RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 SLC12A5Q9H2X9 1139 aa24.58■■□□□ 1.53
CTNS-203ENST00000399306 ANKRD36BQ8N2N9 1353 aa24.57■■□□□ 1.52
CTNS-203ENST00000399306 KTN1Q86UP2 1357 aaKnown RBP24.56■■□□□ 1.52
CTNS-203ENST00000399306 MED1Q15648 1581 aaPredicted RBP24.56■■□□□ 1.52
CTNS-203ENST00000399306 TTC21AQ8NDW8 1320 aa24.56■■□□□ 1.52
CTNS-203ENST00000399306 MYOM1P52179 1685 aa24.56■■□□□ 1.52
CTNS-203ENST00000399306 NRKQ7Z2Y5 1582 aa24.55■■□□□ 1.52
CTNS-203ENST00000399306 EDC4Q6P2E9 1401 aaKnown RBP24.54■■□□□ 1.52
CTNS-203ENST00000399306 A0A1W2PP64 1363 aa24.54■■□□□ 1.52
CTNS-203ENST00000399306 PAK3O75914 559 aaPredicted RBP24.52■■□□□ 1.52
CTNS-203ENST00000399306 TTC21BQ7Z4L5 1316 aa24.52■■□□□ 1.52
CTNS-203ENST00000399306 C11orf95C9JLR9 678 aaPredicted RBP24.49■■□□□ 1.51
CTNS-203ENST00000399306 LRP6O75581 1613 aa24.48■■□□□ 1.51
CTNS-203ENST00000399306 NLRP13Q86W25 1043 aa24.48■■□□□ 1.51
CTNS-203ENST00000399306 ABTB2Q8N961 1025 aa24.48■■□□□ 1.51
CTNS-203ENST00000399306 ABCA3Q99758 1704 aa24.48■■□□□ 1.51
CTNS-203ENST00000399306 CRYBG1Q9Y4K1 1723 aa24.48■■□□□ 1.51
CTNS-203ENST00000399306 USP54Q70EL1 1684 aa24.47■■□□□ 1.51
CTNS-203ENST00000399306 KIF7Q2M1P5 1343 aa24.47■■□□□ 1.51
CTNS-203ENST00000399306 LMOD2Q6P5Q4 547 aa24.47■■□□□ 1.51
CTNS-203ENST00000399306 PIK3C2AO00443 1686 aa24.46■■□□□ 1.51
CTNS-203ENST00000399306 USP31Q70CQ4 1352 aa24.46■■□□□ 1.51
CTNS-203ENST00000399306 USP19O94966 1318 aa24.46■■□□□ 1.51
CTNS-203ENST00000399306 MARF1Q9Y4F3 1742 aaKnown RBP24.46■■□□□ 1.51
CTNS-203ENST00000399306 CCDC7Q96M83 1385 aa24.44■■□□□ 1.5
CTNS-203ENST00000399306 PHRF1Q9P1Y6 1649 aaKnown RBP24.43■■□□□ 1.5
CTNS-203ENST00000399306 NUTM2BA6NNL0 878 aaPredicted RBP24.42■■□□□ 1.5
CTNS-203ENST00000399306 NUTM2EB1AL46 878 aaPredicted RBP24.42■■□□□ 1.5
CTNS-203ENST00000399306 NUTM2AQ8IVF1 878 aaPredicted RBP24.42■■□□□ 1.5
CTNS-203ENST00000399306 SLIT3O75094 1523 aa24.41■■□□□ 1.5
CTNS-203ENST00000399306 NLRP6P59044 892 aa24.41■■□□□ 1.5
CTNS-203ENST00000399306 WASHC2AQ641Q2 1341 aa24.39■■□□□ 1.5
CTNS-203ENST00000399306 MEX3CQ5U5Q3 659 aaKnown RBP24.39■■□□□ 1.49
CTNS-203ENST00000399306 POLR3GLQ9BT43 218 aa24.39■■□□□ 1.49
CTNS-203ENST00000399306 HAP1P54257 671 aaPredicted RBP24.38■■□□□ 1.49
CTNS-203ENST00000399306 CARD14Q9BXL6 1004 aa24.38■■□□□ 1.49
CTNS-203ENST00000399306 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.37■■□□□ 1.49
CTNS-203ENST00000399306 KCNH5Q8NCM2 988 aa24.37■■□□□ 1.49
CTNS-203ENST00000399306 CABLES1Q8TDN4 633 aa24.37■■□□□ 1.49
CTNS-203ENST00000399306 OVOS2A0A0J9YW53 1432 aa24.36■■□□□ 1.49
CTNS-203ENST00000399306 OVOS2Q6IE36 1432 aa24.36■■□□□ 1.49
CTNS-203ENST00000399306 CPDO75976 1380 aa24.36■■□□□ 1.49
CTNS-203ENST00000399306 NSD3Q9BZ95 1437 aa24.35■■□□□ 1.49
CTNS-203ENST00000399306 GCP02774 474 aa24.35■■□□□ 1.49
CTNS-203ENST00000399306 FNBP4Q8N3X1 1017 aaPredicted RBP24.35■■□□□ 1.49
CTNS-203ENST00000399306 PANK3Q9H999 370 aa24.35■■□□□ 1.49
CTNS-203ENST00000399306 KIF20BQ96Q89 1820 aa24.34■■□□□ 1.49
CTNS-203ENST00000399306 ADAMTS2O95450 1211 aa24.34■■□□□ 1.49
CTNS-203ENST00000399306 NUTM2GQ5VZR2 741 aa24.34■■□□□ 1.49
CTNS-203ENST00000399306 NME9Q86XW9 330 aa24.34■■□□□ 1.49
CTNS-203ENST00000399306 FYB1O15117 783 aa24.33■■□□□ 1.49
CTNS-203ENST00000399306 COL14A1Q05707 1796 aaKnown RBP24.33■■□□□ 1.49
CTNS-203ENST00000399306 CGNL1Q0VF96 1302 aa24.33■■□□□ 1.48
CTNS-203ENST00000399306 NWD2Q9ULI1 1742 aa24.32■■□□□ 1.48
CTNS-203ENST00000399306 PHF23Q9BUL5 403 aaPredicted RBP24.32■■□□□ 1.48
CTNS-203ENST00000399306 SLIT2O94813 1529 aa24.31■■□□□ 1.48
CTNS-203ENST00000399306 ZNF772Q68DY9 489 aaPredicted RBP24.31■■□□□ 1.48
CTNS-203ENST00000399306 NGLY1Q96IV0 654 aa24.31■■□□□ 1.48
CTNS-203ENST00000399306 C8orf37Q96NL8 207 aa24.31■■□□□ 1.48
CTNS-203ENST00000399306 NSD2O96028 1365 aa24.3■■□□□ 1.48
CTNS-203ENST00000399306 COG3Q96JB2 828 aa24.3■■□□□ 1.48
CTNS-203ENST00000399306 NFAT5O94916 1531 aa24.3■■□□□ 1.48
CTNS-203ENST00000399306 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.3■■□□□ 1.48
CTNS-203ENST00000399306 ABCC6O95255 1503 aa24.29■■□□□ 1.48
CTNS-203ENST00000399306 AFF2P51816 1311 aa24.29■■□□□ 1.48
CTNS-203ENST00000399306 KIAA0232Q92628 1395 aa24.28■■□□□ 1.48
CTNS-203ENST00000399306 FAM83GA6ND36 823 aa24.27■■□□□ 1.48
CTNS-203ENST00000399306 PRDM11Q9NQV5 511 aa24.27■■□□□ 1.48
CTNS-203ENST00000399306 PLCH1Q4KWH8 1693 aa24.27■■□□□ 1.48
CTNS-203ENST00000399306 ANKRD26Q9UPS8 1709 aa24.27■■□□□ 1.48
CTNS-203ENST00000399306 RGS17Q9UGC6 210 aaPredicted RBP24.26■■□□□ 1.47
CTNS-203ENST00000399306 ZRANB1Q9UGI0 708 aa24.26■■□□□ 1.47
CTNS-203ENST00000399306 KNSTRNQ9Y448 316 aa24.26■■□□□ 1.47
CTNS-203ENST00000399306 PER1O15534 1290 aaPredicted RBP24.25■■□□□ 1.47
CTNS-203ENST00000399306 ARHGEF25Q86VW2 580 aa24.25■■□□□ 1.47
CTNS-203ENST00000399306 AATKQ6ZMQ8 1374 aa24.25■■□□□ 1.47
CTNS-203ENST00000399306 BCL9LQ86UU0 1499 aa24.25■■□□□ 1.47
CTNS-203ENST00000399306 ZC3H6P61129 1189 aaKnown RBP24.24■■□□□ 1.47
CTNS-203ENST00000399306 NPC1L1Q9UHC9 1359 aa24.24■■□□□ 1.47
CTNS-203ENST00000399306 LMO7Q8WWI1 1683 aa24.24■■□□□ 1.47
CTNS-203ENST00000399306 PLEKHG5O94827 1062 aa24.23■■□□□ 1.47
CTNS-203ENST00000399306 GGNBP2Q9H3C7 697 aa24.23■■□□□ 1.47
CTNS-203ENST00000399306 USP21Q9UK80 565 aa24.23■■□□□ 1.47
CTNS-203ENST00000399306 UNC5CLQ8IV45 518 aa24.22■■□□□ 1.47
CTNS-203ENST00000399306 COL18A1P39060 1754 aa24.21■■□□□ 1.47
CTNS-203ENST00000399306 NRAPQ86VF7 1730 aa24.21■■□□□ 1.47
CTNS-203ENST00000399306 AMER1Q5JTC6 1135 aaPredicted RBP24.2■■□□□ 1.46
CTNS-203ENST00000399306 TRPC5Q9UL62 973 aaPredicted RBP24.2■■□□□ 1.46
CTNS-203ENST00000399306 ATRNO75882 1429 aa24.19■■□□□ 1.46
CTNS-203ENST00000399306 KIF24Q5T7B8 1368 aa24.19■■□□□ 1.46
CTNS-203ENST00000399306 LTN1O94822 1766 aa24.19■■□□□ 1.46
CTNS-203ENST00000399306 BTG4Q9NY30 223 aa24.18■■□□□ 1.46
CTNS-203ENST00000399306 CAMTA1Q9Y6Y1 1673 aa24.17■■□□□ 1.46
CTNS-203ENST00000399306 CHRNA2Q15822 529 aa24.16■■□□□ 1.46
CTNS-203ENST00000399306 VPS72Q15906 364 aa24.16■■□□□ 1.46
CTNS-203ENST00000399306 RTL1A6NKG5 1358 aa24.16■■□□□ 1.46
CTNS-203ENST00000399306 QTRT2Q9H974 415 aaKnown RBP24.15■■□□□ 1.46
CTNS-203ENST00000399306 BLMP54132 1417 aaPredicted RBP24.14■■□□□ 1.45
CTNS-203ENST00000399306 POTEAQ6S8J7 498 aa24.14■■□□□ 1.45
CTNS-203ENST00000399306 SOX12O15370 315 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms