RNA–Protein interactions for RNA: ENST00000398532.8

MSL1-202, Transcript of male specific lethal 1 homolog, humanhuman

TSL 1 (best) BASIC

Gene MSL1, Length 4,707 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL1-202ENST00000398532 IDI1Q13907 227 aa22.16■■□□□ 1.14
MSL1-202ENST00000398532 HDGFL1Q5TGJ6 251 aa22.16■■□□□ 1.14
MSL1-202ENST00000398532 CCDC34Q96HJ3 373 aa22.16■■□□□ 1.14
MSL1-202ENST00000398532 NUP153P49790 1475 aaKnown RBP22.15■■□□□ 1.14
MSL1-202ENST00000398532 ADGRL1O94910 1474 aa22.15■■□□□ 1.14
MSL1-202ENST00000398532 ESCO1Q5FWF5 840 aa22.15■■□□□ 1.14
MSL1-202ENST00000398532 NUDT16Q96DE0 195 aaKnown RBP22.14■■□□□ 1.14
MSL1-202ENST00000398532 MRE11P49959 708 aa22.14■■□□□ 1.13
MSL1-202ENST00000398532 RABEP1Q15276 862 aa22.14■■□□□ 1.13
MSL1-202ENST00000398532 BECN2A8MW95 431 aa22.13■■□□□ 1.13
MSL1-202ENST00000398532 ZNF428Q96B54 188 aa22.13■■□□□ 1.13
MSL1-202ENST00000398532 NKTRP30414 1462 aaKnown RBP22.13■■□□□ 1.13
MSL1-202ENST00000398532 CD109Q6YHK3 1445 aa22.13■■□□□ 1.13
MSL1-202ENST00000398532 SCAF11Q99590 1463 aaKnown RBP22.13■■□□□ 1.13
MSL1-202ENST00000398532 GOLGA6L19H0YKK7 550 aa22.12■■□□□ 1.13
MSL1-202ENST00000398532 ATP10BO94823 1461 aa22.12■■□□□ 1.13
MSL1-202ENST00000398532 LRRFIP1Q32MZ4 808 aaKnown RBP22.11■■□□□ 1.13
MSL1-202ENST00000398532 NEUROD6Q96NK8 337 aa22.11■■□□□ 1.13
MSL1-202ENST00000398532 GPRASP1Q5JY77 1395 aa22.1■■□□□ 1.13
MSL1-202ENST00000398532 DCTN1Q14203 1278 aa22.1■■□□□ 1.13
MSL1-202ENST00000398532 BICD2Q8TD16 824 aa22.1■■□□□ 1.13
MSL1-202ENST00000398532 CHMP4CQ96CF2 233 aa22.1■■□□□ 1.13
MSL1-202ENST00000398532 ATF3P18847 181 aa22.1■■□□□ 1.13
MSL1-202ENST00000398532 CNTROBQ8N137 903 aa22.1■■□□□ 1.13
MSL1-202ENST00000398532 CCT4P50991 539 aaKnown RBP22.09■■□□□ 1.13
MSL1-202ENST00000398532 SYTL4Q96C24 671 aaPredicted RBP22.09■■□□□ 1.13
MSL1-202ENST00000398532 APPP05067 770 aa22.09■■□□□ 1.13
MSL1-202ENST00000398532 PLEKHO1Q53GL0 409 aaPredicted RBP22.09■■□□□ 1.13
MSL1-202ENST00000398532 FBXO31Q5XUX0 539 aaPredicted RBP22.09■■□□□ 1.13
MSL1-202ENST00000398532 CAVIN1Q6NZI2 390 aaKnown RBP22.09■■□□□ 1.13
MSL1-202ENST00000398532 THEMISQ8N1K5 641 aaPredicted RBP22.09■■□□□ 1.13
MSL1-202ENST00000398532 IL27Q8NEV9 243 aa22.09■■□□□ 1.13
MSL1-202ENST00000398532 RASSF8Q8NHQ8 419 aa22.09■■□□□ 1.13
MSL1-202ENST00000398532 LRPPRCP42704 1394 aaKnown RBP22.09■■□□□ 1.13
MSL1-202ENST00000398532 CPLX2Q6PUV4 134 aaKnown RBP22.09■■□□□ 1.13
MSL1-202ENST00000398532 RNF214Q8ND24 703 aa22.09■■□□□ 1.13
MSL1-202ENST00000398532 HSP90AA2PQ14568 343 aaPredicted RBP22.08■■□□□ 1.13
MSL1-202ENST00000398532 NOS1P29475 1434 aa22.08■■□□□ 1.13
MSL1-202ENST00000398532 CPLX1O14810 134 aa22.08■■□□□ 1.12
MSL1-202ENST00000398532 CREBRFQ8IUR6 639 aa22.08■■□□□ 1.12
MSL1-202ENST00000398532 NASPP49321 788 aaPredicted RBP22.07■■□□□ 1.12
MSL1-202ENST00000398532 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.07■■□□□ 1.12
MSL1-202ENST00000398532 AMER1Q5JTC6 1135 aaPredicted RBP22.07■■□□□ 1.12
MSL1-202ENST00000398532 NME9Q86XW9 330 aa22.07■■□□□ 1.12
MSL1-202ENST00000398532 EMILIN1Q9Y6C2 1016 aa22.07■■□□□ 1.12
MSL1-202ENST00000398532 RALGAPBQ86X10 1494 aa22.07■■□□□ 1.12
MSL1-202ENST00000398532 FSD1Q9BTV5 496 aa22.06■■□□□ 1.12
MSL1-202ENST00000398532 C14orf93Q9H972 538 aaKnown RBP22.06■■□□□ 1.12
MSL1-202ENST00000398532 MIS18AQ9NYP9 233 aa22.06■■□□□ 1.12
MSL1-202ENST00000398532 PRPF40AO75400 957 aaKnown RBP22.06■■□□□ 1.12
MSL1-202ENST00000398532 RAPGEF6Q8TEU7 1601 aa22.06■■□□□ 1.12
MSL1-202ENST00000398532 LRRCC1Q9C099 1032 aa22.05■■□□□ 1.12
MSL1-202ENST00000398532 MCM10Q7L590 875 aa22.05■■□□□ 1.12
MSL1-202ENST00000398532 K7ELQ4 463 aaPredicted RBP22.05■■□□□ 1.12
MSL1-202ENST00000398532 ZNF530Q6P9A1 599 aaPredicted RBP22.05■■□□□ 1.12
MSL1-202ENST00000398532 SRCIN1Q9C0H9 1055 aa22.05■■□□□ 1.12
MSL1-202ENST00000398532 FOSBP53539 338 aa22.04■■□□□ 1.12
MSL1-202ENST00000398532 FAM43AQ8N2R8 423 aa22.04■■□□□ 1.12
MSL1-202ENST00000398532 TRIM27P14373 513 aa22.03■■□□□ 1.12
MSL1-202ENST00000398532 RPAP2Q8IXW5 612 aaPredicted RBP22.03■■□□□ 1.12
MSL1-202ENST00000398532 TCOF1Q13428 1488 aaKnown RBP22.03■■□□□ 1.12
MSL1-202ENST00000398532 MCM2P49736 904 aa22.03■■□□□ 1.12
MSL1-202ENST00000398532 TRDNQ13061 729 aa22.02■■□□□ 1.12
MSL1-202ENST00000398532 SYNE3Q6ZMZ3 975 aa22.02■■□□□ 1.12
MSL1-202ENST00000398532 MCM4P33991 863 aa22.02■■□□□ 1.12
MSL1-202ENST00000398532 TESK2Q96S53 571 aa22.02■■□□□ 1.12
MSL1-202ENST00000398532 DHX29Q7Z478 1369 aaKnown RBP22.02■■□□□ 1.12
MSL1-202ENST00000398532 FANCAO15360 1455 aa22.02■■□□□ 1.12
MSL1-202ENST00000398532 CCDC27Q2M243 656 aa22.02■■□□□ 1.11
MSL1-202ENST00000398532 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.02■■□□□ 1.11
MSL1-202ENST00000398532 FAM135AQ9P2D6 1515 aa22.01■■□□□ 1.11
MSL1-202ENST00000398532 ABCC11Q96J66 1382 aa22.01■■□□□ 1.11
MSL1-202ENST00000398532 AKAP17AQ02040 695 aaKnown RBP22.01■■□□□ 1.11
MSL1-202ENST00000398532 PROSER2Q86WR7 435 aaPredicted RBP22.01■■□□□ 1.11
MSL1-202ENST00000398532 PRAG1Q86YV5 1406 aa22.01■■□□□ 1.11
MSL1-202ENST00000398532 IL1RAPL2Q9NP60 686 aa22.01■■□□□ 1.11
MSL1-202ENST00000398532 IGHDP01880 384 aa22■■□□□ 1.11
MSL1-202ENST00000398532 EXOC6BQ9Y2D4 811 aa22■■□□□ 1.11
MSL1-202ENST00000398532 WASHC4Q2M389 1173 aa21.99■■□□□ 1.11
MSL1-202ENST00000398532 ALDH1L2Q3SY69 923 aa21.99■■□□□ 1.11
MSL1-202ENST00000398532 PARD3Q8TEW0 1356 aa21.99■■□□□ 1.11
MSL1-202ENST00000398532 MBD3O95983 291 aa21.98■■□□□ 1.11
MSL1-202ENST00000398532 SRGAP3O43295 1099 aa21.98■■□□□ 1.11
MSL1-202ENST00000398532 MAP4K4O95819 1239 aaPredicted RBP21.98■■□□□ 1.11
MSL1-202ENST00000398532 IFT57Q9NWB7 429 aa21.98■■□□□ 1.11
MSL1-202ENST00000398532 PSMA5P28066 241 aa21.97■■□□□ 1.11
MSL1-202ENST00000398532 FBLN1P23142 703 aa21.97■■□□□ 1.11
MSL1-202ENST00000398532 TRIM29Q14134 588 aa21.97■■□□□ 1.11
MSL1-202ENST00000398532 CTTNBP2Q8WZ74 1663 aa21.97■■□□□ 1.11
MSL1-202ENST00000398532 DNAJC2Q99543 621 aaKnown RBP21.97■■□□□ 1.11
MSL1-202ENST00000398532 CFAP43Q8NDM7 1665 aa21.96■■□□□ 1.11
MSL1-202ENST00000398532 SIL1Q9H173 461 aa21.96■■□□□ 1.11
MSL1-202ENST00000398532 FIBPO43427 364 aa21.96■■□□□ 1.11
MSL1-202ENST00000398532 RALYLQ86SE5 291 aaKnown RBP21.95■■□□□ 1.11
MSL1-202ENST00000398532 WASLO00401 505 aaPredicted RBP21.95■■□□□ 1.1
MSL1-202ENST00000398532 SASS6Q6UVJ0 657 aa21.95■■□□□ 1.1
MSL1-202ENST00000398532 FBXW7Q969H0 707 aa21.95■■□□□ 1.1
MSL1-202ENST00000398532 CWC22Q9HCG8 908 aaKnown RBP21.94■■□□□ 1.1
MSL1-202ENST00000398532 CCDC73Q6ZRK6 1079 aa21.94■■□□□ 1.1
MSL1-202ENST00000398532 ERC1Q8IUD2 1116 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms