RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 XIRP1Q702N8 1843 aaKnown RBP17.37■□□□□ 0.37
SMIM11A-201ENST00000399292 FAM135BQ49AJ0 1406 aa17.37■□□□□ 0.37
SMIM11A-201ENST00000399292 C19orf44Q9H6X5 657 aa17.36■□□□□ 0.37
SMIM11A-201ENST00000399292 METP08581 1390 aa17.36■□□□□ 0.37
SMIM11A-201ENST00000399292 PTPRUQ92729 1446 aa17.36■□□□□ 0.37
SMIM11A-201ENST00000399292 SETBP1Q9Y6X0 1596 aa17.36■□□□□ 0.37
SMIM11A-201ENST00000399292 CDAN1Q8IWY9 1227 aa17.35■□□□□ 0.37
SMIM11A-201ENST00000399292 TAOK2Q9UL54 1235 aa17.35■□□□□ 0.37
SMIM11A-201ENST00000399292 ATF3P18847 181 aa17.34■□□□□ 0.37
SMIM11A-201ENST00000399292 CADPS2Q86UW7 1296 aa17.34■□□□□ 0.37
SMIM11A-201ENST00000399292 NRXN3Q9Y4C0 1643 aa17.32■□□□□ 0.36
SMIM11A-201ENST00000399292 SPATA31E1Q6ZUB1 1445 aa17.3■□□□□ 0.36
SMIM11A-201ENST00000399292 ECM2O94769 699 aaPredicted RBP17.3■□□□□ 0.36
SMIM11A-201ENST00000399292 ANKRD30BQ9BXX2 1392 aa17.29■□□□□ 0.36
SMIM11A-201ENST00000399292 ADGRF5Q8IZF2 1346 aa17.29■□□□□ 0.36
SMIM11A-201ENST00000399292 MS4A4AQ96JQ5 239 aa17.27■□□□□ 0.36
SMIM11A-201ENST00000399292 BCL11BQ9C0K0 894 aaPredicted RBP17.27■□□□□ 0.36
SMIM11A-201ENST00000399292 PHF8Q9UPP1 1060 aa17.27■□□□□ 0.36
SMIM11A-201ENST00000399292 MARVELD3Q96A59 401 aa17.26■□□□□ 0.35
SMIM11A-201ENST00000399292 MICALL2Q8IY33 904 aa17.24■□□□□ 0.35
SMIM11A-201ENST00000399292 XRN1Q8IZH2 1706 aaKnown RBP17.24■□□□□ 0.35
SMIM11A-201ENST00000399292 MED1Q15648 1581 aaPredicted RBP17.23■□□□□ 0.35
SMIM11A-201ENST00000399292 ROBO1Q9Y6N7 1651 aa17.23■□□□□ 0.35
SMIM11A-201ENST00000399292 PPLO60437 1756 aa17.23■□□□□ 0.35
SMIM11A-201ENST00000399292 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.22■□□□□ 0.35
SMIM11A-201ENST00000399292 STK26Q9P289 416 aa17.22■□□□□ 0.35
SMIM11A-201ENST00000399292 STK24Q9Y6E0 443 aa17.22■□□□□ 0.35
SMIM11A-201ENST00000399292 DCCP43146 1447 aa17.21■□□□□ 0.35
SMIM11A-201ENST00000399292 ROBO2Q9HCK4 1378 aa17.21■□□□□ 0.35
SMIM11A-201ENST00000399292 TMEM132EQ6IEE7 984 aa17.2■□□□□ 0.34
SMIM11A-201ENST00000399292 BRINP3Q76B58 766 aa17.2■□□□□ 0.34
SMIM11A-201ENST00000399292 PTCH1Q13635 1447 aa17.2■□□□□ 0.34
SMIM11A-201ENST00000399292 NLRP6P59044 892 aa17.19■□□□□ 0.34
SMIM11A-201ENST00000399292 C14orf93Q9H972 538 aaKnown RBP17.19■□□□□ 0.34
SMIM11A-201ENST00000399292 ADGRL3Q9HAR2 1447 aa17.19■□□□□ 0.34
SMIM11A-201ENST00000399292 HOXB3P14651 431 aaPredicted RBP17.18■□□□□ 0.34
SMIM11A-201ENST00000399292 PIK3C2GO75747 1445 aa17.18■□□□□ 0.34
SMIM11A-201ENST00000399292 STK25O00506 426 aa17.17■□□□□ 0.34
SMIM11A-201ENST00000399292 EMP3P54852 163 aa17.17■□□□□ 0.34
SMIM11A-201ENST00000399292 CFAP70Q5T0N1 1121 aa17.17■□□□□ 0.34
SMIM11A-201ENST00000399292 PRAG1Q86YV5 1406 aa17.17■□□□□ 0.34
SMIM11A-201ENST00000399292 KDM2AQ9Y2K7 1162 aa17.17■□□□□ 0.34
SMIM11A-201ENST00000399292 LRPPRCP42704 1394 aaKnown RBP17.16■□□□□ 0.34
SMIM11A-201ENST00000399292 RGL2O15211 777 aa17.16■□□□□ 0.34
SMIM11A-201ENST00000399292 DCAF11Q8TEB1 546 aa17.16■□□□□ 0.34
SMIM11A-201ENST00000399292 SETD1AO15047 1707 aaKnown RBP17.16■□□□□ 0.34
SMIM11A-201ENST00000399292 ABCC11Q96J66 1382 aa17.15■□□□□ 0.34
SMIM11A-201ENST00000399292 MST1RQ04912 1400 aa17.15■□□□□ 0.34
SMIM11A-201ENST00000399292 WAPLQ7Z5K2 1190 aa17.15■□□□□ 0.34
SMIM11A-201ENST00000399292 FBXO22Q8NEZ5 403 aa17.15■□□□□ 0.34
SMIM11A-201ENST00000399292 STAC3Q96MF2 364 aa17.15■□□□□ 0.34
SMIM11A-201ENST00000399292 JCADQ9P266 1359 aa17.15■□□□□ 0.34
SMIM11A-201ENST00000399292 DHX57Q6P158 1386 aaKnown RBP17.14■□□□□ 0.33
SMIM11A-201ENST00000399292 IFT172Q9UG01 1749 aa17.13■□□□□ 0.33
SMIM11A-201ENST00000399292 TMEM92Q6UXU6 159 aa17.13■□□□□ 0.33
SMIM11A-201ENST00000399292 SIRT1Q96EB6 747 aa17.13■□□□□ 0.33
SMIM11A-201ENST00000399292 MYOM2P54296 1465 aa17.12■□□□□ 0.33
SMIM11A-201ENST00000399292 NRXN1Q9ULB1 1477 aa17.12■□□□□ 0.33
SMIM11A-201ENST00000399292 PHLPP1O60346 1717 aa17.12■□□□□ 0.33
SMIM11A-201ENST00000399292 YTHDC2Q9H6S0 1430 aaKnown RBP17.12■□□□□ 0.33
SMIM11A-201ENST00000399292 DOK7Q18PE1 504 aa17.11■□□□□ 0.33
SMIM11A-201ENST00000399292 TECPR2O15040 1411 aa17.11■□□□□ 0.33
SMIM11A-201ENST00000399292 C1orf167Q5SNV9 1468 aa17.11■□□□□ 0.33
SMIM11A-201ENST00000399292 LRRC59Q96AG4 307 aaKnown RBP17.1■□□□□ 0.33
SMIM11A-201ENST00000399292 ORAI2Q96SN7 254 aa17.1■□□□□ 0.33
SMIM11A-201ENST00000399292 MFRPQ9BY79 579 aa17.1■□□□□ 0.33
SMIM11A-201ENST00000399292 DDX17Q92841 729 aaKnown RBP17.09■□□□□ 0.33
SMIM11A-201ENST00000399292 SPATA31A6Q5VVP1 1343 aa17.09■□□□□ 0.33
SMIM11A-201ENST00000399292 ASXL1Q8IXJ9 1541 aa17.09■□□□□ 0.33
SMIM11A-201ENST00000399292 AHDC1Q5TGY3 1603 aaPredicted RBP17.09■□□□□ 0.33
SMIM11A-201ENST00000399292 NALCNQ8IZF0 1738 aa17.08■□□□□ 0.32
SMIM11A-201ENST00000399292 ZNF710Q8N1W2 664 aa17.08■□□□□ 0.32
SMIM11A-201ENST00000399292 COL16A1Q07092 1604 aaPredicted RBP17.07■□□□□ 0.32
SMIM11A-201ENST00000399292 PLEKHH1Q9ULM0 1364 aa17.07■□□□□ 0.32
SMIM11A-201ENST00000399292 ESCO1Q5FWF5 840 aa17.07■□□□□ 0.32
SMIM11A-201ENST00000399292 RGS17Q9UGC6 210 aaPredicted RBP17.07■□□□□ 0.32
SMIM11A-201ENST00000399292 PRAM1Q96QH2 718 aa17.06■□□□□ 0.32
SMIM11A-201ENST00000399292 POGKQ9P215 609 aa17.06■□□□□ 0.32
SMIM11A-201ENST00000399292 NUTM2FA1L443 756 aa17.05■□□□□ 0.32
SMIM11A-201ENST00000399292 FAM205CA6NFA0 338 aa17.04■□□□□ 0.32
SMIM11A-201ENST00000399292 HOXB1P14653 301 aaPredicted RBP17.04■□□□□ 0.32
SMIM11A-201ENST00000399292 SAFB2Q14151 953 aaKnown RBP eCLIP17.04■□□□□ 0.32
SMIM11A-201ENST00000399292 MEX3CQ5U5Q3 659 aaKnown RBP17.04■□□□□ 0.32
SMIM11A-201ENST00000399292 HS3ST6Q96QI5 342 aa17.04■□□□□ 0.32
SMIM11A-201ENST00000399292 TRAK1Q9UPV9 953 aa17.04■□□□□ 0.32
SMIM11A-201ENST00000399292 NUTM2BA6NNL0 878 aaPredicted RBP17.03■□□□□ 0.32
SMIM11A-201ENST00000399292 NUTM2EB1AL46 878 aaPredicted RBP17.03■□□□□ 0.32
SMIM11A-201ENST00000399292 NUTM2AQ8IVF1 878 aaPredicted RBP17.03■□□□□ 0.32
SMIM11A-201ENST00000399292 LAMC1P11047 1609 aa17.03■□□□□ 0.32
SMIM11A-201ENST00000399292 SOS2Q07890 1332 aaPredicted RBP17.02■□□□□ 0.32
SMIM11A-201ENST00000399292 POTEB3A0JP26 581 aa17.02■□□□□ 0.32
SMIM11A-201ENST00000399292 POTEBQ6S5H4 581 aa17.02■□□□□ 0.32
SMIM11A-201ENST00000399292 RIMBP2O15034 1052 aa17.01■□□□□ 0.31
SMIM11A-201ENST00000399292 FOXO3O43524 673 aa17.01■□□□□ 0.31
SMIM11A-201ENST00000399292 CDC42BPGQ6DT37 1551 aa17.01■□□□□ 0.31
SMIM11A-201ENST00000399292 NPHP3Q7Z494 1330 aa17■□□□□ 0.31
SMIM11A-201ENST00000399292 TRIM26Q12899 539 aaPredicted RBP17■□□□□ 0.31
SMIM11A-201ENST00000399292 KNDC1Q76NI1 1749 aa17■□□□□ 0.31
SMIM11A-201ENST00000399292 POTEAQ6S8J7 498 aa16.99■□□□□ 0.31
SMIM11A-201ENST00000399292 NHSL1Q5SYE7 1610 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms