RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 ZRANB1Q9UGI0 708 aa34.1■■■■□ 3.05
CPNE1-205ENST00000401607 SSH2Q76I76 1423 aa34.1■■■■□ 3.05
CPNE1-205ENST00000401607 NUDCQ9Y266 331 aa34.09■■■■□ 3.05
CPNE1-205ENST00000401607 TTC21BQ7Z4L5 1316 aa34.09■■■■□ 3.05
CPNE1-205ENST00000401607 HSPA2P54652 639 aa34.08■■■■□ 3.05
CPNE1-205ENST00000401607 PMFBP1Q8TBY8 1022 aa34.08■■■■□ 3.05
CPNE1-205ENST00000401607 CCDC146Q8IYE0 955 aa34.07■■■■□ 3.04
CPNE1-205ENST00000401607 LMTK3Q96Q04 1460 aa34.07■■■■□ 3.04
CPNE1-205ENST00000401607 SUPT16HQ9Y5B9 1047 aaKnown RBP34.05■■■■□ 3.04
CPNE1-205ENST00000401607 PNPLA6Q8IY17 1366 aa34.04■■■■□ 3.04
CPNE1-205ENST00000401607 PDE3BQ13370 1112 aa34.03■■■■□ 3.04
CPNE1-205ENST00000401607 COG3Q96JB2 828 aa34.03■■■■□ 3.04
CPNE1-205ENST00000401607 AATKQ6ZMQ8 1374 aa34.02■■■■□ 3.04
CPNE1-205ENST00000401607 FBLN1P23142 703 aa34.01■■■■□ 3.04
CPNE1-205ENST00000401607 POLKQ9UBT6 870 aa34.01■■■■□ 3.04
CPNE1-205ENST00000401607 OVOS2A0A0J9YW53 1432 aa34.01■■■■□ 3.03
CPNE1-205ENST00000401607 OVOS2Q6IE36 1432 aa34.01■■■■□ 3.03
CPNE1-205ENST00000401607 NGDNQ8NEJ9 315 aaKnown RBP34■■■■□ 3.03
CPNE1-205ENST00000401607 MAP2P11137 1827 aaKnown RBP34■■■■□ 3.03
CPNE1-205ENST00000401607 STRCP1A6NGW2 1772 aa33.97■■■■□ 3.03
CPNE1-205ENST00000401607 APAF1O14727 1248 aa33.97■■■■□ 3.03
CPNE1-205ENST00000401607 TTC21AQ8NDW8 1320 aa33.97■■■■□ 3.03
CPNE1-205ENST00000401607 ZNF521Q96K83 1311 aa33.97■■■■□ 3.03
CPNE1-205ENST00000401607 PROSER2Q86WR7 435 aaPredicted RBP33.95■■■■□ 3.02
CPNE1-205ENST00000401607 FKBP8Q14318 412 aa33.94■■■■□ 3.02
CPNE1-205ENST00000401607 CDCA7LQ96GN5 454 aa33.94■■■■□ 3.02
CPNE1-205ENST00000401607 NEFLP07196 543 aa33.93■■■■□ 3.02
CPNE1-205ENST00000401607 IQSEC2Q5JU85 1478 aa33.93■■■■□ 3.02
CPNE1-205ENST00000401607 STRCQ7RTU9 1775 aa33.93■■■■□ 3.02
CPNE1-205ENST00000401607 C14orf37Q86TY3 774 aa33.93■■■■□ 3.02
CPNE1-205ENST00000401607 EMILIN1Q9Y6C2 1016 aa33.93■■■■□ 3.02
CPNE1-205ENST00000401607 CDK12Q9NYV4 1490 aaPredicted RBP33.92■■■■□ 3.02
CPNE1-205ENST00000401607 RUNDC1Q96C34 613 aa33.92■■■■□ 3.02
CPNE1-205ENST00000401607 U2AF1L5P0DN76 240 aaPredicted RBP33.91■■■■□ 3.02
CPNE1-205ENST00000401607 U2AF1Q01081 240 aaKnown RBP eCLIP33.91■■■■□ 3.026e-11■■□□□ 12.7
CPNE1-205ENST00000401607 PIK3C2AO00443 1686 aa33.91■■■■□ 3.02
CPNE1-205ENST00000401607 DIAPH1O60610 1272 aaKnown RBP33.9■■■■□ 3.02
CPNE1-205ENST00000401607 PHF8Q9UPP1 1060 aa33.9■■■■□ 3.02
CPNE1-205ENST00000401607 USP31Q70CQ4 1352 aa33.9■■■■□ 3.02
CPNE1-205ENST00000401607 PPM1GO15355 546 aaPredicted RBP33.88■■■■□ 3.01
CPNE1-205ENST00000401607 NGEFQ8N5V2 710 aa33.88■■■■□ 3.01
CPNE1-205ENST00000401607 U2SURPO15042 1029 aaKnown RBP33.86■■■■□ 3.01
CPNE1-205ENST00000401607 RRS1Q15050 365 aaKnown RBP33.86■■■■□ 3.01
CPNE1-205ENST00000401607 TMEM94Q12767 1356 aa33.83■■■■□ 3.01
CPNE1-205ENST00000401607 USP54Q70EL1 1684 aa33.83■■■■□ 3.01
CPNE1-205ENST00000401607 ESCO1Q5FWF5 840 aa33.82■■■■□ 3
CPNE1-205ENST00000401607 TCP11L2Q8N4U5 519 aa33.82■■■■□ 3
CPNE1-205ENST00000401607 C19orf44Q9H6X5 657 aa33.82■■■■□ 3
CPNE1-205ENST00000401607 MARF1Q9Y4F3 1742 aaKnown RBP33.81■■■■□ 3
CPNE1-205ENST00000401607 NCOA3Q9Y6Q9 1424 aa33.81■■■■□ 3
CPNE1-205ENST00000401607 GOLGA2Q08379 1002 aa33.8■■■■□ 3
CPNE1-205ENST00000401607 PLEKHF1Q96S99 279 aa33.8■■■■□ 3
CPNE1-205ENST00000401607 RNF123Q5XPI4 1314 aa33.79■■■■□ 3
CPNE1-205ENST00000401607 PEAK1Q9H792 1746 aa33.78■■■■□ 3
CPNE1-205ENST00000401607 IL13P35225 146 aa33.77■■■■□ 3
CPNE1-205ENST00000401607 LRRC7Q96NW7 1537 aa33.76■■■■□ 3
CPNE1-205ENST00000401607 ORAI2Q96SN7 254 aa33.76■■■■□ 3
CPNE1-205ENST00000401607 C1orf167Q5SNV9 1468 aa33.76■■■□□ 2.99
CPNE1-205ENST00000401607 PHF23Q9BUL5 403 aaPredicted RBP33.75■■■□□ 2.99
CPNE1-205ENST00000401607 RRP7AQ9Y3A4 280 aaKnown RBP33.75■■■□□ 2.99
CPNE1-205ENST00000401607 DCCP43146 1447 aa33.75■■■□□ 2.99
CPNE1-205ENST00000401607 IRX6P78412 446 aaPredicted RBP33.75■■■□□ 2.99
CPNE1-205ENST00000401607 DUSP27Q5VZP5 1158 aa33.75■■■□□ 2.99
CPNE1-205ENST00000401607 WWC1Q8IX03 1113 aa33.75■■■□□ 2.99
CPNE1-205ENST00000401607 SLFN5Q08AF3 891 aa33.74■■■□□ 2.99
CPNE1-205ENST00000401607 NCBP3Q53F19 620 aaKnown RBP33.73■■■□□ 2.99
CPNE1-205ENST00000401607 NLRP6P59044 892 aa33.72■■■□□ 2.99
CPNE1-205ENST00000401607 TRMT2AQ8IZ69 625 aaKnown RBP33.72■■■□□ 2.99
CPNE1-205ENST00000401607 DMRT2Q9Y5R5 561 aa33.72■■■□□ 2.99
CPNE1-205ENST00000401607 NEUROD2Q15784 382 aa33.71■■■□□ 2.99
CPNE1-205ENST00000401607 SPINK5Q9NQ38 1064 aaPredicted RBP33.71■■■□□ 2.99
CPNE1-205ENST00000401607 RCAN3Q9UKA8 241 aa33.71■■■□□ 2.99
CPNE1-205ENST00000401607 KIF1AQ12756 1690 aa33.71■■■□□ 2.99
CPNE1-205ENST00000401607 PAK3O75914 559 aaPredicted RBP33.7■■■□□ 2.99
CPNE1-205ENST00000401607 MST1RQ04912 1400 aa33.7■■■□□ 2.99
CPNE1-205ENST00000401607 CCDC27Q2M243 656 aa33.7■■■□□ 2.99
CPNE1-205ENST00000401607 ABTB2Q8N961 1025 aa33.7■■■□□ 2.99
CPNE1-205ENST00000401607 SOX12O15370 315 aa33.7■■■□□ 2.98
CPNE1-205ENST00000401607 FCHSD2O94868 740 aa33.7■■■□□ 2.98
CPNE1-205ENST00000401607 RSPH6AQ9H0K4 717 aa33.7■■■□□ 2.98
CPNE1-205ENST00000401607 XIRP1Q702N8 1843 aaKnown RBP33.69■■■□□ 2.98
CPNE1-205ENST00000401607 PSME1Q06323 249 aa33.69■■■□□ 2.98
CPNE1-205ENST00000401607 MAP3K19Q56UN5 1328 aa33.68■■■□□ 2.98
CPNE1-205ENST00000401607 NUTM2GQ5VZR2 741 aa33.67■■■□□ 2.98
CPNE1-205ENST00000401607 PNNQ9H307 717 aaKnown RBP33.67■■■□□ 2.98
CPNE1-205ENST00000401607 MAPK8IP3Q9UPT6 1336 aa33.66■■■□□ 2.98
CPNE1-205ENST00000401607 ATF3P18847 181 aa33.66■■■□□ 2.98
CPNE1-205ENST00000401607 E9PSI1 815 aa33.65■■■□□ 2.98
CPNE1-205ENST00000401607 FOXO3O43524 673 aa33.65■■■□□ 2.98
CPNE1-205ENST00000401607 SBNO1A3KN83 1393 aa33.64■■■□□ 2.98
CPNE1-205ENST00000401607 TMPOP42166 694 aaKnown RBP33.64■■■□□ 2.98
CPNE1-205ENST00000401607 EIF4A2Q14240 407 aaKnown RBP33.64■■■□□ 2.98
CPNE1-205ENST00000401607 TRPM3Q9HCF6 1732 aaPredicted RBP33.63■■■□□ 2.97
CPNE1-205ENST00000401607 PRKAR2BP31323 418 aa33.63■■■□□ 2.97
CPNE1-205ENST00000401607 HMOX1P09601 288 aa33.62■■■□□ 2.97
CPNE1-205ENST00000401607 HSP90AB2PQ58FF8 381 aa33.62■■■□□ 2.97
CPNE1-205ENST00000401607 FLT4P35916 1363 aa33.61■■■□□ 2.97
CPNE1-205ENST00000401607 WDR63Q8IWG1 891 aa33.61■■■□□ 2.97
CPNE1-205ENST00000401607 RGPD1P0DJD0 1748 aa33.61■■■□□ 2.97
CPNE1-205ENST00000401607 ZNF335Q9H4Z2 1342 aaPredicted RBP33.61■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms