RNA–Protein interactions for RNA: ENST00000398409.1

CST3-202, Transcript of cystatin C, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CST3, Length 832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CST3-202ENST00000398409 QRICH2Q9H0J4 1663 aa25.48■■□□□ 1.67
CST3-202ENST00000398409 CLSPNQ9HAW4 1339 aa25.47■■□□□ 1.67
CST3-202ENST00000398409 CABP2Q9NPB3 220 aa25.47■■□□□ 1.67
CST3-202ENST00000398409 PPIP5K1Q6PFW1 1433 aa25.46■■□□□ 1.67
CST3-202ENST00000398409 ALS2Q96Q42 1657 aa25.46■■□□□ 1.67
CST3-202ENST00000398409 TIMELESSQ9UNS1 1208 aa25.46■■□□□ 1.67
CST3-202ENST00000398409 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.46■■□□□ 1.67
CST3-202ENST00000398409 SBNO2Q9Y2G9 1366 aa25.45■■□□□ 1.67
CST3-202ENST00000398409 ZNF692Q9BU19 519 aaPredicted RBP25.45■■□□□ 1.66
CST3-202ENST00000398409 TOPAZ1Q8N9V7 1692 aa25.45■■□□□ 1.66
CST3-202ENST00000398409 VPS72Q15906 364 aa25.44■■□□□ 1.66
CST3-202ENST00000398409 ABTB2Q8N961 1025 aa25.43■■□□□ 1.66
CST3-202ENST00000398409 RGS12O14924 1447 aa25.43■■□□□ 1.66
CST3-202ENST00000398409 ATAD2Q6PL18 1390 aa25.43■■□□□ 1.66
CST3-202ENST00000398409 RALGAPBQ86X10 1494 aa25.42■■□□□ 1.66
CST3-202ENST00000398409 FAM83GA6ND36 823 aa25.42■■□□□ 1.66
CST3-202ENST00000398409 PLEKHG5O94827 1062 aa25.42■■□□□ 1.66
CST3-202ENST00000398409 NLRP13Q86W25 1043 aa25.42■■□□□ 1.66
CST3-202ENST00000398409 CABP1Q9NZU7 370 aa25.42■■□□□ 1.66
CST3-202ENST00000398409 NWD2Q9ULI1 1742 aa25.42■■□□□ 1.66
CST3-202ENST00000398409 UPF1Q92900 1129 aaKnown RBP eCLIP25.41■■□□□ 1.66
CST3-202ENST00000398409 PRDM11Q9NQV5 511 aa25.39■■□□□ 1.66
CST3-202ENST00000398409 ABCA3Q99758 1704 aa25.38■■□□□ 1.65
CST3-202ENST00000398409 PUS7Q96PZ0 661 aaKnown RBP25.38■■□□□ 1.65
CST3-202ENST00000398409 CCDC9Q9Y3X0 531 aaKnown RBP25.38■■□□□ 1.65
CST3-202ENST00000398409 BTG4Q9NY30 223 aa25.37■■□□□ 1.65
CST3-202ENST00000398409 COL14A1Q05707 1796 aaKnown RBP25.36■■□□□ 1.65
CST3-202ENST00000398409 CCDC125Q86Z20 511 aa25.35■■□□□ 1.65
CST3-202ENST00000398409 ONECUT3O60422 494 aaPredicted RBP25.34■■□□□ 1.65
CST3-202ENST00000398409 USP6P35125 1406 aa25.34■■□□□ 1.65
CST3-202ENST00000398409 PLCH1Q4KWH8 1693 aa25.32■■□□□ 1.64
CST3-202ENST00000398409 USP19O94966 1318 aa25.31■■□□□ 1.64
CST3-202ENST00000398409 NLRP6P59044 892 aa25.3■■□□□ 1.64
CST3-202ENST00000398409 NUTM2GQ5VZR2 741 aa25.3■■□□□ 1.64
CST3-202ENST00000398409 PCGF6Q9BYE7 350 aa25.3■■□□□ 1.64
CST3-202ENST00000398409 TTC21AQ8NDW8 1320 aa25.3■■□□□ 1.64
CST3-202ENST00000398409 CPDO75976 1380 aa25.3■■□□□ 1.64
CST3-202ENST00000398409 KIAA0232Q92628 1395 aa25.3■■□□□ 1.64
CST3-202ENST00000398409 GCP02774 474 aa25.28■■□□□ 1.64
CST3-202ENST00000398409 CRYBG1Q9Y4K1 1723 aa25.28■■□□□ 1.64
CST3-202ENST00000398409 ZC3H6P61129 1189 aaKnown RBP25.27■■□□□ 1.64
CST3-202ENST00000398409 SEPT12Q8IYM1 358 aa25.27■■□□□ 1.64
CST3-202ENST00000398409 EVA1CP58658 441 aa25.26■■□□□ 1.63
CST3-202ENST00000398409 KCNH5Q8NCM2 988 aa25.26■■□□□ 1.63
CST3-202ENST00000398409 GLI3P10071 1580 aa25.26■■□□□ 1.63
CST3-202ENST00000398409 HDGFL2Q7Z4V5 671 aaPredicted RBP25.25■■□□□ 1.63
CST3-202ENST00000398409 TERF2IPQ9NYB0 399 aa25.25■■□□□ 1.63
CST3-202ENST00000398409 PHRF1Q9P1Y6 1649 aaKnown RBP25.24■■□□□ 1.63
CST3-202ENST00000398409 SSH2Q76I76 1423 aa25.24■■□□□ 1.63
CST3-202ENST00000398409 KTN1Q86UP2 1357 aaKnown RBP25.24■■□□□ 1.63
CST3-202ENST00000398409 NINLQ9Y2I6 1382 aa25.24■■□□□ 1.63
CST3-202ENST00000398409 SPATA31A5Q5VU36 1347 aa25.24■■□□□ 1.63
CST3-202ENST00000398409 SPATA31A7Q8IWB4 1347 aa25.24■■□□□ 1.63
CST3-202ENST00000398409 CPSF1Q10570 1443 aaKnown RBP25.23■■□□□ 1.63
CST3-202ENST00000398409 TTC21BQ7Z4L5 1316 aa25.23■■□□□ 1.63
CST3-202ENST00000398409 ST20-MTHFSA0A0A6YYL1 179 aa25.22■■□□□ 1.63
CST3-202ENST00000398409 A0A0G2JS52 829 aa25.22■■□□□ 1.63
CST3-202ENST00000398409 MYT1Q01538 1121 aa25.22■■□□□ 1.63
CST3-202ENST00000398409 TMC1Q8TDI8 760 aa25.22■■□□□ 1.63
CST3-202ENST00000398409 CHRNA2Q15822 529 aa25.21■■□□□ 1.63
CST3-202ENST00000398409 CDCA8Q53HL2 280 aa25.21■■□□□ 1.63
CST3-202ENST00000398409 KRT27Q7Z3Y8 459 aa25.21■■□□□ 1.63
CST3-202ENST00000398409 NRAPQ86VF7 1730 aa25.2■■□□□ 1.63
CST3-202ENST00000398409 TMF1P82094 1093 aa25.19■■□□□ 1.62
CST3-202ENST00000398409 FAM98CQ17RN3 349 aaKnown RBP25.19■■□□□ 1.62
CST3-202ENST00000398409 STRN4Q9NRL3 753 aa25.19■■□□□ 1.62
CST3-202ENST00000398409 NRKQ7Z2Y5 1582 aa25.18■■□□□ 1.62
CST3-202ENST00000398409 SF3B2Q13435 895 aaKnown RBP25.18■■□□□ 1.62
CST3-202ENST00000398409 SPATA31A1Q5TZJ5 1347 aa25.17■■□□□ 1.62
CST3-202ENST00000398409 TESK2Q96S53 571 aa25.17■■□□□ 1.62
CST3-202ENST00000398409 THRAP3Q9Y2W1 955 aaKnown RBP25.17■■□□□ 1.62
CST3-202ENST00000398409 AKAP12Q02952 1782 aa25.17■■□□□ 1.62
CST3-202ENST00000398409 AATKQ6ZMQ8 1374 aa25.17■■□□□ 1.62
CST3-202ENST00000398409 BARGINQ6ZT62 677 aa25.15■■□□□ 1.62
CST3-202ENST00000398409 CCER1Q8TC90 406 aaPredicted RBP25.15■■□□□ 1.62
CST3-202ENST00000398409 SLIT3O75094 1523 aa25.15■■□□□ 1.62
CST3-202ENST00000398409 USP47Q96K76 1375 aa25.15■■□□□ 1.62
CST3-202ENST00000398409 BLMP54132 1417 aaPredicted RBP25.13■■□□□ 1.61
CST3-202ENST00000398409 SLC12A5Q9H2X9 1139 aa25.13■■□□□ 1.61
CST3-202ENST00000398409 EDC4Q6P2E9 1401 aaKnown RBP25.12■■□□□ 1.61
CST3-202ENST00000398409 USP31Q70CQ4 1352 aa25.12■■□□□ 1.61
CST3-202ENST00000398409 TCP11L2Q8N4U5 519 aa25.11■■□□□ 1.61
CST3-202ENST00000398409 PIK3C2AO00443 1686 aa25.1■■□□□ 1.61
CST3-202ENST00000398409 C11orf95C9JLR9 678 aaPredicted RBP25.1■■□□□ 1.61
CST3-202ENST00000398409 ARHGEF25Q86VW2 580 aa25.1■■□□□ 1.61
CST3-202ENST00000398409 CAMTA1Q9Y6Y1 1673 aa25.1■■□□□ 1.61
CST3-202ENST00000398409 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.09■■□□□ 1.61
CST3-202ENST00000398409 MON2Q7Z3U7 1717 aa25.09■■□□□ 1.61
CST3-202ENST00000398409 LARP1Q6PKG0 1096 aaKnown RBP25.08■■□□□ 1.61
CST3-202ENST00000398409 BRWD3Q6RI45 1802 aa25.07■■□□□ 1.6
CST3-202ENST00000398409 LMO7Q8WWI1 1683 aa25.07■■□□□ 1.6
CST3-202ENST00000398409 ZBTB7CA1YPR0 619 aa25.07■■□□□ 1.6
CST3-202ENST00000398409 USP35Q9P2H5 1018 aa25.07■■□□□ 1.6
CST3-202ENST00000398409 CRB1P82279 1406 aa25.06■■□□□ 1.6
CST3-202ENST00000398409 COL5A2P05997 1499 aaPredicted RBP25.06■■□□□ 1.6
CST3-202ENST00000398409 CD163L1Q9NR16 1453 aa25.06■■□□□ 1.6
CST3-202ENST00000398409 PDE3BQ13370 1112 aa25.05■■□□□ 1.6
CST3-202ENST00000398409 FAM196AQ6ZSG2 479 aa25.05■■□□□ 1.6
CST3-202ENST00000398409 CDCA7Q9BWT1 371 aaPredicted RBP25.05■■□□□ 1.6
CST3-202ENST00000398409 A0A1W2PP64 1363 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms