-203ENST00000401959 RRS1Q15050 365 aaKnown RBP17.06■□□□□ 0.32
SNU13-203ENST00000401959 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.05■□□□□ 0.32
SNU13-203ENST00000401959 RSPH6AQ9H0K4 717 aa17.05■□□□□ 0.32
SNU13-203ENST00000401959 PROSER2Q86WR7 435 aaPredicted RBP17.04■□□□□ 0.32
SNU13-203ENST00000401959 PHF8Q9UPP1 1060 aa17.04■□□□□ 0.32
SNU13-203ENST00000401959 PEAK1Q9H792 1746 aa17.04■□□□□ 0.32
SNU13-203ENST00000401959 MYH16Q9H6N6 1097 aa17.04■□□□□ 0.32
SNU13-203ENST00000401959 XIRP1Q702N8 1843 aaKnown RBP17.03■□□□□ 0.32
SNU13-203ENST00000401959 C14orf37Q86TY3 774 aa17.03■□□□□ 0.32
SNU13-203ENST00000401959 MARF1Q9Y4F3 1742 aaKnown RBP17.02■□□□□ 0.32
SNU13-203ENST00000401959 LTBP4Q8N2S1 1624 aa17.02■□□□□ 0.32
SNU13-203ENST00000401959 PRKAR2BP31323 418 aa17.02■□□□□ 0.32
SNU13-203ENST00000401959 B4GALNT3Q6L9W6 998 aa17.02■□□□□ 0.32
SNU13-203ENST00000401959 TMEM94Q12767 1356 aa17.01■□□□□ 0.31
SNU13-203ENST00000401959 IL16Q14005 1332 aa17.01■□□□□ 0.31
SNU13-203ENST00000401959 RIPK4P57078 832 aa17.01■□□□□ 0.31
SNU13-203ENST00000401959 CCDC136Q96JN2 1154 aa17.01■□□□□ 0.31
SNU13-203ENST00000401959 TRIM35Q9UPQ4 493 aa17■□□□□ 0.31
SNU13-203ENST00000401959 RGPD1P0DJD0 1748 aa16.99■□□□□ 0.31
SNU13-203ENST00000401959 PLIN1O60240 522 aa16.99■□□□□ 0.31
SNU13-203ENST00000401959 HMOX1P09601 288 aa16.99■□□□□ 0.31
SNU13-203ENST00000401959 NLRP6P59044 892 aa16.99■□□□□ 0.31
SNU13-203ENST00000401959 EXOC6Q8TAG9 804 aa16.99■□□□□ 0.31
SNU13-203ENST00000401959 SBNO1A3KN83 1393 aa16.99■□□□□ 0.31
SNU13-203ENST00000401959 KIF1AQ12756 1690 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms