RNA–Protein interactions for RNA: ENST00000399026.1

BRCC3-205, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 456 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-205ENST00000399026 PHLPP1O60346 1717 aa12.02□□□□□ -0.49
BRCC3-205ENST00000399026 TIE1P35590 1138 aa12.01□□□□□ -0.49
BRCC3-205ENST00000399026 NBPF1Q3BBV0 1214 aa12.01□□□□□ -0.49
BRCC3-205ENST00000399026 IFNL1Q8IU54 200 aa12.01□□□□□ -0.49
BRCC3-205ENST00000399026 CCER1Q8TC90 406 aaPredicted RBP12.01□□□□□ -0.49
BRCC3-205ENST00000399026 C19orf44Q9H6X5 657 aa12.01□□□□□ -0.49
BRCC3-205ENST00000399026 TRAK1Q9UPV9 953 aa12.01□□□□□ -0.49
BRCC3-205ENST00000399026 RALGAPBQ86X10 1494 aa12.01□□□□□ -0.49
BRCC3-205ENST00000399026 NHSL1Q5SYE7 1610 aa12□□□□□ -0.49
BRCC3-205ENST00000399026 PYGBP11216 843 aa12□□□□□ -0.49
BRCC3-205ENST00000399026 ATF3P18847 181 aa12□□□□□ -0.49
BRCC3-205ENST00000399026 NBPF8Q3BBV2 869 aa12□□□□□ -0.49
BRCC3-205ENST00000399026 PRAM1Q96QH2 718 aa12□□□□□ -0.49
BRCC3-205ENST00000399026 ROCK2O75116 1388 aaKnown RBP12□□□□□ -0.49
BRCC3-205ENST00000399026 RGPD8O14715 1765 aaPredicted RBP12□□□□□ -0.49
BRCC3-205ENST00000399026 C7P10643 843 aa11.99□□□□□ -0.49
BRCC3-205ENST00000399026 CADPS2Q86UW7 1296 aa11.99□□□□□ -0.49
BRCC3-205ENST00000399026 SLC39A7Q92504 469 aa11.99□□□□□ -0.49
BRCC3-205ENST00000399026 COL16A1Q07092 1604 aaPredicted RBP11.99□□□□□ -0.49
BRCC3-205ENST00000399026 AHDC1Q5TGY3 1603 aaPredicted RBP11.99□□□□□ -0.49
BRCC3-205ENST00000399026 USP32Q8NFA0 1604 aa11.99□□□□□ -0.49
BRCC3-205ENST00000399026 C1orf167Q5SNV9 1468 aa11.98□□□□□ -0.49
BRCC3-205ENST00000399026 HSPA1LP34931 641 aa11.98□□□□□ -0.49
BRCC3-205ENST00000399026 METRNQ9UJH8 293 aa11.98□□□□□ -0.49
BRCC3-205ENST00000399026 CLSPNQ9HAW4 1339 aa11.97□□□□□ -0.49
BRCC3-205ENST00000399026 TTLL13PA6NNM8 815 aa11.97□□□□□ -0.49
BRCC3-205ENST00000399026 GSE1Q14687 1217 aa11.97□□□□□ -0.49
BRCC3-205ENST00000399026 POGKQ9P215 609 aa11.97□□□□□ -0.49
BRCC3-205ENST00000399026 SLAIN2Q9P270 581 aa11.97□□□□□ -0.49
BRCC3-205ENST00000399026 MINK1Q8N4C8 1332 aaPredicted RBP11.96□□□□□ -0.49
BRCC3-205ENST00000399026 NUTM2FA1L443 756 aa11.96□□□□□ -0.49
BRCC3-205ENST00000399026 SPOCK2Q92563 424 aa11.96□□□□□ -0.49
BRCC3-205ENST00000399026 HIRIP3Q9BW71 556 aaPredicted RBP11.96□□□□□ -0.49
BRCC3-205ENST00000399026 KIF1AQ12756 1690 aa11.96□□□□□ -0.5
BRCC3-205ENST00000399026 GPRASP1Q5JY77 1395 aa11.95□□□□□ -0.5
BRCC3-205ENST00000399026 TOPAZ1Q8N9V7 1692 aa11.95□□□□□ -0.5
BRCC3-205ENST00000399026 BRINP3Q76B58 766 aa11.95□□□□□ -0.5
BRCC3-205ENST00000399026 TULP4Q9NRJ4 1543 aa11.95□□□□□ -0.5
BRCC3-205ENST00000399026 ITSN1Q15811 1721 aa11.94□□□□□ -0.5
BRCC3-205ENST00000399026 SIRT1Q96EB6 747 aa11.94□□□□□ -0.5
BRCC3-205ENST00000399026 ATP7BP35670 1465 aa11.92□□□□□ -0.5
BRCC3-205ENST00000399026 DDX17Q92841 729 aaKnown RBP11.92□□□□□ -0.5
BRCC3-205ENST00000399026 MED1Q15648 1581 aaPredicted RBP11.92□□□□□ -0.5
BRCC3-205ENST00000399026 EIF3AQ14152 1382 aaKnown RBP11.92□□□□□ -0.5
BRCC3-205ENST00000399026 CENPJQ9HC77 1338 aaPredicted RBP11.91□□□□□ -0.5
BRCC3-205ENST00000399026 SHPRHQ149N8 1683 aa11.91□□□□□ -0.5
BRCC3-205ENST00000399026 POTEMA6NI47 508 aa11.91□□□□□ -0.5
BRCC3-205ENST00000399026 ORAI2Q96SN7 254 aa11.91□□□□□ -0.5
BRCC3-205ENST00000399026 ANKARQ7Z5J8 1434 aa11.9□□□□□ -0.5
BRCC3-205ENST00000399026 CARD11Q9BXL7 1154 aa11.9□□□□□ -0.5
BRCC3-205ENST00000399026 PCDHB8Q9UN66 801 aa11.9□□□□□ -0.5
BRCC3-205ENST00000399026 PRR36Q9H6K5 1346 aa11.89□□□□□ -0.51
BRCC3-205ENST00000399026 CHRM1P11229 460 aaPredicted RBP11.89□□□□□ -0.51
BRCC3-205ENST00000399026 ESCO1Q5FWF5 840 aa11.89□□□□□ -0.51
BRCC3-205ENST00000399026 TMEM106CQ9BVX2 250 aa11.89□□□□□ -0.51
BRCC3-205ENST00000399026 PXDNQ92626 1479 aa11.89□□□□□ -0.51
BRCC3-205ENST00000399026 TRIM35Q9UPQ4 493 aa11.88□□□□□ -0.51
BRCC3-205ENST00000399026 POTEFA5A3E0 1075 aa11.87□□□□□ -0.51
BRCC3-205ENST00000399026 WASLO00401 505 aaPredicted RBP11.87□□□□□ -0.51
BRCC3-205ENST00000399026 TRPM3Q9HCF6 1732 aaPredicted RBP11.86□□□□□ -0.51
BRCC3-205ENST00000399026 POTEJP0CG39 1038 aa11.86□□□□□ -0.51
BRCC3-205ENST00000399026 XPCQ01831 940 aaPredicted RBP11.86□□□□□ -0.51
BRCC3-205ENST00000399026 POTEGQ6S5H5 508 aa11.86□□□□□ -0.51
BRCC3-205ENST00000399026 CIZ1Q9ULV3 898 aaPredicted RBP11.86□□□□□ -0.51
BRCC3-205ENST00000399026 LRP6O75581 1613 aa11.86□□□□□ -0.51
BRCC3-205ENST00000399026 USP47Q96K76 1375 aa11.85□□□□□ -0.51
BRCC3-205ENST00000399026 JCADQ9P266 1359 aa11.85□□□□□ -0.51
BRCC3-205ENST00000399026 TIMELESSQ9UNS1 1208 aa11.85□□□□□ -0.51
BRCC3-205ENST00000399026 ABCA3Q99758 1704 aa11.85□□□□□ -0.51
BRCC3-205ENST00000399026 COL22A1Q8NFW1 1626 aaPredicted RBP11.85□□□□□ -0.51
BRCC3-205ENST00000399026 PMFBP1Q8TBY8 1022 aa11.84□□□□□ -0.51
BRCC3-205ENST00000399026 CDK19Q9BWU1 502 aa11.84□□□□□ -0.51
BRCC3-205ENST00000399026 PHF8Q9UPP1 1060 aa11.84□□□□□ -0.51
BRCC3-205ENST00000399026 NPHP3Q7Z494 1330 aa11.84□□□□□ -0.51
BRCC3-205ENST00000399026 PNPLA6Q8IY17 1366 aa11.83□□□□□ -0.52
BRCC3-205ENST00000399026 FOXO3O43524 673 aa11.83□□□□□ -0.52
BRCC3-205ENST00000399026 SRPK2P78362 688 aaKnown RBP11.83□□□□□ -0.52
BRCC3-205ENST00000399026 CABP2Q9NPB3 220 aa11.83□□□□□ -0.52
BRCC3-205ENST00000399026 COLQQ9Y215 455 aaPredicted RBP11.83□□□□□ -0.52
BRCC3-205ENST00000399026 PPIP5K1Q6PFW1 1433 aa11.83□□□□□ -0.52
BRCC3-205ENST00000399026 SBNO2Q9Y2G9 1366 aa11.82□□□□□ -0.52
BRCC3-205ENST00000399026 ALS2Q96Q42 1657 aa11.82□□□□□ -0.52
BRCC3-205ENST00000399026 SOS2Q07890 1332 aaPredicted RBP11.82□□□□□ -0.52
BRCC3-205ENST00000399026 AKAP12Q02952 1782 aa11.82□□□□□ -0.52
BRCC3-205ENST00000399026 NRKQ7Z2Y5 1582 aa11.81□□□□□ -0.52
BRCC3-205ENST00000399026 TNS3Q68CZ2 1445 aa11.81□□□□□ -0.52
BRCC3-205ENST00000399026 IER5LQ5T953 404 aa11.81□□□□□ -0.52
BRCC3-205ENST00000399026 ZNF467Q7Z7K2 595 aaPredicted RBP11.81□□□□□ -0.52
BRCC3-205ENST00000399026 NUDT16Q96DE0 195 aaKnown RBP11.81□□□□□ -0.52
BRCC3-205ENST00000399026 EVC2Q86UK5 1308 aa11.81□□□□□ -0.52
BRCC3-205ENST00000399026 CRYBG1Q9Y4K1 1723 aa11.8□□□□□ -0.52
BRCC3-205ENST00000399026 ST20-MTHFSA0A0A6YYL1 179 aa11.8□□□□□ -0.52
BRCC3-205ENST00000399026 MARF1Q9Y4F3 1742 aaKnown RBP11.8□□□□□ -0.52
BRCC3-205ENST00000399026 MYOM1P52179 1685 aa11.79□□□□□ -0.52
BRCC3-205ENST00000399026 SEC24BO95487 1268 aa11.79□□□□□ -0.52
BRCC3-205ENST00000399026 MON2Q7Z3U7 1717 aa11.79□□□□□ -0.52
BRCC3-205ENST00000399026 DISP3Q9P2K9 1392 aa11.79□□□□□ -0.52
BRCC3-205ENST00000399026 NGDNQ8NEJ9 315 aaKnown RBP11.78□□□□□ -0.52
BRCC3-205ENST00000399026 LRRC59Q96AG4 307 aaKnown RBP11.78□□□□□ -0.52
BRCC3-205ENST00000399026 PHRF1Q9P1Y6 1649 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms