RNA–Protein interactions for RNA: ENST00000399220.2

CX3CR1-202, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CR1, Length 3,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-202ENST00000399220 USP6P35125 1406 aa9.18□□□□□ -0.94
CX3CR1-202ENST00000399220 DCCP43146 1447 aa9.18□□□□□ -0.94
CX3CR1-202ENST00000399220 TRPM3Q9HCF6 1732 aaPredicted RBP9.18□□□□□ -0.94
CX3CR1-202ENST00000399220 AMOTL2Q9Y2J4 779 aa9.18□□□□□ -0.94
CX3CR1-202ENST00000399220 XIRP1Q702N8 1843 aaKnown RBP9.17□□□□□ -0.94
CX3CR1-202ENST00000399220 SRPK2P78362 688 aaKnown RBP9.17□□□□□ -0.94
CX3CR1-202ENST00000399220 FYB1O15117 783 aa9.17□□□□□ -0.94
CX3CR1-202ENST00000399220 FAM9BQ8IZU0 186 aa9.17□□□□□ -0.94
CX3CR1-202ENST00000399220 NUDT16Q96DE0 195 aaKnown RBP9.17□□□□□ -0.94
CX3CR1-202ENST00000399220 LMTK3Q96Q04 1460 aa9.16□□□□□ -0.94
CX3CR1-202ENST00000399220 TTC21AQ8NDW8 1320 aa9.15□□□□□ -0.94
CX3CR1-202ENST00000399220 CABP1Q9NZU7 370 aa9.15□□□□□ -0.94
CX3CR1-202ENST00000399220 MORC1Q86VD1 984 aa9.15□□□□□ -0.95
CX3CR1-202ENST00000399220 PEAK1Q9H792 1746 aa9.15□□□□□ -0.95
CX3CR1-202ENST00000399220 KIF24Q5T7B8 1368 aa9.14□□□□□ -0.95
CX3CR1-202ENST00000399220 KCNA6P17658 529 aa9.14□□□□□ -0.95
CX3CR1-202ENST00000399220 NUDCQ9Y266 331 aa9.14□□□□□ -0.95
CX3CR1-202ENST00000399220 TRMT2AQ8IZ69 625 aaKnown RBP9.14□□□□□ -0.95
CX3CR1-202ENST00000399220 CCDC27Q2M243 656 aa9.14□□□□□ -0.95
CX3CR1-202ENST00000399220 ADAMTS8Q9UP79 889 aa9.13□□□□□ -0.95
CX3CR1-202ENST00000399220 ALS2Q96Q42 1657 aa9.13□□□□□ -0.95
CX3CR1-202ENST00000399220 CAMTA1Q9Y6Y1 1673 aa9.13□□□□□ -0.95
CX3CR1-202ENST00000399220 CRYBG1Q9Y4K1 1723 aa9.13□□□□□ -0.95
CX3CR1-202ENST00000399220 SLIT3O75094 1523 aa9.12□□□□□ -0.95
CX3CR1-202ENST00000399220 ABCC6O95255 1503 aa9.12□□□□□ -0.95
CX3CR1-202ENST00000399220 SLC26A8Q96RN1 970 aa9.12□□□□□ -0.95
CX3CR1-202ENST00000399220 SAFB2Q14151 953 aaKnown RBP eCLIP9.11□□□□□ -0.95
CX3CR1-202ENST00000399220 CFAP53Q96M91 514 aa9.11□□□□□ -0.95
CX3CR1-202ENST00000399220 WDR43Q15061 677 aaKnown RBP eCLIP9.1□□□□□ -0.95
CX3CR1-202ENST00000399220 NFAT5O94916 1531 aa9.1□□□□□ -0.95
CX3CR1-202ENST00000399220 TTC21BQ7Z4L5 1316 aa9.1□□□□□ -0.95
CX3CR1-202ENST00000399220 SUPT16HQ9Y5B9 1047 aaKnown RBP9.09□□□□□ -0.95
CX3CR1-202ENST00000399220 MED1Q15648 1581 aaPredicted RBP9.09□□□□□ -0.95
CX3CR1-202ENST00000399220 ACEP12821 1306 aa9.09□□□□□ -0.95
CX3CR1-202ENST00000399220 LTN1O94822 1766 aa9.09□□□□□ -0.95
CX3CR1-202ENST00000399220 MTHFSP49914 203 aa9.09□□□□□ -0.95
CX3CR1-202ENST00000399220 PLEKHF1Q96S99 279 aa9.09□□□□□ -0.95
CX3CR1-202ENST00000399220 RUNDC1Q96C34 613 aa9.08□□□□□ -0.96
CX3CR1-202ENST00000399220 DLG5Q8TDM6 1919 aa9.08□□□□□ -0.96
CX3CR1-202ENST00000399220 RTL1A6NKG5 1358 aa9.08□□□□□ -0.96
CX3CR1-202ENST00000399220 KDM4FA0A1W2PPD8 638 aa9.07□□□□□ -0.96
CX3CR1-202ENST00000399220 POLKQ9UBT6 870 aa9.07□□□□□ -0.96
CX3CR1-202ENST00000399220 LMO7Q8WWI1 1683 aa9.07□□□□□ -0.96
CX3CR1-202ENST00000399220 BCANQ96GW7 911 aa9.07□□□□□ -0.96
CX3CR1-202ENST00000399220 LRRC37A3O60309 1634 aa9.07□□□□□ -0.96
CX3CR1-202ENST00000399220 PNNQ9H307 717 aaKnown RBP9.07□□□□□ -0.96
CX3CR1-202ENST00000399220 NCAPD2Q15021 1401 aa9.06□□□□□ -0.96
CX3CR1-202ENST00000399220 FAM208AQ9UK61 1670 aaKnown RBP9.06□□□□□ -0.96
CX3CR1-202ENST00000399220 WDR63Q8IWG1 891 aa9.06□□□□□ -0.96
CX3CR1-202ENST00000399220 GGNBP2Q9H3C7 697 aa9.06□□□□□ -0.96
CX3CR1-202ENST00000399220 PLEKHG2Q9H7P9 1386 aa9.06□□□□□ -0.96
CX3CR1-202ENST00000399220 SLFN5Q08AF3 891 aa9.05□□□□□ -0.96
CX3CR1-202ENST00000399220 IL16Q14005 1332 aa9.05□□□□□ -0.96
CX3CR1-202ENST00000399220 C1orf167Q5SNV9 1468 aa9.05□□□□□ -0.96
CX3CR1-202ENST00000399220 NCKAP5LQ9HCH0 1330 aa9.05□□□□□ -0.96
CX3CR1-202ENST00000399220 COG3Q96JB2 828 aa9.05□□□□□ -0.96
CX3CR1-202ENST00000399220 FCHSD2O94868 740 aa9.05□□□□□ -0.96
CX3CR1-202ENST00000399220 IL13P35225 146 aa9.05□□□□□ -0.96
CX3CR1-202ENST00000399220 NHSL1Q5SYE7 1610 aa9.04□□□□□ -0.96
CX3CR1-202ENST00000399220 SBNO1A3KN83 1393 aa9.04□□□□□ -0.96
CX3CR1-202ENST00000399220 DUSP27Q5VZP5 1158 aa9.04□□□□□ -0.96
CX3CR1-202ENST00000399220 ARHGEF10O15013 1369 aa9.04□□□□□ -0.96
CX3CR1-202ENST00000399220 PLPPR3Q6T4P5 718 aa9.04□□□□□ -0.96
CX3CR1-202ENST00000399220 NME9Q86XW9 330 aa9.04□□□□□ -0.96
CX3CR1-202ENST00000399220 COL18A1P39060 1754 aa9.04□□□□□ -0.96
CX3CR1-202ENST00000399220 KDRP35968 1356 aa9.03□□□□□ -0.96
CX3CR1-202ENST00000399220 DIAPH1O60610 1272 aaKnown RBP9.03□□□□□ -0.96
CX3CR1-202ENST00000399220 E9PSI1 815 aa9.03□□□□□ -0.96
CX3CR1-202ENST00000399220 GOLGA2Q08379 1002 aa9.03□□□□□ -0.96
CX3CR1-202ENST00000399220 ADAMTS7Q9UKP4 1686 aa9.03□□□□□ -0.96
CX3CR1-202ENST00000399220 ABCA3Q99758 1704 aa9.02□□□□□ -0.97
CX3CR1-202ENST00000399220 USP19O94966 1318 aa9.02□□□□□ -0.97
CX3CR1-202ENST00000399220 RSPH6AQ9H0K4 717 aa9.02□□□□□ -0.97
CX3CR1-202ENST00000399220 PXDNQ92626 1479 aa9.02□□□□□ -0.97
CX3CR1-202ENST00000399220 WWC1Q8IX03 1113 aa9.02□□□□□ -0.97
CX3CR1-202ENST00000399220 FLT4P35916 1363 aa9.02□□□□□ -0.97
CX3CR1-202ENST00000399220 CT47B1P0C2W7 299 aaPredicted RBP9.01□□□□□ -0.97
CX3CR1-202ENST00000399220 C19orf44Q9H6X5 657 aa9.01□□□□□ -0.97
CX3CR1-202ENST00000399220 PHF8Q9UPP1 1060 aa9.01□□□□□ -0.97
CX3CR1-202ENST00000399220 APAF1O14727 1248 aa9□□□□□ -0.97
CX3CR1-202ENST00000399220 NEFLP07196 543 aa9□□□□□ -0.97
CX3CR1-202ENST00000399220 TCP11L2Q8N4U5 519 aa9□□□□□ -0.97
CX3CR1-202ENST00000399220 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.99□□□□□ -0.97
CX3CR1-202ENST00000399220 RCAN3Q9UKA8 241 aa8.99□□□□□ -0.97
CX3CR1-202ENST00000399220 TMEM94Q12767 1356 aa8.99□□□□□ -0.97
CX3CR1-202ENST00000399220 RRP1P56182 461 aaKnown RBP8.98□□□□□ -0.97
CX3CR1-202ENST00000399220 CNGB1Q14028 1251 aaPredicted RBP8.98□□□□□ -0.97
CX3CR1-202ENST00000399220 SENP3Q9H4L4 574 aaPredicted RBP8.98□□□□□ -0.97
CX3CR1-202ENST00000399220 COL22A1Q8NFW1 1626 aaPredicted RBP8.98□□□□□ -0.97
CX3CR1-202ENST00000399220 TMPOP42166 694 aaKnown RBP8.98□□□□□ -0.97
CX3CR1-202ENST00000399220 CDCA7LQ96GN5 454 aa8.98□□□□□ -0.97
CX3CR1-202ENST00000399220 ZRANB1Q9UGI0 708 aa8.98□□□□□ -0.97
CX3CR1-202ENST00000399220 TRIM35Q9UPQ4 493 aa8.98□□□□□ -0.97
CX3CR1-202ENST00000399220 IGSF1Q8N6C5 1336 aa8.98□□□□□ -0.97
CX3CR1-202ENST00000399220 VIRMAQ69YN4 1812 aaKnown RBP8.98□□□□□ -0.97
CX3CR1-202ENST00000399220 FKBP8Q14318 412 aa8.98□□□□□ -0.97
CX3CR1-202ENST00000399220 PPP4R2Q9NY27 417 aa8.97□□□□□ -0.97
CX3CR1-202ENST00000399220 EMILIN1Q9Y6C2 1016 aa8.97□□□□□ -0.97
CX3CR1-202ENST00000399220 N4BP2Q86UW6 1770 aaPredicted RBP8.97□□□□□ -0.97
CX3CR1-202ENST00000399220 NGDNQ8NEJ9 315 aaKnown RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms